KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:16 2014 Check: 00 .. Name: ENSBTAP00000017924/1-444 Len: 452 Check: 2411 Weight: 1.00 Name: ENSTTRP00000002461/1-436 Len: 452 Check: 6688 Weight: 1.00 Name: ENSP00000420237/1-436 Len: 452 Check: 1030 Weight: 1.00 Name: bmy_08065T0/1-436 Len: 452 Check: 4195 Weight: 1.00 Name: BACU006798/1-436 Len: 452 Check: 4344 Weight: 1.00 // 1 50 ENSBTAP00000017924/1-444 MQSSPGGGVI RRLYPVGRRT LLVCSFILAA ALGQMNFTGD QVLRILAKNE ENSTTRP00000002461/1-436 MQGFPRGRVG RGLSPVDRQT LLVCSFVLAA ALGQMNFTGD QVLRVLAKNE ENSP00000420237/1-436 MQGTPGGGTR PGPSPVDRRT LLVFSFILAA ALGQMNFTGD QVLRVLAKDE bmy_08065T0/1-436 MQGFPGGSAG RGLSPVDRQT LLVCSFILAA ALGQMNFTGD QVLRVLAKNE BACU006798/1-436 MQGFPGGSAG RALSPVDRQT LLVCSFILAA ALGQMNFTGD QVLRVLAKNE 51 100 ENSBTAP00000017924/1-444 KQLSLLRDLE GLKPQKVDFW RGPARPSLPV DMRVPFSELK DIKAYLESHG ENSTTRP00000002461/1-436 KQLSLLRDLE GLKPKKVDFW RGPARPSLPV DMRVPFSELK DIKAYLESHG ENSP00000420237/1-436 KQLSLLGDLE GLKPQKVDFW RGPARPSLPV DMRVPFSELK DIKAYLESHG bmy_08065T0/1-436 KQLSLLRDLE GLKPQKVDFW RGPARPSLPV DMRVPFSALK DIKAYLESHG BACU006798/1-436 KQLSLLRDLE GLKPQKVDFW RGPDRPSLPV DMRVPFSALK DIKAYLESHG 101 150 ENSBTAP00000017924/1-444 LAYNIMIKDI QVLLDEEREA MAKSRRLERS TSSFSYSSYH TLEEIYTWID ENSTTRP00000002461/1-436 LAYSIMIKDI QVLLDEEREA MVKSRWLERS TSGFSYSLYH TLEEIYTWID ENSP00000420237/1-436 LAYSIMIKDI QVLLDEERQA MAKSRRLERS TNSFSYSSYH TLEEIYSWID bmy_08065T0/1-436 LAYSIMIKDI QVLLDEEREA MAKSRRLERS TSSFSYSSYH TLEEIYTWID BACU006798/1-436 LAYSIMIKDI QVLLDEEREA MAKSRRLERS TSSFSYSSYH TLEEIYTWID 151 200 ENSBTAP00000017924/1-444 TFVTEHSDVV SKLQIGHSFE NRSILVLKFS TGGSRRPAIW IDSGIHSREW ENSTTRP00000002461/1-436 NFVTDHSDIL SKIQIGHSFE NRSILVLKFS TGGSQRPAIW IDTGIHSREW ENSP00000420237/1-436 NFVMEHSDIV SKIQIGNSFE NQSILVLKFS TGGSRHPAIW IDTGIHSREW bmy_08065T0/1-436 NFVTEHSDIV SKIQIGHSFE NRSILVLKFS TGGSQRPAIW IDTGIHSREW BACU006798/1-436 NFVTEHSDIV SKIQIGHSFE NRSILVLKFS TGGSQRPAIW IDTGIHSREW 201 250 ENSBTAP00000017924/1-444 ITHATSVWIA KKIVSEYSKD RIVTDVLNAM DIFLEIVSNP DGFAYTHSMN ENSTTRP00000002461/1-436 ITRATGIWTA RKIVNEYGKD RIVTDVLNAV DIFMEIVSNP DGFAYTHSMX ENSP00000420237/1-436 ITHATGIWTA NKIVSDYGKD RVLTDILNAM DIFIELVTNP DGFAFTHSMN bmy_08065T0/1-436 ITHATGIWTA RKIVNEYGKD RIVTDVLNAM DIFMEIVSNP DGFAYTHSMN BACU006798/1-436 ITHATGIWTA RKIVNEYGKD RIVTDVLNAM DIFMEIVSNP DGFAYTHSMN 251 300 ENSBTAP00000017924/1-444 RLWRKNKSTR PGIFCIGVDL NRNWKSGFGG NGSNNNPCSE TYHGPSPQSE ENSTTRP00000002461/1-436 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX NGSDNNPCSE TYHGPSPQSE ENSP00000420237/1-436 RLWRKNKSIR PGIFCIGVDL NRNWKSGFGG NGSNSNPCSE TYHGPSPQSE bmy_08065T0/1-436 RLWRKNKSSR PGIFCIGVDL NRNWKSGFGG NGSNNNPCSE TYHGPSPQSE BACU006798/1-436 RLWRKNKSSR PGIFCIGVDL NRNWKSGFGG NGSNNNPCSE TYHGPSPQSE 301 350 ENSBTAP00000017924/1-444 PEVAAVVDFI MSHGNVKALI SIHSYSQMLM YPYGHSLEPV SNQEELMWPA ENSTTRP00000002461/1-436 PEVAAIVDFI TSHGNIKALI SIHSYSQMLM YPYGHSLEPV SNQEELCSLA ENSP00000420237/1-436 PEVAAIVNFI TAHGNFKALI SIHSYSQMLM YPYGRLLEPV SNQRELYDLA bmy_08065T0/1-436 PEVAAIVDFI MSHGNIKALI SIHSYSQMLM YPYGHSLEPV SNQEELYSLA BACU006798/1-436 PEVAAIVDFI MSHGNIKALI SIHSYSQMLM YPYGHSLEPV SNQEELYSLA 351 400 ENSBTAP00000017924/1-444 GSQLTGPMTV --------AS STPSASSSGT RGATASCCQP RRSSPRPRRH ENSTTRP00000002461/1-436 KDAVQALYGV HGIEYICGSI STTLYVASGI TVDWAYDSDI KYSFTFELRD ENSP00000420237/1-436 KDAVEALYKV HGIEYIFGSI STTLYVASGI TVDWAYDSGI KYAFSFELRD bmy_08065T0/1-436 KDAVQALYEV HGIEYIYGSI STTLYVASGI TVDWAYDSGI KYSFTFELRD BACU006798/1-436 KDAVQALYEV HGIEYIYGSI STTLYVASGI TVDWAYDSGI KYSFTFELRD 401 450 ENSBTAP00000017924/1-444 GWPFGPSWST HCIIPTDRTA EGRARGVVFF SEAWAPPETQ VMDPFPIPAL ENSTTRP00000002461/1-436 TGHYGFLMPA TQIIPTAQET ---------W MAIRTIMEHT LNHPY----- ENSP00000420237/1-436 TGQYGFLLPA TQIIPTAQET ---------W MALRTIMEHT LNHPY----- bmy_08065T0/1-436 TGHYGFLLPA TQIIPTAQET ---------W MAIRTIMEHT LNHPY----- BACU006798/1-436 TGRYGFLLPA TQIIPTAQET ---------W MAIWTIMEHT LNHPY----- 451 500 ENSBTAP00000017924/1-444 TP ENSTTRP00000002461/1-436 -- ENSP00000420237/1-436 -- bmy_08065T0/1-436 -- BACU006798/1-436 --