KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:06 2014 Check: 00 .. Name: bmy_03901T0/1-294 Len: 783 Check: 5926 Weight: 1.00 Name: ENSTTRP00000000747/1-314 Len: 783 Check: 6014 Weight: 1.00 Name: ENSP00000293502/1-313 Len: 783 Check: 7685 Weight: 1.00 Name: BACU008145/1-758 Len: 783 Check: 13 Weight: 1.00 Name: ENSBTAP00000017885/1-313 Len: 783 Check: 6878 Weight: 1.00 // 1 50 bmy_03901T0/1-294 ---------- ---------- MRRHSWPQHE ISWLVGDKLQ PGSVLGDRL- ENSTTRP00000000747/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000293502/1-313 ---------- ---------- ---------- ---------- ---------- BACU008145/1-758 MWLCLVVLVG LYYLLCWYRE RQVVSHLQDK FVFITGCALG FGNPLARQLH ENSBTAP00000017885/1-313 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_03901T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000747/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000293502/1-313 ---------- ---------- ---------- ---------- ---------- BACU008145/1-758 LQGLRVLAAC LTEQGAEQLR NQTSDRLETV ILDVTKAESI TAATEWVKEH ENSBTAP00000017885/1-313 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_03901T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000747/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000293502/1-313 ---------- ---------- ---------- ---------- ---------- BACU008145/1-758 VMDRGLWGLV NNTSISMSTA PSVWLTNQDS MKILDVYLLR VIKVTLSLLS ENSBTAP00000017885/1-313 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_03901T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000747/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000293502/1-313 ---------- ---------- ---------- ---------- ---------- BACU008145/1-758 LVRKVRGRVV NVSSVMGRVS LWGEDYCMKE LSYFWVKVAM IEPGYFKTFV ENSBTAP00000017885/1-313 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_03901T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000747/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000293502/1-313 ---------- ---------- ---------- ---------- ---------- BACU008145/1-758 TSPEAISWGL QAAWDQASPE VKELYAETFL ASGMKSVGLW ETKCSQDLSL ENSBTAP00000017885/1-313 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_03901T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000747/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000293502/1-313 ---------- ---------- ---------- ---------- ---------- BACU008145/1-758 VTDCMEHALT ACHPHTRYSP GWDAKLFYLP VSYMPTFLVD LMMYWGLWGL ENSBTAP00000017885/1-313 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_03901T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000747/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000293502/1-313 ---------- ---------- ---------- ---------- ---------- BACU008145/1-758 VNNAGISTPT APNDWLTKQD SMKILDVSLL RVMEVTLSLL SLVWKARGHV ENSBTAP00000017885/1-313 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_03901T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000747/1-314 ---------- ---------- ---------- ---------- ---------- ENSP00000293502/1-313 ---------- ---------- ---------- ---------- ---------- BACU008145/1-758 VNVFSVMGLL SLLGGGYCMS KYGVEAFSDS FSRREESSSQ QAPADWGSED ENSBTAP00000017885/1-313 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_03901T0/1-294 ---------- ---------- HGACPDRRPP PHPILPWLGR QALLPPRELH ENSTTRP00000000747/1-314 ---------- ---------- MAAITD---- ----LSFMDC ---------- ENSP00000293502/1-313 ---------- ---------- MAALTD---- ----LSFMYR ---------- BACU008145/1-758 QPLLLSPEPD SSWPSPLPSA MAAITD---- ----LSFMYR ---------- ENSBTAP00000017885/1-313 ---------- ---------- MAAISD---- ----LSFMYR ---------- 451 500 bmy_03901T0/1-294 AHLPGGPHDN CNLVLNLSEK YVFITGCDSG FGNLLAMQLV DRGMRVLAAC ENSTTRP00000000747/1-314 ------TFKN CNLVHNLSDK YIFIMGCDSG FGNLLAMQLV DRGMRVLAAC ENSP00000293502/1-313 ------WFKN CNLVGNLSEK YVFITGCDSG FGNLLAKQLV DRGMQVLAAC BACU008145/1-758 ------WFKN CNLVRNLSDK YVFITGCDSG FGNLLAMQLV DRGMRVLASC ENSBTAP00000017885/1-313 ------WFKN CNLVRNLSDK YVFITGCDSG FGNLLARQLV DRGMRVLAAC 501 550 bmy_03901T0/1-294 FTEEGAQKL- ---------- ---------- -QQDTSYQLQ TTLLDVTKTE ENSTTRP00000000747/1-314 FTEEGAKKL- ---------- ---------- -QQDTSYQLE TTLLDVTKTE ENSP00000293502/1-313 FTEEGSQKL- ---------- ---------- -QRDTSYRLQ TTLLDVTKSE BACU008145/1-758 FTEEGAQKLQ XXXXXXXXXX XXXXXXXXXX XQQDTSYQLQ TTLLDVTKTE ENSBTAP00000017885/1-313 FTKEGAQKL- ---------- ---------- -QQDTSYQLQ TILLDVTKTE 551 600 bmy_03901T0/1-294 SIKAAAQWVR DQVGEQGLWA LVNNAGVGLP SGPNEWLTKE DFVKVINVNL ENSTTRP00000000747/1-314 SIKAAAQWVK DQVGEQGLWA LVNNAGVGLP NGPNEWLTKE DYVKVINVNL ENSP00000293502/1-313 SIKAAAQWVR DKVGEQGLWA LVNNAGVGLP SGPNEWLTKD DFVKVINVNL BACU008145/1-758 SIKAAAQWVR DQVGEQGLWA LVNNAGVGLP SGPNEWLTKE DFVKVVNVNL ENSBTAP00000017885/1-313 SIKAATQWVR DQVGEQGLWA LVNNAGVGLP SGPNEWLTKE DFVKVINVNL 601 650 bmy_03901T0/1-294 VGLIEVTLHM LPMVKKARGR VVNMSSSGGR VAIIGGGYCV SKFGVEAFSD ENSTTRP00000000747/1-314 VGLIEVALHK LPMVKKAQGR VIKMSSSGGH VSITGGGYCV SKFGVEAFSD ENSP00000293502/1-313 VGLIEVTLHM LPMVKRARGR VVNMSSSGGR VAVIGGGYCV SKFGVEAFSD BACU008145/1-758 VGLIEVTLHM LPMVKKARGR VVNMSSSGGR VAIIGGGYCV SKFGVEAFSD ENSBTAP00000017885/1-313 VGLIEVTLHM LPMVKKARGR VVNMSSSGGR VAVIGGGYCI SKFGVEAFSD 651 700 bmy_03901T0/1-294 SIRRELHYFG VKVSIIEPGN YRTSILGEKN MEGIEKSMCK LWERLPQETR ENSTTRP00000000747/1-314 SIRRELHYFG VKVSIIEPGN YRTSILGK-- -KDLEACMRK LWERLPQETR ENSP00000293502/1-313 SIRRELYYFG VKVCIIEPGN YRTAILGK-- -ENLESRMRK LWERLPQETR BACU008145/1-758 SIRRELHYFG VKVSIIEPGN YRTSILGKKN MEGIEKSMCK LWERLPQETR ENSBTAP00000017885/1-313 SIRRELHYFG VKVSIIEPGN FRTAILGK-- -DGLEKHMRK LWERLPPETR 701 750 bmy_03901T0/1-294 ESYGEEY--- ---------- ---------- ---------- ---------- ENSTTRP00000000747/1-314 ESYGEEYFPI YTDKLKNTMQ LAESRISEIT NSMEHATASR DPRIHYNPGL ENSP00000293502/1-313 DSYGEDYFRI YTDKLKNIMQ VAEPRVRDVI NSMEHAIVSR SPRIRYNPGL BACU008145/1-758 ESYGEEYFHT YTDKLKNTMQ LAEPRISQVT NSMEHAIVSQ NPRIRYHPGL ENSBTAP00000017885/1-313 ESYGEEYFRI YTDNLKSTMQ LADPRISEVT NSMEHAIVSR SPRIRYNPGL 751 800 bmy_03901T0/1-294 ---------- ---------- ---------- --- ENSTTRP00000000747/1-314 DVKLLYLPLA KFPSPVTDFI LRRYLPRPAD SVR ENSP00000293502/1-313 DAKLLYIPLA KLPTPVTDFI LSRYLPRPAD SV- BACU008145/1-758 DVKLLYLPLA KFPTPVTDFI LRRYLPRPAD SV- ENSBTAP00000017885/1-313 DAKLLYLPLA KFPTPVTDFI LSRYLPRPAD SV-