KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:09 2014 Check: 00 .. Name: ENSP00000346981/1-146 Len: 220 Check: 6932 Weight: 1.00 Name: ENSBTAP00000017899/1-149 Len: 220 Check: 3447 Weight: 1.00 Name: bmy_07305T0/1-196 Len: 220 Check: 7033 Weight: 1.00 Name: BACU016516/1-132 Len: 220 Check: 8925 Weight: 1.00 Name: ENSTTRP00000010941/1-146 Len: 220 Check: 8225 Weight: 1.00 // 1 50 ENSP00000346981/1-146 ---------- ---------- ---------- --------MS RSRLFSVTSA ENSBTAP00000017899/1-149 ---------- ---------- ---------- --------ML RSRLLSDASV bmy_07305T0/1-196 MKVHSMTFKD KQQYDFRTSG NLNFCQPPNP ENSFICSHVP PSLYVEIQTS BACU016516/1-132 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010941/1-146 ---------- ---------- ---------- --------MS RSRLLSVTSM 51 100 ENSP00000346981/1-146 ISTIGIL--- ---------- ---------- ----CLP-LF QLVLSDLPCE ENSBTAP00000017899/1-149 ISKAGIL--- ---------- ---------- ----CLP-LF QLVLSDTPCE bmy_07305T0/1-196 KCHFGVLKNR NLVFATIPGM SMDLRLTLAL EQVKITPSFV HLVLSDSPCE BACU016516/1-132 --MFGFH--- ---------- ---------- ----CSKHVF QLVLSDSPCE ENSTTRP00000010941/1-146 VSKTGIL--- ---------- ---------- ----CLP-LF QLVLSDSPCE 101 150 ENSP00000346981/1-146 EDEMCVNYND QHPNGWYIWI LLLLVLVAAL LCGAVVLCLQ CWLRRPRIDS ENSBTAP00000017899/1-149 ENEMCINYKD HYTNGWYIWF LLLIFLV-AL LCGTVIFCFQ CCLRRLKNGP bmy_07305T0/1-196 ENKM------ ---------F LLLIFLV-AL LCGAVLFCLQ WWLRKLQNGP BACU016516/1-132 ENKMCTNYKD QYTSGWYIWF LLLIFLV-AL LCGAVLFCLQ WWLRKLQNGP ENSTTRP00000010941/1-146 ENEMCTNYKD QYTNGWYIWF VLLIFLV-AL LCGAVLFCLQ CWLRKLQNGP 151 200 ENSP00000346981/1-146 HRRTMAVFA- VGDLDSIYGT EAAVSPT-VG IHLQTQTPDL YPVPAPCFGP ENSBTAP00000017899/1-149 RRRTMAVFA- VGDLDSVCGT EAAVTPT-VG MHLHTQNPEL FRA--PCFGV bmy_07305T0/1-196 QRXTMAVFA- VGDLDPVYGT EAAVNPT-VG MHLQTQNPZL YHV--AXFGA BACU016516/1-132 RRRTMAVFA- VGDLDPVYGT EAAVNPT-VG MHLQTQNPEL YHV--PCFGA ENSTTRP00000010941/1-146 RRRTMAVFAD IGDLDPVYGT ETAVNPTGIG MHLQTQNPEL YHV--PCFGA 201 250 ENSP00000346981/1-146 LGSPPPYE-- EIVKTT---- ENSBTAP00000017899/1-149 LGPPPPYEET KIKPSSDLDR bmy_07305T0/1-196 LGPPPPYE-- KILKSSXF-- BACU016516/1-132 LGPPPPYE-- KILKSSRF-- ENSTTRP00000010941/1-146 LGPPPPYE-- KILKSSR---