KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:31 2014 Check: 00 .. Name: ENSBTAP00000018042/1-278 Len: 343 Check: 5342 Weight: 1.00 Name: ENSP00000226279/1-300 Len: 343 Check: 4398 Weight: 1.00 Name: bmy_19094T0/1-281 Len: 343 Check: 8702 Weight: 1.00 Name: BACU001731/1-243 Len: 343 Check: 4757 Weight: 1.00 Name: ENSTTRP00000002369/1-219 Len: 343 Check: 3617 Weight: 1.00 // 1 50 ENSBTAP00000018042/1-278 ---------- -MADCC--TP RKKLCWCVLL FFLVAGITGG AIGI-YKWHY ENSP00000226279/1-300 MANCEFSPVS GDKPCCRLSR RAQLCLGVSI LVLILVVVLA VVVPRWRQ-- bmy_19094T0/1-281 ---------- ----MVLQSK TAAKHLCSKL PVMVPRKLGL ---------- BACU001731/1-243 ---------- ---MADPRPK KAKICLCVFL CLLAAGVIAV VVGIRMRRRS ENSTTRP00000002369/1-219 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000018042/1-278 SGLNRWHGAG STADFQKIIQ ERCDTYTQTI RPGSRSRNCQ AIRQAFMSAF ENSP00000226279/1-300 ----QWSGPG TTKRFPETVL ARCVKYTE-I HPEMRHVDCQ SVWDAFKGAF bmy_19094T0/1-281 ---------- ---------- ---------M SKYITDRDCQ KITEAFRNAF BACU001731/1-243 SEHMKWNGTG STAHFQEIVL ERCYNYTQLV QPALRDRDCQ KIREAFRNAF ENSTTRP00000002369/1-219 ---------- ---------- ---------- -----EVDCQ KIREAFRNAF 101 150 ENSBTAP00000018042/1-278 ISKDPCKATK EDYNSLINLA PPTVPCGQQV FWSKTKELAH EYAK-RRRLM ENSP00000226279/1-300 ISKHPCNITE EDYQPLMKLG TQTVPCNKIL LWSRIKDLAH QFTQVQRDMF bmy_19094T0/1-281 ISKYPCSATE EDYYPLMKLV HQTVPCDK-- -------LAH RYTKVQREMF BACU001731/1-243 ISKDPCSATE EDYHPLMKLV NQTVPCDKTV FWSKTKELAH QYTKAQREMF ENSTTRP00000002369/1-219 ISKDPCSATE EDYHPLMKLV NQMVPCDKTV FWSKSKELAH QYTKVQRDMF 151 200 ENSBTAP00000018042/1-278 TLEDTLLGYL ADGLRWCGEP GSSDLNIWSC PDWRKDCRTN YLSVFWEVLS ENSP00000226279/1-300 TLEDTLLGYL ADDLTWCGEF NTSKINYQSC PDWRKDCSNN PVSVFWKTVS bmy_19094T0/1-281 TLEDTLLGYM ADDLSWCGDA GSYELNYQSC PHWKKDCSNN FVSVFWDLLS BACU001731/1-243 TLEDTLLGYI ADDLSWCGDA GSHEMNYQSC PHWKKDCSNN FVSVFWGLLS ENSTTRP00000002369/1-219 TLEDTLMGYI ADDLNWCGVA GSYEMNYQSC PHWKEDCSNN FVSVFWDLVS 201 250 ENSBTAP00000018042/1-278 ERFAESACNT VRVVLNGSLE NAFDSMSIFG RVEAPNLRPQ --VELEAWLV ENSP00000226279/1-300 RRFAEAACDV VHVMLNGSRS KIFDKNSTFG SVEVHNLQPE KVQTLEAWVI bmy_19094T0/1-281 KRFAENACGV AQVVLNGSIS NAFDRKSTFG RVEVHNLNPK KVHTLQAWVI BACU001731/1-243 KRFAENACGV VQVVLNGSIS NAFDGKS--- ---------- ---------- ENSTTRP00000002369/1-219 KRFAENACGV VQVVLNGSIS NAFDRKSTFG RVEVHNLNPM KVHTLQAWVI 251 300 ENSBTAP00000018042/1-278 HDTGKPPSDS CSGSSIRKLK SILDGRNVKF RCMDNLS--- ---------- ENSP00000226279/1-300 HGGREDSRDL CQDPTIKELE SIISKRNIQF SCKNIYR--- ---------- bmy_19094T0/1-281 RDLGKFPSDS CSGSSINDLR LIIKQRNIKF TCQDYYSLRI HLADEPVCVA BACU001731/1-243 --------DS CSGSSINDLS WIIKQRNIKF TCQDNYR--- ---------- ENSTTRP00000002369/1-219 HDLGKSPSDS CSGSSINDLR QIIRQRNIKF TCQDNYS--- ---------- 301 350 ENSBTAP00000018042/1-278 ---------- ---------- -RDQFLQRS- ---------- --- ENSP00000226279/1-300 ---------- ---------- -PDKFLQCVK NPEDSSCTSE I-- bmy_19094T0/1-281 EAVQYTSTCT TQETRWWKAE DAGEFSVIIS TPEMGAFSSK VLK BACU001731/1-243 ---------- ---------- ---------- ---------- --- ENSTTRP00000002369/1-219 ---------- ---------- -SGKFLQCVK KPGDSSCR-- ---