KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:03:13 2014 Check: 00 .. Name: ENSP00000342510/1-865 Len: 912 Check: 253 Weight: 1.00 Name: ENSBTAP00000017907/1-858 Len: 912 Check: 9939 Weight: 1.00 Name: bmy_19867T0/1-767 Len: 912 Check: 9880 Weight: 1.00 Name: BACU000030/1-905 Len: 912 Check: 8518 Weight: 1.00 // 1 50 ENSP00000342510/1-865 MAVARVDAAL PPGEGSVVNW SGQGLQKLGP NLPCEADIHT LILDKNQIIK ENSBTAP00000017907/1-858 MAAACAAAAL PPGEGSVVNW SGQGLQKLSP NLPCEADIHT LILDKNQIIK bmy_19867T0/1-767 MAVARVDAAL PLGEGSVVNW SGQGLQKLSP NLPYEVDIHT LILDKNQIIK BACU000030/1-905 MAVARVDAAL PLGEGSVINW SGQGLQKLSP NLPYEVDIHT LILDKNQIIK 51 100 ENSP00000342510/1-865 LENLEKCKRL IQLSVANNRL VRMMGVAKLT LLRVLNLPHN SIGCVEGLKE ENSBTAP00000017907/1-858 LENLEKCKRL VQLSVANNRL VRMMGVAKLT QLRVLNLPHN SIGYVEGLKE bmy_19867T0/1-767 LENLEKCKRL IQLSVANNRL VRMMGVAKLT QLRVLNLPHN SIGYVEGLKE BACU000030/1-905 LENLEKCKRL IQLSVANNRL VRMMGVAKLT QLRVLNLPHN SIGYVEGLKE 101 150 ENSP00000342510/1-865 LVHLEWLNLA GNNLKAMEQI NSCTALQHLD LSDNNISQIG DLSKLVSLKT ENSBTAP00000017907/1-858 LVHLEWLNLA GNNLKAMEQI NTCTSLQHLD LSDNNIPQIG DLSKLVSLKT bmy_19867T0/1-767 LVHLEWLNLA GNNLKAMEQI NSCTALQHLD LSDNNIPQIG DLSKLASLK- BACU000030/1-905 LVHLEWLNLA GNNLKAMEQI NSCTALQHLD LSDNNIPQIG DLSKLASLKT 151 200 ENSP00000342510/1-865 LLLHGNIITS LRMAPAYLPR SLAILSLAEN EIRDLNEISF LASLTELEQL ENSBTAP00000017907/1-858 LLLHGNIITS LRMAPAYLPR CLAILSLAEN EIRDLNEVSF LASLTELEQL bmy_19867T0/1-767 ---------- ---------- ---------- -------ISF LASLTELEQL BACU000030/1-905 LLLHGNIITS LRMAPAYLPR CLAILSLAEN EIRDLNEISF LASLTELEQL 201 250 ENSP00000342510/1-865 SIMNNPCVMA TPSIPGFDYR PYIVSWCLNL RVLDGYVISQ KE-------- ENSBTAP00000017907/1-858 SIMNNPCVMA TPSIPGFDYR PYIVSWCLSL RVLDGYMISQ KE-------- bmy_19867T0/1-767 SIMNNPCVMA TPSIPGFDYR PYIVSWCLNL RVLDGYVISQ KE-------- BACU000030/1-905 SIMNNPCVMA TPSIPGFDYR PYIVSWCLNL RVLDGYVISQ KERSLMVSAA 251 300 ENSP00000342510/1-865 ---------- ---------- ---------- ------SLKA EWLYSQGKGR ENSBTAP00000017907/1-858 ---------- ---------- ---------- ------SLKA EWLYSQGKGR bmy_19867T0/1-767 ---------- ---------- ---------- ---------- ---------- BACU000030/1-905 WSWDPCMMGS SGRWHTISRI RALGECYPFF FMSLNSSLKA EWLYSQGKGR 301 350 ENSP00000342510/1-865 AYRPGQHIQL VQYLATVCPL TSTLGLQTAE DAKLEKILSK QRFHQRQLMN ENSBTAP00000017907/1-858 AYRPGQHIQL VQYLATVCPL TSTLGLQTAE DAKLEKILSK QRFHQRQLMN bmy_19867T0/1-767 ---------- ---------- ---------- ---------- -RFHQRQLMN BACU000030/1-905 AYRPGQHIQL VQYLATVCPL TSTLGLQTAE DAKLEKILSK QRFHQRQLMN 351 400 ENSP00000342510/1-865 QSQNEELSPL VPVETRASLI PEHSSPVQDC QISQESEPVI QVNSWVGINS ENSBTAP00000017907/1-858 QSHNEESS-- -PVESRASLV PEHSSPIQDG QVVPESEPVI QVNSWVGISS bmy_19867T0/1-767 QSQNEESSSL APVETRASLV PEHSSPIQDC QVVQESEPVI QVNSWVGISS BACU000030/1-905 QSQNEESSSL APVETRASLV PEHSSPIQDC QVVQESEPVI QVNSWVGISS 401 450 ENSP00000342510/1-865 NDDQLFAVKN NFPASVHTTR YSRNDLHLED IQTDEDKLNC SLLSSESTFM ENSBTAP00000017907/1-858 HDDQSHAVKN NFPTPVHTAR YSRNDLHLED IQTDEDKLNC SLLSSESTFM bmy_19867T0/1-767 NDDHLYAVKN NFPASVHTTR YSRNDLHLED IQTDEDKLNC SLLSSESTFM BACU000030/1-905 NDDHLYAVKN NFPASVHTTR YSRNDLHLED IQTDEDKLNC SLLSSESTFM 451 500 ENSP00000342510/1-865 PVASGLSPLS PTVELRLQGI NLGLEDDGVA DESVKGLESQ -VLDKEEEQP ENSBTAP00000017907/1-858 PVASGLSPVS PTVELRLQGI NLSLEDDAAA DESVKGPENQ DLSNKEEEKA bmy_19867T0/1-767 PVASGLSPVS PTVELRLQDI NLGLEDDGAA DESVKCPENS -GSDKEGEKA BACU000030/1-905 PVASGLSPVS PTVELRLQDI NLGLEDDGAA DESVKCPENS -GSDKEGEKA 501 550 ENSP00000342510/1-865 LWAANENSVQ MMRSEINTEV NEKAGLLPCP EPTII-SAIL KDDNHSLTFF ENSBTAP00000017907/1-858 LGAANENSVQ MTKSAVGTEI NEKDGLLPCP EPTVT-SAGL KDHTHSLTSF bmy_19867T0/1-767 FWAANENSVE MTKSAISTEV NEKDGLLPCP EPTVT-NTVK KDDTHSLTSF BACU000030/1-905 FWAANENSVE MTKSAISTEV NEKDGLLPCP EPTVTNNTVK KDDTHSLTSF 551 600 ENSP00000342510/1-865 PESTEQKQSD IKKPENTQPE NKETISQATS EKLPM-ILTQ RSVALGQDKV ENSBTAP00000017907/1-858 PESVGRNVF- -----HTQPD SEEARSQTAS EKVPCRLLTQ KSVPLGQDKV bmy_19867T0/1-767 PESVGHNVF- -----HTQPD SEETMSQTAS EKLPCRVLTH RSVTLGQNKV BACU000030/1-905 PESVGHNVF- -----HTQPD SEETMSQTAS EKLPCRVLTH RSVTLGQNKV 601 650 ENSP00000342510/1-865 ALQKLNDAAT KLQACWRGFY ARNYNPQAKD VRYEIRLRRM QEHIVCLTDE ENSBTAP00000017907/1-858 ALQKLNEAAT KLQACWRGFY ARNYNPQARD VRYEIRLRRM QEHIVCLTGE bmy_19867T0/1-767 ALQKLNEAAT KLQACWRGFY ARNYNPQAKD VRYEIRLRRM QEHIVCLTDE BACU000030/1-905 ALQKLNEAAT KLQAYWRGFY ARNYNPQAKD VRYEIRLRRM QEHIVCLTDE 651 700 ENSP00000342510/1-865 IRRLRKERDE ERIKKFVQEE AFRFLWNQVR SLQVWQQTVD QRLSSWHTDV ENSBTAP00000017907/1-858 IRRLKKERDE ERIQKFVQEE AVRFLWNQVR SLQAWQQTVD QHLSSCHIDV bmy_19867T0/1-767 IRRLRKERDE ERIKKFVQEE AXRFLWNQVR SLQAWQQTVD QHLSSCRPDV BACU000030/1-905 IRRLRKERDE ERIKKFVQEE AVRFLWNQVR SLQAWQQTVD QHLSSCRPDV 701 750 ENSP00000342510/1-865 PPISSTLVPS KHPLFTQSQE SSCDQNADWF IASDVAPQEK SLPEFPDSGF ENSBTAP00000017907/1-858 PPISSTLVPS KPPLFTQSQQ PSSDQNSDWF IAPDEAPQEK SLPEFPDSGF bmy_19867T0/1-767 PPISSTLVPS NPPLFTQSQE PSSDQNSDWF IAPDEAPQEK SLPEFPDSGF BACU000030/1-905 PPISSTLVLS NPPLLTQSQE PSSDQNSDWF IAPDEAPQEK SLPEFPDSGF 751 800 ENSP00000342510/1-865 HSSLTEQVHS LQHSLDFEKS STEGSESSIM GNSIDTVRYG KESDLGDVSE ENSBTAP00000017907/1-858 HSSLTEQVHS LQDSLDFEKS STEGSESSTM GNSIDTVKYG KESDVGDVSE bmy_19867T0/1-767 HSSLTEQFHC LQHSLDFEKS STEGSESSXX GNSXDTXXYG KESDVGDVSE BACU000030/1-905 HSSLTEQVHR LQDSLDFEKS STEGSESSVM GNSTDTVKYG KESDVGDVSE 801 850 ENSP00000342510/1-865 EHGEWNKESS NNEQDNSLLE QYLTSVQQLE DADERTNFDT ETRDSKLHIA ENSBTAP00000017907/1-858 EHGEWGKEGS NNEQDNSLLE QYLTSVQQLD DADERRHFDE GMGDSKLHLP bmy_19867T0/1-767 EHGEWSKESS NNDQDNSLLE QYLXSVQQLD DADERTHFDE GTGDSKLHIA BACU000030/1-905 ERGEWSKESS NNEQDNSLLE QYLTSVQQLD DADERTRFDE GAGDSKLHIA 851 900 ENSP00000342510/1-865 CFPVQLDTLS DGASVDESHG ISPPLQGEIS QTQENSKLNA EVQGQQPECD ENSBTAP00000017907/1-858 RSPERLDVLS DSASIDVAQG VSPALQYEVS QTPENCELNA EVQGQQSERD bmy_19867T0/1-767 RSPEKLDVLS DGASVDDTHG ISPTLQBEIN QTPENCELNA EIQGQQSECD BACU000030/1-905 RSPEKLDVLS DSASVDDAHG VSPTLQDEIN QTPENCELNA EIQGQQSECG 901 950 ENSP00000342510/1-865 STFQLLHVGV TV ENSBTAP00000017907/1-858 STFQVLHVGI IV bmy_19867T0/1-767 STFQVLHVGI IV BACU000030/1-905 STFQVLHVGI IV