KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:16 2014 Check: 00 .. Name: ENSP00000220496/1-304 Len: 306 Check: 224 Weight: 1.00 Name: ENSBTAP00000017926/1-304 Len: 306 Check: 137 Weight: 1.00 Name: ENSTTRP00000010825/1-305 Len: 306 Check: 3850 Weight: 1.00 Name: bmy_09179T0/1-280 Len: 306 Check: 9996 Weight: 1.00 Name: BACU008524/1-280 Len: 306 Check: 282 Weight: 1.00 // 1 50 ENSP00000220496/1-304 MAVTKELLQM DLYALLGIEE KAADKEVKKA YRQKALSCHP DKNPDNPRAA ENSBTAP00000017926/1-304 MAVTKELLQM DLYALLGIEE KAEDKEVKKA YRQKALSCHP DKNPDNPRAA ENSTTRP00000010825/1-305 MAVTKELLQM DLYALLGIEE KATDKEVKKA YRQKALSCHP DKNPDNPRAV bmy_09179T0/1-280 ---------- ---------- ------MKKA YRQKALSCHP DKNPDNPKAA BACU008524/1-280 ---------- ---------- ------MKKA YRQKALSCHP DKNPDNPRAA 51 100 ENSP00000220496/1-304 ELFHQLSQAL EVLTDAAARA AYDKVRKAKK QAAERTQKLD EKRKKVKLDL ENSBTAP00000017926/1-304 ELFHQLSQAL EVLTDAAARA AYDKVRKAKK QAAERTQKLD ERRKKVKLDL ENSTTRP00000010825/1-305 ELFHQLSQAL EVLTDAAARA AYDKVRKAKK QAAERTQKLD ERRKKVKLDL bmy_09179T0/1-280 ELFHQLSQAL EVLTDAAARA AYDKVRKAKK QAAERTQKLD ERRKKVKLDL BACU008524/1-280 ELFHQLSQAL EVLTDAAARA AYDKVRKARK QAAERTQKLD ERRKKVKLDL 101 150 ENSP00000220496/1-304 EARERQAQAQ ES--EEEEES RSTRTLEQEI ERLREEGSRQ LEEQQRLIRE ENSBTAP00000017926/1-304 EARERQAQAL GS--EEEEES GSARTLEQEI ERLREEGSRQ LEEQQRLIRE ENSTTRP00000010825/1-305 EARERQAQAH GSDEEEEEES RSTGTLEQEI RRLREEGSRQ LEEQQRVIQE bmy_09179T0/1-280 EARERQAQAH GSDEEEEEES RSTGTLEQEI RRLREEGSRQ LEEQQRVIQE BACU008524/1-280 EARERQAQAH GSDEEEEEES RSTGTLEQEI RRLREEGSRQ LEEQQRVIQE 151 200 ENSP00000220496/1-304 QIRQERDQRL RGKAENTEGQ GTPKLKLKWK CKKEDESKGG YSKDVLLRLL ENSBTAP00000017926/1-304 QIRQEQEQRL TGMAKNPENK ETPKLKLKWK SKKEAESQGG YSRDVLLQLF ENSTTRP00000010825/1-305 QIRQEREQRL RGMAENPESK GTPKLKLKWK S-KEAKSQGG YSRDVLLRLF bmy_09179T0/1-280 QIRQEREQRL RRMAENPESK GTPKLKLKWK SKKEAKSQGG YSRDVLLRLF BACU008524/1-280 QIRQEREQRL RGMAENPESK GTPKLKLKWK SKKEAKSQGG YSRDVLLRLF 201 250 ENSP00000220496/1-304 QKYGEVLNLV LSSKKPGTAV VEFATVKAAE LAVQNEVGLV DNPLKISWLE ENSBTAP00000017926/1-304 QKYGEVLNLV LSSKKAGTAV VEFATVKAAE LAVQNEVGLV DNPLKISWLE ENSTTRP00000010825/1-305 QKYGEVLNLV LSSKKAGTAV VEFATIKAAE LAVQNEVGLV DNPLKISWLE bmy_09179T0/1-280 QKYGEVLNLV LSSKKAGTAV VEFATIKAAE LAVQNEVGLV DNPLKISWLE BACU008524/1-280 QKYGEVLNLV LSSKKAGTAV VEFATIKAAE LAVQNEVGLV DNPLKISWLE 251 300 ENSP00000220496/1-304 GQPQDAVGRS HSGLSKGSVL SERDYESLVM MRMRQAAERQ QLIARMQQED ENSBTAP00000017926/1-304 GRPQSAMGHN HPGLSRGSVV SERDYESLVM MRMRQAAERQ QLIAQMQQED ENSTTRP00000010825/1-305 GRPQSTMGPN HPGLSQGSVR SERDYESLVM MRMRQAAERQ QLIAQMQQED bmy_09179T0/1-280 GRPQSTMGPN HPGLSQGSVR SERDYESLVM MRMRQAAERQ QLIAQMQQED BACU008524/1-280 GRPQSTMGPN HPGLSQGSVR SERDYESLVM MRMRQAAERQ QLIAQMQQED 301 350 ENSP00000220496/1-304 QEGPPT ENSBTAP00000017926/1-304 QAGQPT ENSTTRP00000010825/1-305 QAGQPT bmy_09179T0/1-280 QAGQPT BACU008524/1-280 QAGQPT