KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:08 2014 Check: 00 .. Name: ENSP00000305596/1-605 Len: 614 Check: 9379 Weight: 1.00 Name: ENSTTRP00000003100/1-569 Len: 614 Check: 2543 Weight: 1.00 Name: ENSBTAP00000017892/1-587 Len: 614 Check: 3824 Weight: 1.00 Name: bmy_14768T0/1-572 Len: 614 Check: 6672 Weight: 1.00 Name: BACU000778/1-587 Len: 614 Check: 8583 Weight: 1.00 // 1 50 ENSP00000305596/1-605 MSNESCLPYY TAHSYSSMSA FKTSMGDLQR QLYNRGEYNI FKYAPMFESN ENSTTRP00000003100/1-569 MSSEHLLPHY TANSYRSVGV FCTSMGDLQR QLYKGGEYDI FKYAPMFESD ENSBTAP00000017892/1-587 MSSECLLPYY TANSYRSMDV FNTSMGDLQR QLYKGGEYDI FKYAPMFESD bmy_14768T0/1-572 MSSERLLPHY TANSSRSVGV FSTSMGDLQR QLYKGGEYDI FRYAPMFESD BACU000778/1-587 MSSERLLPHY TANSSRSVGV FSTSMGDLQR QLYKGGEYDI FRYAPMFESD 51 100 ENSP00000305596/1-605 FIQINKKGEV IDVHNRVRMV TVGIVCTSPI LPLPDVMVLA QPTKICEQHV ENSTTRP00000003100/1-569 FIQISKKGEV IDLHNHVQMV TVGIASTSPL LPLPDVMLLA RPTKACEEHV ENSBTAP00000017892/1-587 FIQISKKGEV IDVHNRVRMV TVGIASTSPI LPLPDVMLLA RPTKVCEEHV bmy_14768T0/1-572 FIQISKKGEV IDVHNRVRMV TVGIASTSPL LPLPDVMLLA RPTKACEEHV BACU000778/1-587 FIQISKKGEV IDVHNRVRMV TVGIASTSPL LPLPDVMLLA RPTKVCEEHV 101 150 ENSP00000305596/1-605 RWGRFAKGRG RRPVKTLELT RLLPLKFVKI SIHDHEKQQL RLKLATGRTF ENSTTRP00000003100/1-569 RYAQITKRRG REPVKTLELT RLLPLKFVKI SIHDCEKQRL RLKLATGRTF ENSBTAP00000017892/1-587 RHTRTTKGRG RKPAKTLELT RLLPLKFVKI SIHDREKQQL RLKLATGRTF bmy_14768T0/1-572 RYARITKGRG RKPAKTLELT RLLPLKFVKI SIHDREKQHL RLKLATGRTF BACU000778/1-587 RYAQITKGRG RKPAKTLELT RLLPLKFVKI SIHDREKQHL RLKLATGRTF 151 200 ENSP00000305596/1-605 YLQLCPSSDT REDLFCYWEK LVYLLRPPVE SYCSTPTLLS GDAPP-EDNK ENSTTRP00000003100/1-569 YLQLCPSSDA REDLFFYWVK LVYLLRPPVE SCSSTPTLQT GDSATIEDPK ENSBTAP00000017892/1-587 YLQLCPSSDA REDLFCYWEK LVYLLRPPVE SCSSTPTLQT GDARILEGDK bmy_14768T0/1-572 YLQLCPSSDA REDLFFYWEK LVYLLRPPVE SCSSTPTVQT GDAVTIEDTK BACU000778/1-587 YLQLCPSSDA RDDLFFYWEK LVYLLRPPVE SCSSTPTVQT GDAVTIEDTK 201 250 ENSP00000305596/1-605 SLVAAELHRE GDQSETGLYK PCDVSAATSS A-------YA GGEGIQHASH ENSTTRP00000003100/1-569 ILVXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000017892/1-587 SLLTTELHRE RDHDAVGLHK LGDVSGASSC A-------YV GGEGDYHVPH bmy_14768T0/1-572 ILVTTELHRE RDQDEAGLHK LRDVSGATSW A-------YV GGEEIHHAPH BACU000778/1-587 TLVTTELHRE RDQDEAGLHK LRDVSGATSW A-------YV GGEEIHHAPH 251 300 ENSP00000305596/1-605 GTASAASPST STPGAAEGGA ARTAGGMAVA GTATGPRTDV AIAGAAMSPA ENSTTRP00000003100/1-569 X-------XX XXXXXXEGSA AEKTTGQVAA ETASSPGGGV AVSGVGADPA ENSBTAP00000017892/1-587 G-------ST TSLKSTEGGA AGTTSGLAVA GTTTSSGGGV AVAGVGAGSV bmy_14768T0/1-572 G-------ST AAVKSAEGSA AGMTMSLAVA GTASSPGGGV AVAGVGAGPA BACU000778/1-587 G-------ST AAVKSAGGSA AGMTPGLAVA GTASGPGGGV AVAGVGAGPA 301 350 ENSP00000305596/1-605 TGAMSIATTK SAGPGQVTTA LAGAAIKNPG ENESSKSMAG AANISSEGIS ENSTTRP00000003100/1-569 GGAVSLVAAE STGTSQVSQA LARATIRDPG ESRSGKAIA- ---------- ENSBTAP00000017892/1-587 GGAVSLAATR STSTSQVSTT LAGAAAKGSR ESGSGKAIVG AASISSEGTN bmy_14768T0/1-572 GGAASLAATK STGTSQVSMA LAGATIKDPG ESGSGKAIA- ---------- BACU000778/1-587 GGAASLAATK STGTSQVRMA LAGATIKDPG ESGSGKAIAG AATISLEDTN 351 400 ENSP00000305596/1-605 LALVGAASTS LEGTSTSMAG AASLSQDSSL SAAFAGSITT SKCAAERTEG ENSTTRP00000003100/1-569 ----GAASTS STGAD----- ----SPESSM SVVFAGAATN NKPAAGRAEG ENSBTAP00000017892/1-587 LVLAGAASTS STGMD----- ----SADSSM SVVFAGAVKT GKAAAVSAEG bmy_14768T0/1-572 ----GAARTS STGAD----- ----SPESSE SVVFAGAATT SKPAAERAEG BACU000778/1-587 LVLTGAARTS STGAD----- ----SPESSV SVEFAGAATT SKPAAGRAEG 401 450 ENSP00000305596/1-605 PAVGPLISTL QSEGYMSERD GSQKVSQPSA EVWNENKERR EKKDRHPSRK ENSTTRP00000003100/1-569 QVAAPLVSTL QSEDYMSKRD GSQISPRARD EAWKEKKKRR E-KDKSSSRK ENSBTAP00000017892/1-587 QVGAPLVSTL QSEGYMSERD GSQKVSHPRD ETRKEKKERR EKKDKSSSRK bmy_14768T0/1-572 QVAAPLVSTL QSEGYMSERD GSQKVSHPRD EDWKEKKERR EKKDKSSSRK BACU000778/1-587 QVAAPLVSTL QSEGYMSERD GSQKVSRPRD EAWKEKKERR EKKDKSSSRK 451 500 ENSP00000305596/1-605 SSHHRKAGES HRRRAGDKNQ KASSH-RSAS GHKNTRDDKK EKGYSNVRGK ENSTTRP00000003100/1-569 SFHHRRTRES HRRTGGDKTQ KSSSSPWSST SHGNSEVDKK EKGHSGTRGR ENSBTAP00000017892/1-587 SSRHRRTGEG HHRTGGEKTR KSSSH-RSVS GHGNKRDDKK EKGQSGTRGK bmy_14768T0/1-572 SSHHRRTGES HHRTGGDKTR KSSSH-WSLS GHGHSKDDKK EKGHSGTRGR BACU000778/1-587 SSHHRRTGES HHRTGGDKTR KSSSH-WSLS GHGHSKDDKK EKGHSGTRGR 501 550 ENSP00000305596/1-605 RHGSSRKSST HSSTKKESRT TQELGKNQSA SSTGALQKKA SKISSFLRSL ENSTTRP00000003100/1-569 RH-SSQRSGR HSSSA----- -----KNRSA TSSGTPSKKS NKIYSFFRSL ENSBTAP00000017892/1-587 GH-SPHKSGS HSSSGKEGRT ARKPGKSRSS TSSGTLNKRS SKISTFFRSF bmy_14768T0/1-572 GH-SSHRSGS HSSSAKGGRT ARKLGKSRSA TSSGTLSKKS SKIRSFFRSF BACU000778/1-587 GH-SSHRSGS HSSSAKAGRT ARKLGKSLSA TSSGTLSKKS SKIRSFFRSF 551 600 ENSP00000305596/1-605 RATPGSKTRV TSHDREVDIV AKMVEKQNIE AKVEKAQGGQ ELEMISGTMT ENSTTRP00000003100/1-569 RVIPGSKRTV T-HDREVDFV AKTVEERNIE AKVEKAPAGR DLE-TSGTMT ENSBTAP00000017892/1-587 RVIPGSKPMV R-HDREVDFV AKTVEKRNIE AKVEKAPVGE DVE-IHGTVT bmy_14768T0/1-572 RVIPGSKTMV T-HDREVDFV AKTVEKCNIE AKVEKAPVGR DLE-ICGTMT BACU000778/1-587 RVIPGSKTMV T-HDREVDIV AKTVEKHNIE AKVEKAPTGQ DLE-ICGTMT 601 650 ENSP00000305596/1-605 SEKTEMIVFE TKSI ENSTTRP00000003100/1-569 SEPMETIVIE TQSI ENSBTAP00000017892/1-587 SETMETIIIE TKSV bmy_14768T0/1-572 SETMETIIIE SKSI BACU000778/1-587 SETTETIIIE TKSI