KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:05 2014 Check: 00 .. Name: ENSTTRP00000002073/1-386 Len: 483 Check: 684 Weight: 1.00 Name: BACU000603/1-470 Len: 483 Check: 4427 Weight: 1.00 Name: bmy_12288T0/1-480 Len: 483 Check: 836 Weight: 1.00 Name: ENSP00000262633/1-480 Len: 483 Check: 3474 Weight: 1.00 Name: ENSBTAP00000017884/1-448 Len: 483 Check: 7268 Weight: 1.00 // 1 50 ENSTTRP00000002073/1-386 MAGAGPAPGL PGAGGPVVPG PGAGIPGKSG EERLKEMEAE MALFEQEVLG BACU000603/1-470 MAGAGPAPGL PGAGGPVVPG PGAGIPGKSG EERLKEMEAE MALFEQEVLG bmy_12288T0/1-480 MAGAGPAPGL PGAGGPVVPG PGAGIPGKSG EERLKEMEAE MALFEQEVLG ENSP00000262633/1-480 MAGAGPAPGL PGAGGPVVPG PGAGIPGKSG EERLKEMEAE MALFEQEVLG ENSBTAP00000017884/1-448 MAGAGPAPGL PGAGGPVVPG PGAGIPGKSG EERLKEMEAE MALFEQEVLG 51 100 ENSTTRP00000002073/1-386 APVTGIPTAV PA---VPTVP TVEAMQVPAA PVIRPIIATN TYQQXXXXXX BACU000603/1-470 APVTGIPTAV PA---VPTVP TVEAMQVPAA PVIRPIIATN TYQQVQQTLE bmy_12288T0/1-480 APVTGIPTAV PA---VPTVP TVEAMQVPAA PVIRPIIATN TYQQVQQTLE ENSP00000262633/1-480 APVPGIPTAV PAVPTVPTVP TVEAMQVPAA PVIRPIIATN TYQQVQQTLE ENSBTAP00000017884/1-448 APVTGIPTAV PA---VPTVP TVEAMQVPAA PVIRPIIATN TYQQVQQTLE 101 150 ENSTTRP00000002073/1-386 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXAA BACU000603/1-470 ARAAAAATVV PPMVGGPPFV GPVGFGPGDR SHLDSPEARE AMFLRRAAAA bmy_12288T0/1-480 ARAAAAATVV PPMVGGPPFV GPVGFGPGDR SHLDSPEARE AMFLRRAAAA ENSP00000262633/1-480 ARAAAAATVV PPMVGGPPFV GPVGFGPGDR SHLDSPEARE AMFLRRAAVA ENSBTAP00000017884/1-448 ARAAAAATVV PPMVGGPPFV GPVGFGPGDR SHLDSPEARE AMFLRRAAA- 151 200 ENSTTRP00000002073/1-386 PQRAPILHPA FIPHVLQRAD SALSST---A GGPRPMALRP PHQALVGPPL BACU000603/1-470 PQRAPILHPA FIPHVLQRA- ---------A GGPRPMALRP PHQALVGPPL bmy_12288T0/1-480 PQRAPILHPA FIPHVLQRAG EGARVTILPP GGPRPMALRP PHQALVGPPL ENSP00000262633/1-480 PQRAPILRPA FVPHVLQRAD SALSSA---A AGPRPMALRP PHQALVGPPL ENSBTAP00000017884/1-448 ---------- ---------- ---------- -GPRPMALRP PHQALVGPPL 201 250 ENSTTRP00000002073/1-386 PGPPGPPMML PPMARAPGPP LGSMAALRPP LEEPAAPREL GLGLGLGLKE BACU000603/1-470 PGPPGPPMML PPMARAPGPP LGSMAALRPP LEEPAAPREL GLGLGLGLKE bmy_12288T0/1-480 PGPPGPPMML PPMARAPGPP LGSMAALRPP LEEPAAPREL GLGLGLGLKE ENSP00000262633/1-480 PGPPGPPMML PPMARAPGPP LGSMAALRPP LEEPAAPREL GLGLGLGLKE ENSBTAP00000017884/1-448 PGPPGPPMML PPMARAPGPP LGSMAALRPP LEEPATPREL GLGLGLGLKE 251 300 ENSTTRP00000002073/1-386 KEEAVVAAAA GLEEAGTAVA VGAGGTPAGP AVIGPSLPLA LAMPLPEPEP BACU000603/1-470 KEEAVVAAAA GLEEAGAAVA VGAGGTPAGP AVIGPSLPLA LAMPLPEPEP bmy_12288T0/1-480 KEEAVVAAAA GLEEAGAAVA VGAGGTPAGP AVIGPSLPLA LAMPLPEPEP ENSP00000262633/1-480 KEEAVVAAAA GLEEASAAVA VGAGGAPAGP AVIGPSLPLA LAMPLPEPEP ENSBTAP00000017884/1-448 KEEAVVAAAA GLEEASAAVA VGAGGAPAGP AVIGPSLPLA LAMPLPEPEP 301 350 ENSTTRP00000002073/1-386 LPLPLEVVRG LLPPLRIPEL LSLRPRPRPP RPEPPPGLMA LEVPEPLGED BACU000603/1-470 LPLPLEVVRG LLPPLRIPEL LSLRPRPRPP RPEPPPGLMA LEVPEPLGED bmy_12288T0/1-480 LPLPLEVVRG LLPPLRIPEL LSLRPRPRPP RPEPPPGLMA LEVPEPLGED ENSP00000262633/1-480 LPLPLEVVRG LLPPLRIPEL LSLRPRPRPP RPEPPPGLMA LEVPEPLGED ENSBTAP00000017884/1-448 LPLPLEVVRG LLPPLRIPEL LSLRPRPRPP RPEPPPGLMA LEVPEPLSED 351 400 ENSTTRP00000002073/1-386 KKKGKPEKLK RCIRTAAGSS WEDPSLLEWD ADDF-IFCGD LGN------- BACU000603/1-470 KKKGKPEKLK RCIRTAAGSS WEDPSLLEWD ADDFRIFCGD LGNEVNDDIL bmy_12288T0/1-480 KKKGKPEKLK RCIRTAAGSS WEDPSLLEWD ADDFRIFCGD LGNEVNDDIL ENSP00000262633/1-480 KKKGKPEKLK RCIRTAAGSS WEDPSLLEWD ADDFRIFCGD LGNEVNDDIL ENSBTAP00000017884/1-448 KKKGKPEKLK RCIRTAAGSS WEDPSLLEWD ADDFRIFCGD LGNEVNDDIL 401 450 ENSTTRP00000002073/1-386 ---------- ---------- ---------- ---------- ---------- BACU000603/1-470 ARAFSRFPSF LKAKVIRDKR TGKTKGYGFV SFKDPSDYVR AMREMNGKYV bmy_12288T0/1-480 ARAFSRFPSF LKAKVIRDKR TGKTKGYGFV SFKDPSDYVR AMREMNGKYV ENSP00000262633/1-480 ARAFSRFPSF LKAKVIRDKR TGKTKGYGFV SFKDPSDYVR AMREMNGKYV ENSBTAP00000017884/1-448 ARAFSRFPSF LKAKVIRDKR TGKTKGYGFV SFKDPSDYVR AMREMNGKYV 451 500 ENSTTRP00000002073/1-386 ---------- ---------- ---------- --- BACU000603/1-470 GSRPIKLRKS MWKDRNLDVV RKKQKEKKKL GLR bmy_12288T0/1-480 GSRPIKLRKS MWKDRNLDVV RKKQKEKKKL GLR ENSP00000262633/1-480 GSRPIKLRKS MWKDRNLDVV RKKQKEKKKL GLR ENSBTAP00000017884/1-448 GSRPIKLRKS MWKDRNLDVV RKKQKEKKKL GLR