KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:18 2014 Check: 00 .. Name: ENSTTRP00000006939/1-443 Len: 443 Check: 8898 Weight: 1.00 Name: ENSP00000448517/1-443 Len: 443 Check: 2141 Weight: 1.00 Name: ENSBTAP00000017941/1-442 Len: 443 Check: 9350 Weight: 1.00 Name: bmy_19961T0/1-229 Len: 443 Check: 7347 Weight: 1.00 Name: BACU016439/1-327 Len: 443 Check: 3523 Weight: 1.00 // 1 50 ENSTTRP00000006939/1-443 MDCARLWLGL LLPVVAALDF SYHHQPEMEA FLKSISQNYS SITHLHSIGE ENSP00000448517/1-443 MDFPCLWLGL LLPLVAALDF NYHRQEGMEA FLKTVAQNYS SVTHLHSIGK ENSBTAP00000017941/1-442 MDCARLWLGL LMPAVAALDF SYHHQPEMEA FLKNVAQNYS SITHLHSIGK bmy_19961T0/1-229 ---------- ---------- ---------- ---------- ---------- BACU016439/1-327 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006939/1-443 SVEGRNLWVL IVGRFPNEHR IGIPEFKYVA NMHGDEAVGR ELLLHLIEYL ENSP00000448517/1-443 SVKGRNLWVL VVGRFPKEHR IGIPEFKYVA NMHGDETVGR ELLLHLIDYL ENSBTAP00000017941/1-442 SVQGRNLWVL VVGRSPKEHR IGIPEFKYVA NMHGDEAVGR ELLLHLIEYL bmy_19961T0/1-229 ---------- ---------- ---------- ------TVGR ELLLHLIEYL BACU016439/1-327 ---GRNLWVL TVGRFPKEHR IGIPEFKYVA NMHGDETVGR ELLLHLIEYL 101 150 ENSTTRP00000006939/1-443 VTSDGRDPEI TNLINSTRIH IMPSMNPDGF EAVLKPDCFY NKGRENSNFY ENSP00000448517/1-443 VTSDGKDPEI TNLINSTRIH IMPSMNPDGF EAVKKPDCYY SIGRENYNQY ENSBTAP00000017941/1-442 VTRDGRDPEI TNLINSTRIH IMPSMNPDGF ETVVKPDCFY NDGRDNSNLY bmy_19961T0/1-229 VTSDGRDPEI TNLINSTRIH IMPSMNPDGF EAVVKPDCFY SKGRENSNFY BACU016439/1-327 VTSDGRDPEI TNLINSTRIH IMPSMNPDGF EAVAKPDCFY SKGRENSNFY 151 200 ENSTTRP00000006939/1-443 DLNRNFPDAF EFNTVPRQPE TVAVMKWLNT ETFVLSANLH GGALVASYPF ENSP00000448517/1-443 DLNRNFPDAF EYNNVSRQPE TVAVMKWLKT ETFVLSANLH GGALVASYPF ENSBTAP00000017941/1-442 DLNRNFPDAF ELNEVPRQPE TVAVMKWLTT ETFVLSANLH GGALVASYPF bmy_19961T0/1-229 DLNRNFPDAF EFNNVPRQPE TVAVMKWLNT ETFVLSANLH GGALVASYPF BACU016439/1-327 DLNRNFPDAF EFNNVPRQPE TVAVMKWLNT ETFVLSANLH GGALVASYPF 201 250 ENSTTRP00000006939/1-443 DNGVPXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000448517/1-443 DNGVQATGAL YSRSLTPDDD VFQYLAHTYA SRNPNMKKGD ECKNKMNFPN ENSBTAP00000017941/1-442 DNGVPATGTL YSRSLTPDDD VFQYLANTYA SRNPDM-KRN SCRIKTGFSN bmy_19961T0/1-229 DNGVPATGTL YPRSLTPDDD VFQYLARTYA SRNPDMRKRN PCRTKIEFPG BACU016439/1-327 DNGVPATGTL YSRSLTPDDD VFQYLARTYA SRNPDMRKRN PCRTKIEFPG 251 300 ENSTTRP00000006939/1-443 XXXXXXXXXX XXXGMQDYNY IWAQCFEITL ELSCCKYPRK EKLPSFWNEN ENSP00000448517/1-443 GVTNGYSWYP LQGGMQDYNY IWAQCFEITL ELSCCKYPRE EKLPSFWNNN ENSBTAP00000017941/1-442 GIINGYSWYP LKGGMQDYNY IWAQCFEITL ELSCCKYPRK EKLPGFWKDN bmy_19961T0/1-229 GIVNGYFWYP LKGGMQDYNY IWAQCFEITL ELSCCKYPRK EKLPSFWNDN BACU016439/1-327 GIVNGYFWYP LKGGMQDYNY IWAQCFEITL ELSCCKYPRK EKLPSFWNDN 301 350 ENSTTRP00000006939/1-443 KDSLIDYIKQ VHIGVKGQIF DQNGTPLPNV TVEVQDRKHV CPYRTNKFGE ENSP00000448517/1-443 KASLIEYIKQ VHLGVKGQVF DQNGNPLPNV IVEVQDRKHI CPYRTNKYGE ENSBTAP00000017941/1-442 KDSLIEYIKQ VHIGVKGQVF DQNQTPLSNV TVEVQDRKHI CPYRTNKFGE bmy_19961T0/1-229 KDSLIDYIKQ VHIGL----- ---------- ---------- ---------- BACU016439/1-327 KDSLIDYIKQ VHIGVKGQIF DQNGTPLPNV TVEVQDRKHV CPYRTNKFGE 351 400 ENSTTRP00000006939/1-443 YYLLLLPGVY VIEVTVPGHN PHLTEVTIPP KSQNFSALKK DILLPFTGQL ENSP00000448517/1-443 YYLLLLPGSY IINVTVPGHD PHITKVIIPE KSQNFSALKK DILLPFQGQL ENSBTAP00000017941/1-442 YYLLLLPGSY VIEVTVPGHD PHLTKVTIPP KSQNFSALKK DILLPFRGQL bmy_19961T0/1-229 ---------- ---------- ---------- ---------- ---------- BACU016439/1-327 YYLLLLPGFY VIEVAI---- -------CPE DEREEGEPMR D--------- 401 450 ENSTTRP00000006939/1-443 DHIPESDPLC PIIPLYRDLQ GHSAATKPSL FLFLVTLFHI LFK ENSP00000448517/1-443 DSIPVSNPSC PMIPLYRNLP DHSAATKPSL FLFLVSLLHI FFK ENSBTAP00000017941/1-442 NHISESNPLC PRIPLYSELQ GHSAATKPSL FLFLVTLFHI LFK bmy_19961T0/1-229 ---------- ---------- ---------- ---------- --- BACU016439/1-327 ---------- ---------- ---------- ---------- ---