KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:08 2014 Check: 00 .. Name: ENSP00000219919/1-295 Len: 295 Check: 7110 Weight: 1.00 Name: ENSBTAP00000017894/1-266 Len: 295 Check: 7349 Weight: 1.00 Name: ENSTTRP00000004860/1-256 Len: 295 Check: 2760 Weight: 1.00 Name: bmy_07709T0/1-169 Len: 295 Check: 9766 Weight: 1.00 Name: BACU001009/1-258 Len: 295 Check: 7642 Weight: 1.00 // 1 50 ENSP00000219919/1-295 MQPEGAEKGK SFKQRLVLKS SLAKETLSEF LGTFILIVLG CGCVAQAILS ENSBTAP00000017894/1-266 ---------- ---------- ---------F LSPFLFEVLG CGSVAQAVLS ENSTTRP00000004860/1-256 ---------- ---------- ---------- -------VLG CGCVAQAVLS bmy_07709T0/1-169 ---------- ---------- ---------- ---------- ---------- BACU001009/1-258 ---------- ---------- ---------- -------VLG CGSVAQAVLS 51 100 ENSP00000219919/1-295 RGRFGGVITI NVGFSMAVAM AIYVAGGVSG GHINPAVSLA MCLFGRMKWF ENSBTAP00000017894/1-266 RGHFGGIITI NTGFSMAVAM AIYVSAGVSG GHINPAVSFA LCLFGRMKWF ENSTTRP00000004860/1-256 RGRHGGIITI NIGLSMAIVM AIYVAGGVSG GHINPAVTFA MCLFGRTKWF bmy_07709T0/1-169 ---------- ---------M AIYVAGGVSG GHINPAVTFA MCLFGRMKWF BACU001009/1-258 RGRHGGIITI NTGFSLAIVM AIYVAGGVSG GHINPAVTFA MCLFGRMKWF 101 150 ENSP00000219919/1-295 KLPFYVGAQF LGAFVGAATV FGIYYDGLMS FAGGKLLIVG ENATAHIFAT ENSBTAP00000017894/1-266 KFPFYVGAQF LGAFAGAATL FGIYYDAFMS FAGGKLLIVG ENATAHIFAT ENSTTRP00000004860/1-256 KFPFYVGAQL LGAFLGAATL FGIYYDAFLS FAGGKLLVVG ENATAHIFAT bmy_07709T0/1-169 KFPFYVGAQL LGAFVGAATL FGIYYDAFLS FAGGKLLVVG ENATAHIFAT BACU001009/1-258 KFPFYVGAQL LGAFVGAATL FGIYYDAFLS FAGGKLLVVG ENATAHIFAT 151 200 ENSP00000219919/1-295 YPAPYLSLAN AFADQVVATM ILLIIVFAIF DSRNLGAPRG LEPIAIGLLI ENSBTAP00000017894/1-266 YPAPYLSLVN AFAEQVVATM FLLIVIFAIF DSRNLGVPRG LEPVVIGFLI ENSTTRP00000004860/1-256 YPAPYLSLVN AFADQVVATM FLLIVIFAIF DSRNLGVPKG LQPIVIGFLI bmy_07709T0/1-169 YPAPYLSLVN AFADQVVATM FLLIVIFAIF DSRNLEVPKG LQPIVIGFLI BACU001009/1-258 YPAPYLSLVN ALADQVVATM FLLIVIFAIF DSRNLGVPKG LQPIVIGFLI 201 250 ENSP00000219919/1-295 IVIASSLGLN SGCAMNPARD LSPRLFTALA GWGFEVFRAG NNFWWIPVVG ENSBTAP00000017894/1-266 VTIASSLGMN SGCAMNPARD LSPRLFTALA GWGFEVFTVG NNFWWIPVVG ENSTTRP00000004860/1-256 VVISSSLGMN SGCAMNPARD LSPRLFT--A AWGFEVFTAG NNFWWIPVVG bmy_07709T0/1-169 VVISSSLGMN SGCAMNPARD LSPRLFTALA GWGFEVFT-- ---------- BACU001009/1-258 VVISSSLGMN SGCAMNPARD LSPRLFTALA GWGFEVFTAG NNFWWIPVVG 251 300 ENSP00000219919/1-295 PLVGAVIGGL IYVLVIEIHH PEPDSVFKTE QSEDKPEKYE LSVIM ENSBTAP00000017894/1-266 PLVGAAAGGL VYFLLIEIHH PDPNPDLEAE QPEDKPEKYE LNAIM ENSTTRP00000004860/1-256 PFVGAMAGGL IYVLVIEIHH PDPNPDCKEE QPEDKPEKHE LNVLM bmy_07709T0/1-169 ---------- ---------- ---------- ---------- ----- BACU001009/1-258 PFVGAIIGGL IYVLVIEIHH PDPNPDYEEE QSEDKPEKHE LNVIM