KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:17 2014 Check: 00 .. Name: ENSTTRP00000010837/1-461 Len: 474 Check: 4647 Weight: 1.00 Name: ENSP00000347498/1-471 Len: 474 Check: 2610 Weight: 1.00 Name: ENSBTAP00000017930/1-399 Len: 474 Check: 7454 Weight: 1.00 Name: bmy_09178T0/1-377 Len: 474 Check: 1857 Weight: 1.00 Name: BACU008523/1-397 Len: 474 Check: 2767 Weight: 1.00 // 1 50 ENSTTRP00000010837/1-461 MNYDSQQPSR PPLVLL---- ---------G RPFPVGGLGW PARVGVERRG ENSP00000347498/1-471 MNYDSQQPPL PPLPYAGCRR ASGFPALGRG GTVPVGVWGG AGQGREGRSW ENSBTAP00000017930/1-399 ---------- ---------- ---------- ---------- ---------- bmy_09178T0/1-377 ---------- ---------- ---------- ---------- ---------- BACU008523/1-397 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010837/1-461 WEGARGPGYE PQELSSADLA APRTTMENRC YGCAVKFTLF KKEYGCKNCG ENSP00000347498/1-471 GEGPRGPGLG RRDLSSADPA VLGATMESRC YGCAVKFTLF KKEYGCKNCG ENSBTAP00000017930/1-399 ---------- ---------- -----MESRC YGCAVKFTLF KKEYGCKNCG bmy_09178T0/1-377 ---------- ---------- -----MESRC YGCAVKFTLF KKEYGCKNCG BACU008523/1-397 ---------- ---------- ---MAKSHLS SGQTCQVSL- ---YGCKNCG 101 150 ENSTTRP00000010837/1-461 RAFCSGCLSF SAAVPRAGNT QQKVCKQCHE VLTRGSAPAN ASKWSPPQNY ENSP00000347498/1-471 RAFCSGCLSF SAAVPRTGNT QQKVCKQCHE VLTRGSS-AN ASKWSPPQNY ENSBTAP00000017930/1-399 RAFCSGCLSF SAAVPRAGNT QQKVCKQCHE VLTRGSSPAS ASKWSPPQNY bmy_09178T0/1-377 RAFCSGCLSF SAAVPRAGNT QQKVCKQCHE VLTRGSSPAN ASKWSPPQNY BACU008523/1-397 RAFCSGCLSF SAAVPRAGNT QQKVCKQCHE VLTRGSSPAN ASKWSPPQNY 151 200 ENSTTRP00000010837/1-461 KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000347498/1-471 KKRVAALEAK QKPSTSQSQG LTRQDQMIAE RLARLRQENK PKLVPSQAEI ENSBTAP00000017930/1-399 KKRVAALEAK QKPSTPRSHG LTQQDQVIAE RLARLRRENK PKSVPSQAEI bmy_09178T0/1-377 KKRVAALEAK QKPSTPQSHG LTQQDQVIAE RLARLRQENK PKSVPSQAEI BACU008523/1-397 KKRVAALEAK QKPNTPQSHG LTQQDQVIAE RLARLRQENK PKSVPSQAEI 201 250 ENSTTRP00000010837/1-461 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX AHQPPDTRTQ ENSP00000347498/1-471 EARLAALKDE RQGSIPSTQE MEARLAALQG RVLPSQTPQP AHHTPDTRTQ ENSBTAP00000017930/1-399 EARLAALKDA PQGPVPSTKE MEARLAVLQG RVPSSQAPQL AHQPPDPRTQ bmy_09178T0/1-377 EARLVALRDA PQGSIPSTQE MEARLAALQG RVPPSQTPQL AHQPPDTRTQ BACU008523/1-397 EARLLALRDA PQGSIPSTQE MEARLAALQG RVPPSQTPQL ARQPPDTRTQ 251 300 ENSTTRP00000010837/1-461 AQQTQDLLTE LAAEVAIDES WERGGPAASI QNDLNQGDPG AQSTSCKGQA ENSP00000347498/1-471 AQQTQDLLTQ LAAEVAIDES WKGGGPAASL QNDLNQGGPG --STNSKRQA ENSBTAP00000017930/1-399 VQQAQDLLTQ LTAEVAIDES WEQEGPAASI QNDLNRGGPG AQSTSSRGQA bmy_09178T0/1-377 AQQAQDLLTE LAAEVAIDES WERGGPATSI QNDLNQGGPG AQSTSCKGQA BACU008523/1-397 AQQAQDLLTE LAAEVAIDES WERGGPATSI QNDLNQGGPG PQSTSCKGQA 301 350 ENSTTRP00000010837/1-461 TWSLEEEKRR LLAEAAVTLR EENTRQERIL ALAKRLAVLQ GRDPDRVTLQ ENSP00000347498/1-471 NWSLEEEKSR LLAEAALELR EENTRQERIL ALAKRLAMLR GQDPERVTLQ ENSBTAP00000017930/1-399 TWSLEEEKSR LLAEAAVELR EENTRQERIL ALAKRLAVLQ GRDPDRVTLQ bmy_09178T0/1-377 TWSLEEEKRR LLAEAAVALQ EENTRQERIL ALAKRLAVLQ GRDPDRVTLQ BACU008523/1-397 TWSLEEEKRR LLAEAAVALQ EENTRQERIL ALAKRLAVLQ GRDPDRVTLQ 351 400 ENSTTRP00000010837/1-461 DYRLPDSDDE EDEETAIQRV LQQLTEEAAL DEASGFNIPA EPALRPQAQS ENSP00000347498/1-471 DYRLPDSDDD EDEETAIQRV LQQLTEEASL DEASGFNIPA EQASRPWTQP ENSBTAP00000017930/1-399 DYYLPDSDDE EEEEKAIQRV LRQLTEEAAL DEASGFNIPV EPTPQPQDQS bmy_09178T0/1-377 DYRLPDSDDE EDEETAIQRV LQQV------ ----GPALPT RP-------- BACU008523/1-397 DYRLPDSDDE EDEETAIQRV LQQLTEEAAL DEASGFNIPA EPTLQPQAQS 401 450 ENSTTRP00000010837/1-461 CRAEPEVQAV AARPEAEEEE LPWCCICNED ATLRCASCDG DLYCVRCFRE ENSP00000347498/1-471 RGAEPEAQDV DPRPEAEEEE LPWCCICNED ATLRCAGCDG DLFCARCFRE ENSBTAP00000017930/1-399 CRAEPKAQAM ATRPEEEEEE LPWCCICNED ATLRCAGCDG DLYCNRCFRE bmy_09178T0/1-377 ----PLVQAV AARPEAEEEE LPWCCICNED ATLRCASCDG DLYCVRCFRE BACU008523/1-397 CRAEPEVQAV AARPEAEEEE LPWCCICNED ATLRCASCDG DLYCVRCFRE 451 500 ENSTTRP00000010837/1-461 GHDAFELKEH QTSAYHPQHK SREH ENSP00000347498/1-471 GHDAFELKEH QTSAYSPPRA GQEH ENSBTAP00000017930/1-399 GHDAFELKEH QTSAYQPLHK GQGH bmy_09178T0/1-377 GHDAFELKEH QTSAYHPQHK SREH BACU008523/1-397 GHDAFELKEH QTSAYHPQHK SREH