KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:24 2014 Check: 00 .. Name: ENSTTRP00000002867/1-512 Len: 513 Check: 5368 Weight: 1.00 Name: ENSP00000270776/1-483 Len: 513 Check: 5629 Weight: 1.00 Name: ENSBTAP00000017988/1-483 Len: 513 Check: 2275 Weight: 1.00 Name: bmy_06065T0/1-470 Len: 513 Check: 4527 Weight: 1.00 Name: BACU018703/1-481 Len: 513 Check: 751 Weight: 1.00 // 1 50 ENSTTRP00000002867/1-512 GLGLGREPEK NSVPVVRAAS LFAGSPRSAA MAQADIALIG LAVMGQNLIL ENSP00000270776/1-483 ---------- ---------- ---------- MAQADIALIG LAVMGQNLIL ENSBTAP00000017988/1-483 ---------- ---------- ---------- MAQADIALIG LAVMGQNLIL bmy_06065T0/1-470 ---------- ---------- ---------- ---------- ---MGQNLIL BACU018703/1-481 ---------- ---------- ---------- --RADIALIG LAVMGQNLIL 51 100 ENSTTRP00000002867/1-512 NMNDHGFVVC AFNRTVSKVD EFLANEAKGT KVVGAHSLEE MVSKLKKPRR ENSP00000270776/1-483 NMNDHGFVVC AFNRTVSKVD DFLANEAKGT KVVGAQSLKE MVSKLKKPRR ENSBTAP00000017988/1-483 NMNDHGFVVC AFNRTVSKVD DFLANEAKGT KVLGAHSLEE MASKLKKPRR bmy_06065T0/1-470 NMNDHGFVVC AFNRTVSKVD DFLANEAKGT KVVGAHSLEE MVSKLKKPRR BACU018703/1-481 NMNDHGFVVC AFNRTVSKVD DFLANEAKGT KVVGAHSLEE MVSKLKKPRR 101 150 ENSTTRP00000002867/1-512 IILLVKAGQA VDDFIEKLVP LLDTGDIIID GGNSEYRDTT RRCRDLKAKG ENSP00000270776/1-483 IILLVKAGQA VDDFIEKLVP LLDTGDIIID GGNSEYRDTT RRCRDLKAKG ENSBTAP00000017988/1-483 IILLVKAGQA VDDFIEKLVP LLDIGDIIID GGNSEYRDTM RRCRDLKEKG bmy_06065T0/1-470 IILLVKAGQA VDDFIKKLVP LLDTGDIIID GGNSEYRDTT RRCRDLKAKG BACU018703/1-481 IILLVKAGQA VDDFIKKLVP LLDTGDIIID GGNSEYRDTT RRCRDLKAKG 151 200 ENSTTRP00000002867/1-512 ILFVGSGVSG GEDGARYGPS LMPGGNKEAW PHIKAIFQGI AAKVGTGEPC ENSP00000270776/1-483 ILFVGSGVSG GEEGARYGPS LMPGGNKEAW PHIKTIFQGI AAKVGTGEPC ENSBTAP00000017988/1-483 ILFVGSGVSG GEDGARYGPS LMPGGNKEAW PHIKAIFQGI AAKVGTGEPC bmy_06065T0/1-470 ILFVGSGVSG GEDGARYGPS LMPGGNKEAW PHIKAIFQGI AAKVGTGEPC BACU018703/1-481 ILFVGSGVSG GEDGARYGPS LMPGGNKEAW PHIKAIFQGI AAKVGTGEPC 201 250 ENSTTRP00000002867/1-512 CDWVGDEGAG HFVKMVHNGI EYGDMQLICE AYHLMKDVLG MEHKEMAKAF ENSP00000270776/1-483 CDWVGDEGAG HFVKMVHNGI EYGDMQLICE AYHLMKDVLG MAQDEMAQAF ENSBTAP00000017988/1-483 CDWVGDEGAG HFVKMVHNGI EYGDMQLICE AYHLMRDVLC MGHAEMAKAF bmy_06065T0/1-470 CDWVGDEGAG HFVKMVHNGI EYGDMQLICE AYHLMKDVLG MEHKEMAKAF BACU018703/1-481 CDWVGDEGAG HFVKMVHNGI EYGDMQLICE AYHLMKDVLG MEHKEMAEAF 251 300 ENSTTRP00000002867/1-512 EEWNKTELDS FLIEITANIL RFQDTDGEHL LPKIRDSAGQ KGTGKWTAIS ENSP00000270776/1-483 EDWNKTELDS FLIEITANIL KFQDTDGKHL LPKIRDSAGQ KGTGKWTAIS ENSBTAP00000017988/1-483 EEWNKTELDS FLIEITANIL KFQDADGKHL LPKIRDSAGQ KGTGKWTAIS bmy_06065T0/1-470 EEWNKTELDS FLIEITASIL RFQDTDGKHL LPKIRDSAGQ KGTGKWTAIS BACU018703/1-481 EEWNKTELDS FLIEITASIL RFQDTDGKHL LPKIRDSAGQ KGTGKWTAIS 301 350 ENSTTRP00000002867/1-512 ALEYGVPVTL IGEAVFARCL SSL-DERIQA SQKLXXXXXX XXXXXXXXXX ENSP00000270776/1-483 ALEYGVPVTL IGEAVFARCL SSLKDERIQA SKKLKGPQKF QFDGDKKSFL ENSBTAP00000017988/1-483 ALEYGVPVTL IGEAVFARCL SSLKDERIQA SKKLKGPQNV PFEGDKKSFL bmy_06065T0/1-470 ALEYGVPVTL IGEAVFARCL SSLKDERIQA SQKLKGPQKV QFEGDKKSFL BACU018703/1-481 ALEYGVPVTL IGEAVFARCL SSLKDERTQA SQKLKGPQKV QFEGDKKSFL 351 400 ENSTTRP00000002867/1-512 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000270776/1-483 EDIRKALYAS KIISYAQGFM LLRQAATEFG WTLNYGGIAL MWRGGCIIRS ENSBTAP00000017988/1-483 EDIRKALYAS KIISYAQGFM LLRQAATEFG WTLNYGGIAL MWRGGCIIRS bmy_06065T0/1-470 EDIRKALYAS KIISYAQGFM LLRQAATEFG WTLNYGGIAL MWRGGCIIRS BACU018703/1-481 EDIRKALYAS KIISYAQGFM LLRQAATEFG WTLNYGGIAL MWRGGCIIRS 401 450 ENSTTRP00000002867/1-512 VFLGKIKDAF DRNPGLQNLL LDDFFKSAVE NCQDSWRRAV STGVQTGIPM ENSP00000270776/1-483 VFLGKIKDAF DRNPELQNLL LDDFFKSAVE NCQDSWRRAV STGVQAGIPM ENSBTAP00000017988/1-483 VFLGKIKDAF DRNPGLQNLL LDDFFKSAVE NCQDSWRRAI STGVQAGIPM bmy_06065T0/1-470 VFLGKIKDAF DRNPGLQNLL LDDFFKSAVE NCQDSWRRAV STGVQTGIPM BACU018703/1-481 VFLGKIKDAF DRNPGLQNLL LDDFFKSAVE NCQDSWRRAV STGVQTGIPM 451 500 ENSTTRP00000002867/1-512 PCFTTALSFY DGYRHKMLPA NLIQAQRDYF GAHTYELLNK PGQFIHTNWT ENSP00000270776/1-483 PCFTTALSFY DGYRHEMLPA SLIQAQRDYF GAHTYELLAK PGQFIHTNWT ENSBTAP00000017988/1-483 PCFTTALSFY DGYRHEMLPA NLIQAQRDYF GAHTYELLAK PGQFIHTNWT bmy_06065T0/1-470 PCFTTALSFY DGYRHEMLPA NLIQAQRDYF GAHTYELLAK PGQFIHTNWT BACU018703/1-481 PCFTTALSFY DGYRHEMLPA NLIQAQRDYF GAHTYELLAK PGQFIHTNWT 501 550 ENSTTRP00000002867/1-512 GHGGSVSSSS YNA ENSP00000270776/1-483 GHGGTVSSSS YNA ENSBTAP00000017988/1-483 GHGGSVSSSS YNA bmy_06065T0/1-470 GHGGSVSSSS YNA BACU018703/1-481 GHGGSVSSSS YNA