KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:03:16 2014 Check: 00 .. Name: ENSP00000339976/1-450 Len: 494 Check: 5558 Weight: 1.00 Name: ENSBTAP00000017928/1-450 Len: 494 Check: 8418 Weight: 1.00 Name: bmy_18983T0/1-485 Len: 494 Check: 4636 Weight: 1.00 Name: ENSTTRP00000015729/1-450 Len: 494 Check: 4997 Weight: 1.00 // 1 50 ENSP00000339976/1-450 MSDFSEELKG PVTDDEEVET SVLSGAGMHF PWLQTYVETV AIGGKRRKDF ENSBTAP00000017928/1-450 MSDFSEELIR PTTEDEQGEP CVRSGSGMCF PWLQKHIESI ASGGKQEKDF bmy_18983T0/1-485 MSDFSEELVR PTTEDEQGEP RVPSGTGMCL PWLQKHIETI ATGGKQEKDF ENSTTRP00000015729/1-450 MSDFSEELIR PTTEDEQGEP RAPSGTGMCF PWLQKHIETI ATGGKQEKDF 51 100 ENSP00000339976/1-450 AQTTSACLSF IQEALLKHQW QQAAEYMYSY FQTLEDSDSY KRQAAPEIIW ENSBTAP00000017928/1-450 AQTTSACLNF IQEALLKHQW QRAAEYMHSY LQVLEDTDSN KRQGAPEIVW bmy_18983T0/1-485 AQTTSACLSL IQEALLKHQW QRAAEYMHSY FQILEDSDSN KRQIAPEIIW ENSTTRP00000015729/1-450 AQTTSACLSL IQEALLKHQW QRAAEYMHSY FQILEDSDSN KRQIAPEIIW 101 150 ENSP00000339976/1-450 KL-------- ---------- ---------- ---------- GSEILFYHPK ENSBTAP00000017928/1-450 RL-------- ---------- ---------- ---------- GSEILYYHPK bmy_18983T0/1-485 RLGSEILYYH PKSNVETFNT FADRMKNIGV MNYLKIIWRL GSEILYYHPK ENSTTRP00000015729/1-450 RL-------- ---------- ---------- ---------- GSEILYYHPK 151 200 ENSP00000339976/1-450 SNMESFNTFA NRMKNIGVMN YLKISLQHAL YLLHHGMLKD AKRNLSEAET ENSBTAP00000017928/1-450 SSVETFNTFA DRMKNIGITN YLKISLQHAL YLLHHGLLED ANRILTQAET bmy_18983T0/1-485 SNVETFNTFA DRMKNIGVMN YLKISLQHAL YLLHHGMLED ANRNLSQAET ENSTTRP00000015729/1-450 SSVETFNTFA DRMKNIGVMN YLKISLQHAL YLLHHGMLED ANRNLSQAET 201 250 ENSP00000339976/1-450 WRHGENTSSR EILINLIQAY KGLLQYYTWS EKKMELSKLD KDDYAYNAVA ENSBTAP00000017928/1-450 WRYGEKSSSQ EVLVNLIQAY KGLLQYYSWY KKKMELSKLD KDDYAYNTAS bmy_18983T0/1-485 WRYGEKSSSQ EVLINLIQAY KGLLQYYIWS KKKMELSQL- --------AS ENSTTRP00000015729/1-450 WRYGEKSSSQ EVLINLIQAY KGLLQYYIWS KKKMELSQLD EDDYAYNTAS 251 300 ENSP00000339976/1-450 QDVFNHSWKT SANISALIKI PGVWDPFVKS YVEMLEFYGD RDGAQEVLTN ENSBTAP00000017928/1-450 QNMLNHSWKT SINLCTLIQI PGVWDPFVKS YIEMLEFYGD QDGAREVLNN bmy_18983T0/1-485 QNMLNHSWKT SINLCALIQI PGVWDPFVKS YVEMLEFYGD QDGAREVLTN ENSTTRP00000015729/1-450 QNMLNHSWKT SINLCALIQI PGVWDPFVKS YVEMLEFYGD QDGAREVLTN 301 350 ENSP00000339976/1-450 YAYDEKFPSN PNAHIYLYNF LKRQKAPRSK LISVLKILYQ IVPSHKLMLE ENSBTAP00000017928/1-450 YAYDEKFPSN PNAHVYLYNF LKREKAPREK LISVLKILYQ IVPSHKLMLE bmy_18983T0/1-485 YAYDEKFPSN PNAHIYLYNF LKREKAPREK LISVLKILYQ IVPSHKLMLE ENSTTRP00000015729/1-450 YAYDEKFPSN PNAHIYLYNF LKREKAPREK LISVLKILYQ IVPSHKLMLE 351 400 ENSP00000339976/1-450 FHTLLRKS-- ----EKEEHR KLGLEVLFGV LDFAGCTKNI TAWKYLAKYL ENSBTAP00000017928/1-450 FHRLLRKS-- ----DKEEHH KLGLEVLFGI LDFAGCTKNI TAWKYLAKYL bmy_18983T0/1-485 FHRLLRKSAV VTIAENEEHH KLGLEVLFGV LDFAGCTKNI TAWKYLAKYL ENSTTRP00000015729/1-450 FHRLLRKS-- ----ENEEHH KLGLEVLFGV LDFAGCTKNI TAWKYLAKYL 401 450 ENSP00000339976/1-450 KNILMGNHLA WVQEEWNSRK NWWPGFHFSY FWAKSDWKED TALACEKAFV ENSBTAP00000017928/1-450 KQTLMGSHLA WVQEEWNSRK SWWPSFHFSY FWAKSNWKDD KTLACEKALV bmy_18983T0/1-485 RQTLMGSHLA WVQEEWNSRK NWWPSFHFSY FXAKSDWKED KALACEKALV ENSTTRP00000015729/1-450 RQTLMGRHLA WVQEEWNSRK NWWPSFHFSY FRAKSDWKED KALACEKALV 451 500 ENSP00000339976/1-450 AGLLLGKGCR YFRYILKQDH QILGKKIKRM KRSVKKYSIV NPRL ENSBTAP00000017928/1-450 AGLLLGKGCK YFRYISKQDH QALKKKMKQM KKSVKKYSIV NSGL bmy_18983T0/1-485 AGLLLGKGCR YFRNISKQDH QVLKKKIKQM KKSVKKYSIV NPGL ENSTTRP00000015729/1-450 AGLLLGKGCR YFRNISKQDH QVLKKKIKQI KKSVKKYSIV NPGL