KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:09 2014 Check: 00 .. Name: ENSTTRP00000000664/1-683 Len: 738 Check: 3941 Weight: 1.00 Name: BACU019262/1-692 Len: 738 Check: 6130 Weight: 1.00 Name: bmy_02555T0/1-669 Len: 738 Check: 7159 Weight: 1.00 Name: ENSP00000356426/1-693 Len: 738 Check: 6032 Weight: 1.00 Name: ENSBTAP00000017897/1-693 Len: 738 Check: 3794 Weight: 1.00 // 1 50 ENSTTRP00000000664/1-683 MAQGSHQIDF QVLHDLRQKF PEVPEVVVSR CMLQNNNNLD ACCAVLSQES BACU019262/1-692 MAQGSHQIDF QVLHDLRQKF PEVPEVVVSR CMLQNNNNLD ACCAVLSQES bmy_02555T0/1-669 ---------- -MCSEMKEE- ---------- --KRNNNNLD ACCAVLSQES ENSP00000356426/1-693 MAQGSHQIDF QVLHDLRQKF PEVPEVVVSR CMLQNNNNLD ACCAVLSQES ENSBTAP00000017897/1-693 MAQGSHQIDF QVLHDLRQKF PEVPEVVVSR CMLQNNNNLD ACCAVLSQES 51 100 ENSTTRP00000000664/1-683 TRYLYGEGDL NFSDDSGISG LRNHMTSLNL DLQSQNVYHH GREGNRMNGS BACU019262/1-692 TRYLYGEGDL NFSDDSGISG LRNHMTSLNL DLQSQNVYHH GREGNRMNGS bmy_02555T0/1-669 TRYLYGEGDL NFSDDSGISG LRNHMTSLNL DLQSQNVYHH GREGNRMNGS ENSP00000356426/1-693 TRYLYGEGDL NFSDDSGISG LRNHMTSLNL DLQSQNIYHH GREGSRMNGS ENSBTAP00000017897/1-693 TRYLYGEGDL NFSDDSGISG LRNHMTSLNL DLQSQNVYHH GREGNRMNGS 101 150 ENSTTRP00000000664/1-683 RTLTHSISDG QLQGGQSNNE LFQQEPQTAP AQVPQGFNVF GMSSTSGASN BACU019262/1-692 RTLTHSISDG QLQGGQSNNE LFQQEPQTAP AQVPQGFNVF GMSSTSGASN bmy_02555T0/1-669 RTLTHSISDG QLQGGQSNNE LFQQEPQTAP AQVPQGFNVF GMSSTSGASN ENSP00000356426/1-693 RTLTHSISDG QLQGGQSNSE LFQQEPQTAP AQVPQGFNVF GMSSSSGASN ENSBTAP00000017897/1-693 RTLTHSISDG QLQGGQSNNE LFQQEPQTAP AQVPQGFNVF GMSSASGASN 151 200 ENSTTRP00000000664/1-683 SAPHLGFHLG SKGTSNLSQQ TPRFNPIMVT LAPNIQTGRN TPT-LHIHXX BACU019262/1-692 SAPHLGFHLG SKGTSNLSQQ TPRFNPIMVT LAPNIQTGRN TPTSLHIHGV bmy_02555T0/1-669 SAPHLGFHLG SKGTSNLSQQ TPRFNPIMVT LAPNIQTGRN TPTSLHIHGV ENSP00000356426/1-693 SAPHLGFHLG SKGTSSLSQQ TPRFNPIMVT LAPNIQTGRN TPTSLHIHGV ENSBTAP00000017897/1-693 SAPHLGFHLG SKGTSNLSPQ TPRFNPIMVT LAPNIQTGRN TPTSLHIHGV 201 250 ENSTTRP00000000664/1-683 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019262/1-692 PPPVLNSPQG NSIYIRPYIT TPSGTTRQTQ QHSGWVSQFN PMNPQQVYQP bmy_02555T0/1-669 PPPVLNSPQG NSIYIRPYIT TPSGTTRQTQ QHSGWVSQFN PMNPQQVYQP ENSP00000356426/1-693 PPPVLNSPQG NSIYIRPYIT TPGGTTRQTQ QHSGWVSQFN PMNPQQVYQP ENSBTAP00000017897/1-693 PPPVLNSPQG NSIYIRPYIT TPSGTTRQTQ QHSGWVSQFN PMNPQQVYQP 251 300 ENSTTRP00000000664/1-683 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVYMP--SP TTQHI----- BACU019262/1-692 SQAGPWTTYP ASNPLPHTSA QQPNQQGHQT SHVYMPISSP TTPQPPTIHS bmy_02555T0/1-669 SQAGPWTTYP ASNPLPHTSA QQPNQQGHQT SHVYMPISSP TTPQPPTIHS ENSP00000356426/1-693 SQPGPWTTCP ASNPLSHTSS QQPNQQGHQT SHVYMPISSP TTSQPPTIHS ENSBTAP00000017897/1-693 SQPGPWTTYP ASSPLPHTSA QQPNQQGHQT SHVYMPISSP TTPQPPTIHS 301 350 ENSTTRP00000000664/1-683 --SSSQSAHS QYNIQNISTG PRKNQIEIKL EPPQRSSSSK LRSSGPRTSS BACU019262/1-692 SGSSQSSTHS QYNIQNISTG PRKNQIEIKL EPPQRSSSSK LRSSGPRTSS bmy_02555T0/1-669 SGSSQSSTHS QYNIQNISTG PRKNQIEIKL EPPQRSSSSK LRSSGPRTSS ENSP00000356426/1-693 SGSSQSSAHS QYNIQNISTG PRKNQIEIKL EPPQRNNSSK LRSSGPRTSS ENSBTAP00000017897/1-693 SGSSQSSAHS QYNIQNISTG PRKNQIEIKL EPPQRNNSSK LRSSGPRTSS 351 400 ENSTTRP00000000664/1-683 SSSSVNSQTL NRNQPTVYIA ASPPNTDEVM SRSQPKVYIS ANATTGDEQV BACU019262/1-692 R--------- ---------- ---------- ---------- ------DEQV bmy_02555T0/1-669 SSSSVNSQTL NRNQPTVYIA ASPPNTDEVM SRSQPKVYIS ANATTGDEQV ENSP00000356426/1-693 TSSSVNSQTL NRNQPTVYIA ASPPNTDELM SRSQPKVYIS ANAATGDEQV ENSBTAP00000017897/1-693 SSSSVNSQTL NRNQPTVYIA ASPPNTDEVM SRSQPKVYIS ANAAAGDEQV 401 450 ENSTTRP00000000664/1-683 MRNQPTLFIS TNSGASAASR NMSGQVSMGP AFIHHHPPKS RAIGNNSATS BACU019262/1-692 MRNQPTLFIS TNSGASAASR NMSGQVSMGP AFIHHHPPKS RAIGNNSATS bmy_02555T0/1-669 MRNQPTLFIS TNSGASAASR NMSGQVSMGP AFIHHHPPKS RAIGNNSATS ENSP00000356426/1-693 MRNQPTLFIS TNSGASAASR NMSGQVSMGP AFIHHHPPKS RAIGNNSATS ENSBTAP00000017897/1-693 IRNQPTLFIS TNSGASAASR NMSGQVSMGP AFIHHHPPKS RAIGNNSATS 451 500 ENSTTRP00000000664/1-683 PRVVVTQPNT KYTFKITVSP NKPPAVSPGV VSPTFELTNL LNHPDHYVET BACU019262/1-692 PRVVVTQPNT KYTFKITVSP NKPPAVSPGV VSPTFELTNL LNHPDHYVET bmy_02555T0/1-669 PRVVVTQPNT KYTFKITVSP NKPPAVSPGV VSPTFELTNL LNHPDHYVET ENSP00000356426/1-693 PRVVVTQPNT KYTFKITVSP NKPPAVSPGV VSPTFELTNL LNHPDHYVET ENSBTAP00000017897/1-693 PRVVVTQPNT KYTFKITVSP NKPPAVSPGV VSPTFELTNL LNHPDHYVET 501 550 ENSTTRP00000000664/1-683 ENIQHLTDPA LAHVDRISEA RKLSMGSDDA AYTQALLVHQ KARMERLQRE BACU019262/1-692 ENIQHLTDPA LAHVDRISEA RKLSMGSDDA AYTQALLVHQ KARMERLQRE bmy_02555T0/1-669 ENIQHLTDPA LAHVDRISEA RKLSMGSDDA AYTQALLVHQ KARMERLQRE ENSP00000356426/1-693 ENIQHLTDPT LAHVDRISET RKLSMGSDDA AYTQALLVHQ KARMERLQRE ENSBTAP00000017897/1-693 ENIQHLTDPA LAHVDRISDA RKLSMGSDDA AYTQALLVHQ KARMERLQRE 551 600 ENSTTRP00000000664/1-683 LEIQKKKLDK LKSEVNEMEN NLTRRRLKRS NSISQIPSLE EMQQLRSCNR BACU019262/1-692 LEIQKKKLDK LKSEVNEMEN NLTRRRLKRS NSISQIPSLE EMQQLRSCNR bmy_02555T0/1-669 LEIQKKKLDK LKSEVNEMEN NLTRRRLKRS NSISQIPSLE EMQQLRSCNR ENSP00000356426/1-693 LEIQKKKLDK LKSEVNEMEN NLTRRRLKRS NSISQIPSLE EMQQLRSCNR ENSBTAP00000017897/1-693 LEIQKKKLDK LKSEVNEMEN NLTRRRLKRS NSISQIPSLE EMQQLRSCNR 601 650 ENSTTRP00000000664/1-683 QLQIDIDCLT KEIDLFQARG PHFNPSAIHN FYDNIGF--- ---------- BACU019262/1-692 QLQIDIDCLT KEIDLFQAR- EHQDPVSTRS LFGRQGWALR ETEDVEVCGW bmy_02555T0/1-669 QLQIDIDCLT KEIDLFQARG PHFNPSAIHN FYDNIGF--- ---------- ENSP00000356426/1-693 QLQIDIDCLT KEIDLFQARG PHFNPSAIHN FYDNIGF--- ---------- ENSBTAP00000017897/1-693 QLQIDIDCLT KEIDLFQARG PHFNPSAIHN FYDNIGF--- ---------- 651 700 ENSTTRP00000000664/1-683 ---------- ---------- -------VGP VPPKP----- KDQRSTIKTP BACU019262/1-692 SLQSKVLSSS ADFPANGSLA SVSLSARVGG SPAESGVAVA HYQRSTIKTP bmy_02555T0/1-669 ---------- ---------- -------VGP VPPKP----- KDQRSTIKTP ENSP00000356426/1-693 ---------- ---------- -------VGP VPPKP----- KDQRSIIKTP ENSBTAP00000017897/1-693 ---------- ---------- -------VGP VPPKP----- KDQRSTIKTP 701 750 ENSTTRP00000000664/1-683 KTQDTEDDEG AQWNCTACTF LNHPALIRCE QCEMPRHF BACU019262/1-692 KTQDTEDDEG AQWNCTACTF LNHPALIRCE QCEMPRHF bmy_02555T0/1-669 KTQDTEDDEG AQWNCTACTF LNHPALIRCE QCEMPRHF ENSP00000356426/1-693 KTQDTEDDEG AQWNCTACTF LNHPALIRCE QCEMPRHF ENSBTAP00000017897/1-693 KTQDTEDDEG AQWSCAACTF LNHPALIRCE QCEMPRHL