KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:17 2014 Check: 00 .. Name: ENSP00000258415/1-531 Len: 535 Check: 8693 Weight: 1.00 Name: ENSBTAP00000017935/1-534 Len: 535 Check: 7024 Weight: 1.00 Name: BACU012711/1-429 Len: 535 Check: 1143 Weight: 1.00 Name: ENSTTRP00000009440/1-447 Len: 535 Check: 306 Weight: 1.00 Name: bmy_13361T0/1-501 Len: 535 Check: 3836 Weight: 1.00 // 1 50 ENSP00000258415/1-531 MAALGCARLR WAL---RGAG RGLCPHGARA KAAIPAALPS DKATGAPGAG ENSBTAP00000017935/1-534 MGALGSARLR WALLGRRAAL PGLGSFGARA KAAIPSALPA AQAAEAPGTG BACU012711/1-429 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009440/1-447 ---------- ---------- ---------- ---------- ---------- bmy_13361T0/1-501 MDVGGLSRLS ---------- ---------- --------SW EQAESAISSG 51 100 ENSP00000258415/1-531 PGVRRRQRSL EEIPRLGQLR FFFQLFVQGY ALQLHQLQVL YKAKYGPMWM ENSBTAP00000017935/1-534 PG-DRRLRSL DELSGPGQLR LLFQLLVQGY VLHLHQLQVL NKAKYGPIWI BACU012711/1-429 ---------- ---------- ---------- --------VL NKAKYGPIWI ENSTTRP00000009440/1-447 ---------- ---------- ---------- --------VL NKAKYGPIWI bmy_13361T0/1-501 WILGNWCSPF ETTGHPSTYL LHSVLLPSSI AL------VL NKAKYGPIWI 101 150 ENSP00000258415/1-531 SYLGPQMHVN LASAPLLEQV MRQEGKYPVR NDMELWKEHR DQHDLTYGPF ENSBTAP00000017935/1-534 NRVGPQMHVH LASAPLLEQV MRQEGKYPVR DDMKLWKEHR DQQGLSYGPF BACU012711/1-429 NRLGPLIHVN LASAPLLEQV MRQEGKYPVR NDMELWKEHR DQQGLTYGPF ENSTTRP00000009440/1-447 NRLGPQIHVN LASAPLLEQV MRQEGKYPVR NDMELWKEHR DQQGLTYGPF bmy_13361T0/1-501 NRLGPQIHVN LASAPLLEQV MRQEGKYPVR NDMELWKEHR DQQGLTYGPF 151 200 ENSP00000258415/1-531 TTEGHHWYQL RQALNQRLLK PAEAALYTDA FNEVIDDFMT RLDQLRAESA ENSBTAP00000017935/1-534 TTMGEQWYRL RQTLNQRMLK PAEAALYTDA LNEVINDFMD QLKQLRAESA BACU012711/1-429 TTEGQQWYRL RQALNQRLLK PAEAALYTDA LNEVIEDFMT RLNQQRAESA ENSTTRP00000009440/1-447 TMQGHQWYRL RQALNQRLLK PAEAALYTDA LNEVIEDFMT RLNQQRAESA bmy_13361T0/1-501 TTEGQQWYRL RQALNQRLLK PAEAALYTDA LNEVIEDFMT RLNQQRSESA 201 250 ENSP00000258415/1-531 SGNQVSDMAQ LFYYFALEAI CYILFEKRIG CLQRSIPEDT VTFVRSIGLM ENSBTAP00000017935/1-534 SGDHVPDIAH QFYFFALEAI SYILFEKRIG CLERSIPKDT ETFVRSVGLM BACU012711/1-429 SGDHVPDIAH HFYFFALEAV CYVLFEKRIG CLERSIPQDT KTFVRSVGLM ENSTTRP00000009440/1-447 SGDHVPDIAH NFYFFALEAV CYILFEKRIG CLERSIPQDT ETFVRSVGLM bmy_13361T0/1-501 SGDHVPDIAH HFYFFALEAV CYVLFEKRIG CLERSIPQDT KTFVRSVGLM 251 300 ENSP00000258415/1-531 FQNSLYATFL PKWTRPVLPF WKRYLDGWNA IFSFGKKLID EKLEDMEAQL ENSBTAP00000017935/1-534 FHNSLFVTFL PTWTRPLLPF WKRYLDGWNT IFSFGKKLID QKLEEIEAQL BACU012711/1-429 FQNSLYATFL PKWTRSLLPF WRRYLDGWNT IFSFGKKLID QKLEEIEAQL ENSTTRP00000009440/1-447 FQNSLYATFL PKWTRSLLPF WRRYLDGWNT IFSFGKKLID QKLEEIEAQL bmy_13361T0/1-501 FQNSLYATFL PKWTRSLLPF WRRYLDGWNT IFSFGKKLID QKLEEIEAQL 301 350 ENSP00000258415/1-531 QAAGPDGIQV SGYLHFLLAS GQLSPREAMG SLPELLMAGV DTTSNTLTWA ENSBTAP00000017935/1-534 KTENPEKTQI SGYLHFLLTS GQLSPREAEG SLPELLLAGV DTTSNTLTWA BACU012711/1-429 QTGGPEKAQI SEI------- ---------- -FPHFISYST SQTSNTLTWA ENSTTRP00000009440/1-447 QTGGPEKAHI SGYLHFLLTS GQLSPRDAEG SLPELLMAGV DTTSNTLTWA bmy_13361T0/1-501 QTGGPEKAQI SGYLHFLLTS GQLSPRDAEG SLPELLMAGV DTTSNTLTWA 351 400 ENSP00000258415/1-531 LYHLSKDPEI QEALHEEVVG VVPAGQVPQH KDFAHMPLLK AVLKETLRLY ENSBTAP00000017935/1-534 LYHLSKNPEI QAALHKEVVG VVPAGQVPQH KDLARMPLLK AVLKETLRLY BACU012711/1-429 LYHLSKNPEI QAALHEEVVG MVPAGQVPQH KDFAHMPLLK AVLKETLRLY ENSTTRP00000009440/1-447 LYHLSKNPEI QAALHEEVVG MVPAGQVPQY KDFAHMPLLK AVLKETLRLY bmy_13361T0/1-501 LYHLSKNPEI QAALHEEVVG VVPAGQVPQH KDFAHMPLLK AVLKETLRLY 401 450 ENSP00000258415/1-531 PVVPTNSRII -EKEIEVDGF LFPKNTQFVF CHYVVSRDPT AFSEPESFQP ENSBTAP00000017935/1-534 PVVPVNSRVV VDKEIEVGGF LFPKNTQFVL CHYVISRDPD IYPEPDSFQP BACU012711/1-429 PVVPVNSRVI TDKEIEVGGF LFPKNTQFVF CHYVVSRDPC IFPEPDSFQP ENSTTRP00000009440/1-447 PVVPVNSRVI VDKEIEVGGF LFPKNTQFVF CHYVVSRDPR IFPEPDSFQP bmy_13361T0/1-501 PVVPVNSRVI TDKEIEVGGF LFPKNTQFVF CHYVVSRDPC VFPEPDSFQP 451 500 ENSP00000258415/1-531 HRWLRNSQPA TPRIQHPFGS VPFGYGVRAC LGRRIAELEM QLLLARLIQK ENSBTAP00000017935/1-534 QRWLRKNQPD ALKTQHPFGS VPFGYGVRAC LGRRIAELEM QLLLTRLIQH BACU012711/1-429 QRWLRKKQPD ALRAQHPFGS VPFGYGVRAC LGRRIAELEM QLLLTRLIQQ ENSTTRP00000009440/1-447 QRWLRKNQPD ALRAQHPFGS VPFGYGVRAC LGRRVAELEM QLLLTRLIQQ bmy_13361T0/1-501 QRWLRKNQPD ALRAQHPFGS VPFGYGVRAC LGRRIAELEM QLLLTRLIQQ 501 550 ENSP00000258415/1-531 YKVVLAPETG ELKSVARIVL VPNKKVGLQF LQRQC ENSBTAP00000017935/1-534 YEVVLAPETG EVTSVARIVL VPNKKVGLRF LQRQS BACU012711/1-429 YEVALAPETG EVTSVARIVL VPNKKVGLRF LQRQS ENSTTRP00000009440/1-447 YEVALAPETG EVTSVARIVL VPNKKVGLRF LQRQS bmy_13361T0/1-501 YEVALAPETG EVTSVARIVL VPNKKVGLRF LQRQS