KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:24 2014 Check: 00 .. Name: ENSTTRP00000011611/1-453 Len: 962 Check: 5995 Weight: 1.00 Name: BACU001975/1-953 Len: 962 Check: 5812 Weight: 1.00 Name: ENSP00000380794/1-453 Len: 962 Check: 5710 Weight: 1.00 Name: ENSBTAP00000017987/1-450 Len: 962 Check: 3837 Weight: 1.00 Name: bmy_00928T0/1-450 Len: 962 Check: 2979 Weight: 1.00 // 1 50 ENSTTRP00000011611/1-453 MWSPEREAEA PAGGDPAGLL PPEWEEDEER MSFLFSAFKR SREVNSTDWD BACU001975/1-953 MWSPEREAEA PAGGDPAGLL PPEWEEDEER LSFLFSAFKR SREVNSTDWD ENSP00000380794/1-453 MWSPEREAEA PAGGDPAGLL PPEWEEDEER MSFLFSAFKR SREVNSTDWD ENSBTAP00000017987/1-450 MWSPEREAEA PAGGDPAGLL PPEWEEDEER MSFLFSAFKR SREVNSTDWD bmy_00928T0/1-450 MWSPEREAEA PAGGDPAGLL PPEWEEDEER LSFLFSAFKR SREVNSTDWD 51 100 ENSTTRP00000011611/1-453 SKMGFWAPLV LSHSRRQGVV RLRLRDLQEA FQRKGSVPLG LATVLQDLLR BACU001975/1-953 SKMGFWAPLV LSHSRRQGVV RLRLRDLQEA FQRKGSVPLG LATVLQDLLR ENSP00000380794/1-453 SKMGFWAPLV LSHSRRQGVV RLRLRDLQEA FQRKGSVPLG LATVLQDLLR ENSBTAP00000017987/1-450 SKMGFWAPLV LSHSRRQGVV RLRLRDLQEA FQRKGSVPLG LATVLQDLLR bmy_00928T0/1-450 SKMGFWAPLV LSHSRRQGVV RLRLRDLQEA FQRKGSVPLG LATVLQDLLR 101 150 ENSTTRP00000011611/1-453 RGELQRESDF MASVDSSWIS WGVGVFLLKP LKWTLSNMLG DNKVPAEEVL BACU001975/1-953 RGELQRESDF MASVDSSWIS WGVG------ --WTLSNILG DNKVPAEEVL ENSP00000380794/1-453 RGELQRESDF MASVDSSWIS WGVGVFLLKP LKWTLSNMLG DNKVPAEEVL ENSBTAP00000017987/1-450 RGELQRESDF MASVDSSWIS WGVGVFLLKP LKWTLSNMLG DHKVPAEEVL bmy_00928T0/1-450 RGELQRESDF MASVDSSWIS WGVGVFLLKP LKWTLSNMLG DNKVPAEEVL 151 200 ENSTTRP00000011611/1-453 VALELLKEKA EEVYRLYQNS PLSSHPVVAL SELSTLCAGS CLDERTFYLV BACU001975/1-953 VALELLKEKA EEVYRLYQNS PLSSHPVVAL SELSTLCAGS CLDERTFYLV ENSP00000380794/1-453 VAVELLKEKA EEVYRLYQNS PLSSHPVVAL SELSTLCANS CPDERTFYLV ENSBTAP00000017987/1-450 VAVELLKEKA EEVYRLYQNS PLSSHPVVAL SELSTLCAGS CPDERTFYLV bmy_00928T0/1-450 VALELLKEKA EEVYRLYQNS PLSSHPVVAL SELSTLCAGS CLDERTFYLV 201 250 ENSTTRP00000011611/1-453 LLQLQKEKRV TVLEQNGEKI VKFARGPHAK VSPVNDVDVG VYQLMQSEQL BACU001975/1-953 LLQLQKEKRV TVLEQNGEKI VKFARGPHAK VSPVNDVDVG VYQLMQSEQL ENSP00000380794/1-453 LLQLQKEKRV TVLEQNGEKI VKFARGPRAK VSPVNDVDVG VYQLMQSEQL ENSBTAP00000017987/1-450 LLQLQKEKRV TVLEQNGEKI VKFARGPHAK VSPVNDVDVG VYQLMQSEQL bmy_00928T0/1-450 LLQLQKEKRV TVLEQNGEKI VKFARGPHAK VSPVNDVDVG VYQLMQSEQL 251 300 ENSTTRP00000011611/1-453 LSCKVESLSQ EAEXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU001975/1-953 LSRKVESLSQ EAERYKEEAR RACRAGKKQL ALRSLKAKQR TEKRIEALHA ENSP00000380794/1-453 LSRKVESLSQ EAERCKEEAR RACRAGKKQL ALRSLKAKQR TEKRIEALHA ENSBTAP00000017987/1-450 LSRKVESLSQ EAERYKEEAR RACRAGKKQL ALRSLKAKQR TEKRIEALHA bmy_00928T0/1-450 LSRKVESLSQ EAERNKEEAR XACRAGKKQL ALRSLKAKQR TEKRIEALHA 301 350 ENSTTRP00000011611/1-453 XXXXXXXXXX XXXXXXXXXX VFNAYQAGVG ALKLSMKDVT VEKAESLVDQ BACU001975/1-953 KLDTVQGILD RIYASQTDQM VFNAYQAGVG ALKLSMKDVT VEKAESLVDQ ENSP00000380794/1-453 KLDTVQGILD RIYASQTDQM VFNAYQAGVG ALKLSMKDVT VEKAESLVDQ ENSBTAP00000017987/1-450 KLDTVQGILD RIYASQTDQM VFNAYQAGVG ALKLSMKDVT VEKAESLVDQ bmy_00928T0/1-450 KLDTVQGILD RIYASQTDQM VFNAYQAGVG ALKLSMKDVT VEKAESLVDQ 351 400 ENSTTRP00000011611/1-453 IQELCDTQDE VSQTLAGGVT NGLDFDSEEL EKELDILLQD TTKEPSDLPD BACU001975/1-953 IQELCDTQDE VSQTLAGGVT NGLDFDSEEL EKELDILLQD TTKEPLDLPD ENSP00000380794/1-453 IQELCDTQDE VSQTLAGGVT NGLDFDSEEL EKELDILLQD TTKEPLDLPD ENSBTAP00000017987/1-450 IQELCDTQDE VSQTLAGGVT NGLDFDSEEL EKELDILLQD TTKEPSDLPY bmy_00928T0/1-450 IQELCDTQDE VSQTLAGGVT NGLDFDSEEL EKELDILLQD TTKEPLDLPD 401 450 ENSTTRP00000011611/1-453 NPQETFYTNS VPNPRISDAE LEAELEKLSL SEG------- ---------- BACU001975/1-953 NPQETFHTNS VPTPRISDAE LEAELEKLSL SEGDRIVATG SDVWWCLGLG ENSP00000380794/1-453 NPRNRHFTNS VPNPRISDAE LEAELEKLSL SEG------- ---------- ENSBTAP00000017987/1-450 NPQETFYINS VPNTRISDAE LEAELEKLSL SEG------- ---------- bmy_00928T0/1-450 NPQETFHTNS VPTPRISDAE LEAELEKLSL SEG------- ---------- 451 500 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- ---------- BACU001975/1-953 KRDLALEVLP PVTLALLCLD GVFLSSAEND FVHRIQEELD RFLLQKQLSK ENSP00000380794/1-453 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- ---------- bmy_00928T0/1-450 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- ---------- BACU001975/1-953 VLLFPPLSSR LRYLIHRTAE NFDLLSSFSV GEGWRRRTVI CHLDIRLPGS ENSP00000380794/1-453 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- ---------- bmy_00928T0/1-450 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- ---------- BACU001975/1-953 DGPSGPCRPP ASHPSKYRGP RSTSSQGAAS GPRGARAGWW HRGRKPDQAL ENSP00000380794/1-453 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- ---------- bmy_00928T0/1-450 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- ---------- BACU001975/1-953 YVPRALRRRE EWAPLPAPGL QGGAPAGGLP EEPDDIRAGD PTSDQELPVL ENSP00000380794/1-453 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- ---------- bmy_00928T0/1-450 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- --------GL BACU001975/1-953 ATQAAEVRKG RSKSEKESLP DPVATESPGP EDHSGTGDRS ESATRPGPGL ENSP00000380794/1-453 ---------- ---------- ---------- ---------- --------GL ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- --------GL bmy_00928T0/1-450 ---------- ---------- ---------- ---------- --------GL 701 750 ENSTTRP00000011611/1-453 VPS------- ---------- ---------- ---------- ---------- BACU001975/1-953 QPDLEDGSGS ELERSLATEK EEDEVEEEGP GSCSEEDDYS ELLQEIMDNL ENSP00000380794/1-453 VPS------- ---------- ---------- ---------- ---------- ENSBTAP00000017987/1-450 VPS------- ---------- ---------- ---------- ---------- bmy_00928T0/1-450 VPS------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- ---------- BACU001975/1-953 TEKEIQVEKI HVDTSSFAEE LPGEKDFAHV VEIYDFEPAL KTEDLLAAFS ENSP00000380794/1-453 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- ---------- bmy_00928T0/1-450 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- ---------- BACU001975/1-953 EFQEKGFKIQ WVDDTHALGV FPCLASAAEA LTRDFSTLKI RPLTQGTKQS ENSP00000380794/1-453 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- ---------- bmy_00928T0/1-450 ---------- ---------- ---------- ---------- ---------- 851 900 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- ---------- BACU001975/1-953 KLKALQRPKS TRGAFRGQFS MAAKQRLAKL AWEKPAEAVH ILVDYVVFVP ENSP00000380794/1-453 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- ---------- bmy_00928T0/1-450 ---------- ---------- ---------- ---------- ---------- 901 950 ENSTTRP00000011611/1-453 ---------- ---------- ---------- ---------- -------SKS BACU001975/1-953 DFLGTINILS VDPRAPELLR LAKERPQTNT AVARRLVARA LGLQHRKKER ENSP00000380794/1-453 ---------- ---------- ---------- ---------- -------SKS ENSBTAP00000017987/1-450 ---------- ---------- ---------- ---------- -------RKS bmy_00928T0/1-450 ---------- ---------- ---------- ---------- -------SKS 951 1000 ENSTTRP00000011611/1-453 PKRQLEPTLK PL BACU001975/1-953 PAVEPPPTLG P- ENSP00000380794/1-453 PKRQLEPTLK PL ENSBTAP00000017987/1-450 PKRQLEPTL- -- bmy_00928T0/1-450 PKRQLEPTL- --