KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:19 2014 Check: 00 .. Name: ENSTTRP00000013773/1-563 Len: 565 Check: 4060 Weight: 1.00 Name: ENSP00000221742/1-564 Len: 565 Check: 2772 Weight: 1.00 Name: ENSBTAP00000017953/1-565 Len: 565 Check: 7978 Weight: 1.00 Name: bmy_22424T0/1-380 Len: 565 Check: 3216 Weight: 1.00 Name: BACU004868/1-564 Len: 565 Check: 2843 Weight: 1.00 // 1 50 ENSTTRP00000013773/1-563 MSSHGNSLFL RESGQRLGRV GLLQRLLDSL QQRALRTRLR LQTMTREHVL ENSP00000221742/1-564 MSSHGNSLFL RESGQRLGRV GWLQRLQESL QQRALRTRLR LQTMTLEHVL ENSBTAP00000017953/1-565 MSSHGNSLFL RESGQRLGRV GWLQRLQESL QQRALRMRLR LQTMTREHVL bmy_22424T0/1-380 ---------- ---------- ---------- ---------- ---------- BACU004868/1-564 MSSHGNSLFL RESGQRLGRV GWLQRLLDGL QQRALRTRLR LQTMTLEHVL 51 100 ENSTTRP00000013773/1-563 RFLRRNAFIL LTVSAVVIGV SLAFALRPYQ LSYRQVKYFS FPGELLMRML ENSP00000221742/1-564 RFLRRNAFIL LTVSAVVIGV SLAFALRPYQ LTYRQIKYFS FPGELLMRML ENSBTAP00000017953/1-565 RFLRRNAFIL LTVSAVVIVI SVMFLYFSLE VKYQPVGGLE MKGRLLWGHQ bmy_22424T0/1-380 ---------- ---------- ---------- ---------- ---------- BACU004868/1-564 RFLRRNAFIL LTVSAVVIGV SLAFALRPYQ LSYRQIKSFS FPGELLMRML 101 150 ENSTTRP00000013773/1-563 QMLVLPLIVS SLVTGMASLD NKATGRMGMR AAVYYMVTTV IAVFIGILMV ENSP00000221742/1-564 QMLVLPLIVS SLVTGMASLD NKATGRMGMR AAVYYMVTTI IAVFIGILMV ENSBTAP00000017953/1-565 ERYLGYGVEA STSFGGAVVD DKGIEELGRQ ADPVRKYSTQ VEPSFRIIVY bmy_22424T0/1-380 ---------- ---------- ---------- ---------- ---------- BACU004868/1-564 QMLVLPLIVS SLVTGMASLD NKATGRMGMR AAVYYMVTTV IAVFIGILMV 151 200 ENSTTRP00000013773/1-563 TIIHPGKGSK EG-LHREGRI ETVPTADAFM DLV-NMFPPN LVEACFKQFK ENSP00000221742/1-564 TIIHPGKGSK EG-LHREGRI ETIPTADAFM DLIRNMFPPN LVEACFKQFK ENSBTAP00000017953/1-565 VSWHPVSVLG DGEMHWKVLF QSLTTSIYLI FFCRNMFPPN LVEACFKQFK bmy_22424T0/1-380 ---------- ---------- ---------- -----MFPPN LVEACFKQFK BACU004868/1-564 TIIHPGKGSK EG-LHREGRI ETIPTADAFM DLVRNMFPPN LVEACFKQFK 201 250 ENSTTRP00000013773/1-563 TQYSTRLVTR TIVRTDNGSE LGTSMPPLSS MENGSSLLEN VTRAIGTLQE ENSP00000221742/1-564 TQYSTRVVTR TMVRTENGSE PGASMPPPFS VENGTSFLEN VTRALGTLQE ENSBTAP00000017953/1-565 TQYSTRLVTR TVVRTDNGSE LGTSMPPLSS LENGTGLLEN VTRALGTLQE bmy_22424T0/1-380 TQYSTRLVTR TIVRTDNGSE LGTSMPPLSS MENGSSLLEN VTRAMGTLQE BACU004868/1-564 TQYSTRLVTR TIVRTDNGSE LGTSMPPLSS MENGSSLLEN VTRAMGTLQE 251 300 ENSTTRP00000013773/1-563 VLSFEETVPV PGSANGINAL GLVVFSVAFG LVIGGMKHKG RVLRDFFDSL ENSP00000221742/1-564 MLSFEETVPV PGSANGINAL GLVVFSVAFG LVIGGMKHKG RVLRDFFDSL ENSBTAP00000017953/1-565 VLSFEETVPV PGSANGINAL GLVVFSVAFG LVIGGMKHKG RVLRDFFDSL bmy_22424T0/1-380 VLSFEETVPV PGSANGINAL GLVVFSVAFG LVIGGMKHKG RVLRDFFDSL BACU004868/1-564 VLSFEETVPV PGSANGINAL GLVVFSVAFG LVIGGMKHKG RVLRDFFDSL 301 350 ENSTTRP00000013773/1-563 NEAIMRLVGI IIWYAPVGIL FLIAGKILEM EDMAVLGGQL GMYTLTVIVG ENSP00000221742/1-564 NEAIMRLVGI IIWYAPVGIL FLIAGKILEM EDMAVLGGQL GMYTLTVIVG ENSBTAP00000017953/1-565 NEAIMRLVGI IIWYAPVGIL FLIAGKILEM EDMAVLGGQL GMYTLTVIVG bmy_22424T0/1-380 NEAIMRLVGI IIWYAPVGIL FLIAGKILEM EDMAVLGGQL GMYTLTVIVG BACU004868/1-564 NEAIMRLVGI IIWYAPVGIL FLIAGKILEM EDMAVLGGQL GMYTLTVIVG 351 400 ENSTTRP00000013773/1-563 LFHHASGLLP LIYFLITHRK PFPFIGGILQ ALITAMGTSY SSATLPITFR ENSP00000221742/1-564 LFLHAGIVLP LIYFLVTHRN PFPFIGGMLQ ALITAMGTSS SSATLPITFR ENSBTAP00000017953/1-565 LFVHAGGILP LIYFLITHRN PFPFIGGILQ ALITAMGTSS SSATLPITFR bmy_22424T0/1-380 LFLHAGGILP LIYFLITHRN PFPFIGGILQ ALITAMGTSS SSATLPITFR BACU004868/1-564 LFLHAGGILP LIYFLITHRN PFPFIGGILQ ALITAMGTSS SSATLPITFR 401 450 ENSTTRP00000013773/1-563 CLEEGLGVDR RITRFVLPVG ATVNMDGTAL YXXXXXXXXX XXXXXXXXXX ENSP00000221742/1-564 CLEEGLGVDR RITRFVLPVG ATVNMDGTAL YEALAAIFIA QVNNYELNLG ENSBTAP00000017953/1-565 CLEEGLGVDR RITRFVLPVG ATVNMDGTAL YEALAAIFIA QVNNYELNLG bmy_22424T0/1-380 CLEEGLGVDR RITRFVLPVG ATVNMDGTAL YEALAAIFIA QVNNYELNLG BACU004868/1-564 CLEEGLGVDR RITRFVLPVG ATVNMDGTAL YEALAAIFIA QVNNYELNLG 451 500 ENSTTRP00000013773/1-563 XXXXXXITAT AASIGAAGIP QAGLVTMVIV LTSVGLPTED ITLIIAVDWF ENSP00000221742/1-564 QITTISITAT AASVGAAGIP QAGLVTMVIV LTSVGLPTED ITLIIAVDWF ENSBTAP00000017953/1-565 QITTISITAT AASVGAAGIP QAGLVTMVIV LTSVGLPTED ITLIIAVDWF bmy_22424T0/1-380 QITTISITAT AASVGAAGIP QAGLVTMVIV LTSVGLPTED ITLIIAVDWF BACU004868/1-564 QITTISITAT AASVGAAGIP QAGLVTMVIV LTSVGLPTED ITLIIAVDWF 501 550 ENSTTRP00000013773/1-563 LDRLRTVTNV LGDSIGAAVI EHLSQRELEL QEAELTLPSL GKPYKSLMAQ ENSP00000221742/1-564 LDRLRTMTNV LGDSIGAAVI EHLSQRELEL QEAELTLPSL GKPYKSLMAQ ENSBTAP00000017953/1-565 LDRLRTMTNV LGDSIGAAVI EHLSQRELEL QEAELTLPSL GKPYKSLMAQ bmy_22424T0/1-380 LDRLRTVTNV LGDSIGAAVI EHLSQRELEL QEAELTLPSL GKPYKSLMAQ BACU004868/1-564 LDRLRTMTNV LGDSIGAAVI EHLSQRELEL QEAELTLPSL GKPYKSLMAQ 551 600 ENSTTRP00000013773/1-563 EKGASRGRGG NESAM ENSP00000221742/1-564 EKGASRGRGG NESAM ENSBTAP00000017953/1-565 EKGASRGRGG NESAM bmy_22424T0/1-380 EKGASRGRGG NESAM BACU004868/1-564 EKGASRGRGG NESAM