KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:29 2014 Check: 00 .. Name: ENSP00000296754/1-948 Len: 949 Check: 1350 Weight: 1.00 Name: ENSBTAP00000018026/1-942 Len: 949 Check: 2097 Weight: 1.00 Name: ENSTTRP00000015236/1-946 Len: 949 Check: 7625 Weight: 1.00 Name: bmy_21853T0/1-853 Len: 949 Check: 2819 Weight: 1.00 Name: BACU017797/1-930 Len: 949 Check: 9330 Weight: 1.00 // 1 50 ENSP00000296754/1-948 MVFLPLKWSL ATMSFLLSSL LALLTVSTPS WCQSTE-ASP KRSDGTPFPW ENSBTAP00000018026/1-942 MISPSIKWSL GTRPLLLSTL LILLTVATPS SCQSREPTSP KASNGAPFPW ENSTTRP00000015236/1-946 -IPLSVKRPL VTVSLLLSSL LMLLTVATPS WCQSSETTPP KASNRAPFPW bmy_21853T0/1-853 MISLSIKRPL VTMSFLLSSL LMLLTVATPS WCQSSETTSP KAGNRAPFPW BACU017797/1-930 ---------- --MSFLLSSL LMLLTVATPS WCQSSETTSP KANNRAPFPW 51 100 ENSP00000296754/1-948 NKIRLPEYVI PVHYDLLIHA NLTTLTFWGT TKVEITASQP TSTIILHSHH ENSBTAP00000018026/1-942 NKIRLPEHII PAHYDLMIHA NLTTLTFGGT TQIEITASKP TSTIILHSHR ENSTTRP00000015236/1-946 NKMRLPEHII PLHYDLMIHA NLTTLTFGGT TEIEITASKP TSTIILHSHH bmy_21853T0/1-853 NKMRLPEHIT PVHYDLVIHA NLTTLTFEGT TEIEITASKP TSTIILHSHH BACU017797/1-930 NKMRLPEHIT PVHYDLVIHA NLTTLTFGGT TEIEITASKP TSTIILHSHH 101 150 ENSP00000296754/1-948 LQISRATLRK GAGERLSEEP LQVLEHPRQE QIALLAPEPL LVGLPYTVVI ENSBTAP00000018026/1-942 LQISKAALRK GGGERQAEEP LRVLENPPQE QIALLASEPL VVGLPYTIVI ENSTTRP00000015236/1-946 LQISKAALRK GAGERQSEEP LRVLEYLPQE QIALLAPEPL VVGLPYTIVI bmy_21853T0/1-853 LQISKAALRK GAGERQSEEP LRVLEYPPQE QIALLAPEPL VVGLPYTIVI BACU017797/1-930 LQISKAALRK GAGERQSEEP LRVLEYPPQE QIAFLAPEPL VVGLPYTIVI 151 200 ENSP00000296754/1-948 HYAGNLSETF HGFYKSTYRT KEGELRILAS TQFEPTAARM AFPCFDEPAF ENSBTAP00000018026/1-942 DYAGNLSESF HGFYKSTYRT KEGEVRILAS TQFEPTAARM AFPCFDEPAL ENSTTRP00000015236/1-946 DYAGNLSESF HGFYKSTYRT KEGEVRILAS TQFEPTAARM AFPCFDEPAF bmy_21853T0/1-853 DYAGNLSESF HGFYKSTYRT KEGEVRILAS THFEPTAARM AFPCFDEPAF BACU017797/1-930 DYAGNLSESF HGFYKSTYRT KEGEVRILAS TQFEPTAARM AFPCFDEPAF 201 250 ENSP00000296754/1-948 KASFSIKIRR EPRHLAISNM PLVKSVTVAE GLIEDHFDVT VKMSTYLVAF ENSBTAP00000018026/1-942 KASFLIKIRR EPRHLAISNM PLVKSVTVAE GLIEDHFDVT VRMSTYLVAF ENSTTRP00000015236/1-946 KASFSIKIRR EPRHLAISNM PLVKSVTVAE GLVEDHFDVT VKMSTYLVAF bmy_21853T0/1-853 KASFSIKIRR EPRHLAISNM PL-------- ---------- ---------- BACU017797/1-930 KASFSIKIRR EPRHLAISNM PLVKSVTVAE GLIEDHFDVT VKMSTYLVAF 251 300 ENSP00000296754/1-948 IISDFESVSK ITKSGVKVSV YAVPDKINQA DYALDAAVTL LEFYEDYFSI ENSBTAP00000018026/1-942 IVSDFKSVSK MTKSGVKVSV YAVPDKINQA DYALDAAVTL LEFYEDYFSI ENSTTRP00000015236/1-946 IVSDFKSVSK MTKSGIKVSV YAVPDKINQA GYALDAAVTL LEFYEDYFSI bmy_21853T0/1-853 ---------- -------VSV YAVPDKINQA DYALDAAVTL LEFYEDYFSI BACU017797/1-930 IVSDFKSVSK MTKSGVKVSV YAVPDKINQA DYALDAAVTL LEFYEDYFSI 301 350 ENSP00000296754/1-948 PYPLPKQDLA AIPDFQSGAM ENWGLTTYRE SALLFDAEKS SASSKLGITM ENSBTAP00000018026/1-942 PYPLPKQDLA AIPDFQSGAM ENWGLTTYRE SSLLFDAEKS SASSKLGITM ENSTTRP00000015236/1-946 PYPLSKQDLA AIPDFQSGAM ENWGLTTYRE SSLLFDAEKS SASSKLGITM bmy_21853T0/1-853 PYPLSKQDLA AIPDFQAGAM ENWGLTTYRE SSLLFDAEKS SASSKLGITM BACU017797/1-930 PYPLSKQDLA AIPDFQSGAM ENWGLTTYRE SSLLFDAEKS SASSKLGITM 351 400 ENSP00000296754/1-948 TVAHELAHQW FGNLVTMEWW NDLWLNEGFA KFMEFVSVSV THPELKVGDY ENSBTAP00000018026/1-942 IVSHELAHQW FGNLVTMEWW NDLWLNEGFA KFMEFVSVSV THPELKVEDY ENSTTRP00000015236/1-946 TVSHELAHQW FGNLVTMEWW NDLWLNEGFA KFMEFVSVSV THPELKVEDY bmy_21853T0/1-853 TVSHELAHQW FGNLVTMEWW NDLWLNEGFA KFMEFVSVSV THPELKVEDY BACU017797/1-930 TVSHELAHQW FGNLVTMEWW NDLWLNEGFA KFMEFVSVSV THPELKVEDY 401 450 ENSP00000296754/1-948 FFGKCFDAME VDALNSSHPV STPVENPAQI REMFDDVSYD KGACILNMLR ENSBTAP00000018026/1-942 FFGKCFNAME VDALNSSHPV STPVENPAQI REMFDEVSYD KGACILNMLR ENSTTRP00000015236/1-946 FFAKCFNAME VDALNSSHPV STPVENPAQI RELFDEVSYE KGACVLNMLR bmy_21853T0/1-853 FLDKCFNAME VDALNSSHPV STPVENPTQI XEIFDEVSYE K--------- BACU017797/1-930 FFGKCFNAME VDALNSSHPV STPVENPAQI REIFDEVSYE KGACILNMLR 451 500 ENSP00000296754/1-948 EYLSADAFKS GIVQYLQKHS YKNTKNEDLW DSMASICPTD GVKGMDGFCS ENSBTAP00000018026/1-942 DYLGADAFKS GIVNYLQKYS YKNTKNEDLW NSMASICPTD DTQHMDGFCS ENSTTRP00000015236/1-946 DYLGADAFKS GIVKYLQKYS YKNTKNEDLW NSMASICPTD GTQQMDGFCS bmy_21853T0/1-853 ---------- ---------- ---------- -----ICPTD GTQXMDGFCS BACU017797/1-930 DYLGADAFKS GIVKYLQKYS YKNTKNEDLW NSMASICPTD GTQQMDGFCS 501 550 ENSP00000296754/1-948 RSQHSSSSSH WHQEGVDVKT MMNTWTLQKG FPLITITVRG RNVHMKQEHY ENSBTAP00000018026/1-942 RGEHASSTAH WRQEGLDVKT MMNTWTLQKG FPLITITVRG RNVHMKQEYY ENSTTRP00000015236/1-946 RGEHSSSSSH WRQEGLDVKT MMNTWTLQKG FPLITITVRG RNVHMKQEHY bmy_21853T0/1-853 RGEHSSSSSH WRQEGLDVKT MMNTWTLQKG FPLITITVRG RNVHMKQEHY BACU017797/1-930 RGEHSSSSSH WRQEGLDVKT MMNTWTLQKG FPLITITVRG RNVHVKQEHY 551 600 ENSP00000296754/1-948 MKGSDGAPDT GYLWHVPLTF ITSKSDMVHR FLLKTKTDVL ILPEEVEWIK ENSBTAP00000018026/1-942 VKGAADAPET GFLWHVPLTF ITSKSDAVQR FLLKTRTDVL ILPEEVEWIK ENSTTRP00000015236/1-946 VKGPDAAAET GYLWHVPLTF ITSNSDSVQR FLLKTRTDVL ILPEEVEWIK bmy_21853T0/1-853 VKGPDDAPET GYLWHVPLTF ITSNSDSVQR FLLKTRTDVL ILPEEVEWIK BACU017797/1-930 VIGPDDAPET GYLWHVPLTF ITSNSDSVQR FLLKTRTDVL ILPEEVEWIK 601 650 ENSP00000296754/1-948 FNVGMNGYYI VHYEDDGWDS LTGLLKGTHT AVSSNDRASL INNAFQLVSI ENSBTAP00000018026/1-942 FNVGMNGYYI VHYEDDGWDS LTGLLKGTHT AISSNDRASL INNAFQLVSI ENSTTRP00000015236/1-946 FNVGMNGYYI VHYEDDGWDS LTGLLKGTHT AISSSDRASL INNAFQLVSI bmy_21853T0/1-853 FNVGMNGYYI VHYEDDGWDS LTGLLKGTXT AISSSDRASL INNAFQLVSI BACU017797/1-930 FNVGMNGYYI VHYEDDGWDS LTGLLKGTHT AISSSDRASL INNAFQLVSI 651 700 ENSP00000296754/1-948 GKLSIEKALD LSLYLKHETE IMPVFQGLNE LIPMYKLMEK RDMNEVETQF ENSBTAP00000018026/1-942 GKLSIEKALD LTLYLKHETE IMPVFQGLNE LIPMYKLMEK REMNEVETQF ENSTTRP00000015236/1-946 GKLSIEKALD LTLYLKRETE IMPVFQGLNE LIPMYKLMEK RDMNEVETQF bmy_21853T0/1-853 GKLSIEKALD LSLYLKHETE IMPVFQGLNE LIPMYKLMEK RDVNEVETQF BACU017797/1-930 GKLFFEKALD LSLYLKHETE IMPVFQGLNE LIPMYKLMEK RDVNEVETQF 701 750 ENSP00000296754/1-948 KAFLIRLLRD LIDKQTWTDE GSVSERMLRS QLLLLACVHN YQPCVQRAEG ENSBTAP00000018026/1-942 KAFLIRLLRD LIDKQTWTDE GSVSERMLRS QLLFLACVRK YQPCVQKAEG ENSTTRP00000015236/1-946 KAFLIGLLRD LIDKQTWTDE GSISERMLRS QLLLLACVRK YQPCVQ-AEC bmy_21853T0/1-853 KAFLIGLLRD LIDKQTWTDE GSISERMLRS QLLLLACVRK YQPCVQKAEG BACU017797/1-930 KAFLIGLLRD LIDKQTWTDE GSTSERMLRS QLLLLACVRK YQPCVQKAEG 751 800 ENSP00000296754/1-948 YFRKWKESNG NLSLPVDVTL AVFAVGAQST EGWDFLYSKY QFSLSSTEKS ENSBTAP00000018026/1-942 YFRQWQEAGG NLSLPNDVTL AVFAVGAQTL EGWDFLYSKY QSSLSSTEKN ENSTTRP00000015236/1-946 YFRQWQEANG NLRLPSDVTL AVFAVGAQNP EGWDFLYSKY QSSLSSTEKH bmy_21853T0/1-853 YFRQWQEANG NLSLPSDVTL AVFAVGAQNP EGWDFLYSKY QSSLSSTEKN BACU017797/1-930 YFRRWQEANG NLSLPSDVTL AVFAVGAQNP EGWDFLYSKY QSSLSSTEKN 801 850 ENSP00000296754/1-948 QIEFALCRTQ NKEKLQWLLD ESFKGDKIKT QEFPQILTLI GRNPVGYPLA ENSBTAP00000018026/1-942 QIEFALCISQ NKEKLQWLLD QSFKGDVIKT QEFPDILRAI GRNPVGYPLA ENSTTRP00000015236/1-946 QIEFALCITH DKEKLQWLLD QSFKGDTIKT QEFPDILRAI GRNPVGYPLA bmy_21853T0/1-853 QIEFALCVTH NKEKLQWLLE QSFKGDTIKT QEFPXILRAI GRNPVGYPLA BACU017797/1-930 QIEFALCITH NKEKLQWLLE QSFKGDTIKT QEFPDILRAI GRNPVGYPLA 851 900 ENSP00000296754/1-948 WQFLRKNWNK LVQKFELGSS SIAHMVMGTT NQFSTRTRLE EVKGFFSSLK ENSBTAP00000018026/1-942 WQFLRENWNK LVQKFELGSN SIAYMVTGTT DQFSTRARLE EVKEFFSSLK ENSTTRP00000015236/1-946 WQFLRENWNK LVQKFELGSS SIAYMVMGTT NQFSTRARLE EVKEFFSSLK bmy_21853T0/1-853 WQFLRENWNK LVQKFELGSS SIAYMVMGTT NQFSTRAXLE EVKEFFSSLK BACU017797/1-930 WQFLRENWNK LVQKFELGSN SIAYMVMGTT NQFSTRARLE EVKEFFSSLK 901 950 ENSP00000296754/1-948 ENGSQLRCVQ QTIETIEENI GWMDKNFDKI RVWLQSEKLE HDPEADATG ENSBTAP00000018026/1-942 ENGSQLRCVQ QTIETIEENI RWMDKNFDKI RAWLQNEKLN LL------- ENSTTRP00000015236/1-946 ENGSQLRCVQ QTIETIEENI RWMDKNFDKI RVWLQNEKLE HDPTNPTG- bmy_21853T0/1-853 ENGSQLRCVQ QTIETIEENI RWMDKNFDKI RVWLQNEKLE LL------- BACU017797/1-930 ENGSQLRCVQ QTIETIEENI RWMDKNFDKI RVWLQNEKLE LL-------