KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:32 2014 Check: 00 .. Name: ENSP00000396747/1-345 Len: 1016 Check: 9157 Weight: 1.00 Name: ENSBTAP00000018048/1-336 Len: 1016 Check: 2542 Weight: 1.00 Name: ENSTTRP00000014750/1-237 Len: 1016 Check: 9540 Weight: 1.00 Name: bmy_00229T0/1-353 Len: 1016 Check: 4696 Weight: 1.00 Name: BACU011286/1-899 Len: 1016 Check: 5422 Weight: 1.00 // 1 50 ENSP00000396747/1-345 ---------- ---------- ---------- ------MTRG RAWGMRRAAA ENSBTAP00000018048/1-336 ---------- ---------- ---------- --------MT RKTGQAAAMM ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 MRNQEVLFPE PPVCLAGLGD GPVFGERVCR LRQEGRAGEG RGDLMKAGLQ 51 100 ENSP00000396747/1-345 GAGGARAAGP TGGASRL--- ---------- ---------- ---------- ENSBTAP00000018048/1-336 RARRGKAAGA GLRAMRRGA- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 SSDGSEDYGP SCDGMRVTAF LDVLGQDNLP ALARLEKYTF SGNIFSRQII 101 150 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 ARGLLDLFRD FSNNEEDFIT VVEIMVRLSE DAEPTVRAEL LEQIPPVAIF 151 200 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 LQENRSDFPV VLSERLAPIV VRCLTDPDNQ VRKSSQEVLL ILLEQDLIFQ 201 250 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 HDTESKVCPV LLALSAPDSD DEYRAEAVSI ICKLASVLSK STVERLQLPQ 251 300 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 FCELCGDGKL FPVWKVCATN FGDICHAVRQ EATEKFLGWP LYSRRRHHRL 301 350 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- --HPNAGRRS ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- -AEAATPPRG ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 RIRTRISPPG HRVQAAMVTC PQPAQVQVLS AALRAAQLDS VDEPERPPTE 351 400 ENSP00000396747/1-345 GARAGAQGCG GPRVGSADSR ALPAQPLACA RGR------- ---------- ENSBTAP00000018048/1-336 TIRRDPAAAW PPTPGADSAG PRPHSPQLRS RTR------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 GLKEVSISGP SPAPGGQPAP SASPARNELA AARTLQSTGP GEPGSGTSDR 401 450 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 LETDQRHGCS PLEEDKSKLQ DIIPQPLLDQ YVSMTDPARA QTVDTDIAKH 451 500 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 CAYSLPGVAL TLGRQNWHCL KDTYETLASD VQWKVLRTLA FSIHELAVIL 501 550 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 GDQLTAADLL PIFNGFLKDL DEVRIGVLKH LYDFLKVVAI LQKFYSNSES 551 600 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 AMGLNFINEL ILRFRHCSKW VGRQAFAFIC QAVVSEECIP VDQFVEHLLP 601 650 ENSP00000396747/1-345 ---------- ---------- --------SQ RLVCDPKAAS ALPDLAPDVF ENSBTAP00000018048/1-336 ---------- ---------- --------GW NHVGDPQAVN QATDVVPDVF ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU011286/1-899 SLLSLASDPV PNVRVLLAKA LRQTLLEKGR SRVGDPQAVS LALGLASDVF 651 700 ENSP00000396747/1-345 VLRVRLEETG EMFRVANCRG DMTVRELKEE LDLMVGIPFN LQRLQYLDEG ENSBTAP00000018048/1-336 AMRVLLEDSG EMFRVTNCRS NMTVRELKEE LDLTAGIPFN LQRLQYLDQG ENSTTRP00000014750/1-237 ---------- -VFRVTGCRS DMTVRELKEE LDLIAGIPFS LQRLQYLDQG bmy_00229T0/1-353 ---------- -MFRVTGCRS DMTVRELKEE LDLIAGIPFN LQRLQYLDQG BACU011286/1-899 ALRVLLEDSG EMFRVTGCRS DMTVRELKEE LDLIAGIPFN LQRLQYLDQG 701 750 ENSP00000396747/1-345 VLMDDTTLKF HDVVPGGIIS LCIWHHDGWT ELVLAAVEGD PSK------- ENSBTAP00000018048/1-336 ILMDDATLKF HDVIPGGIIS LCIWHYDGWT ELVLAAVEGD SSK------- ENSTTRP00000014750/1-237 ILMDDATLRC HDVVPGGIIS LRIWHYDGWT ELVLAAVEGD SSK------- bmy_00229T0/1-353 ILMDDATLKF HDVVPGGIIS LCIWHYDGWA ELVLAAVEGD SSKNCCRPAG BACU011286/1-899 ILMDNATLKF HDVVPGGIIS LRIWHYDGWM ELVLAAVEGD SSK------- 751 800 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 GPSHPASPHT GCCTSATGFL SVGARSRRPV LRALILHVMI ISRGCYSPGS BACU011286/1-899 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000396747/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018048/1-336 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014750/1-237 ---------- ---------- ---------- ---------- ---------- bmy_00229T0/1-353 RVQSVPKVNG DNGPKNRPEG QDPSHLQRSL CPSGEAVPCR LGSSFRATHV BACU011286/1-899 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000396747/1-345 --------LS CLGLTEDSFY RTANSEHFEG EKWKHWTSQR AFVALYVASH ENSBTAP00000018048/1-336 --------LA CLGVAEDTFY RTANSGRFDD RQWKKWISQR AFVALYVASH ENSTTRP00000014750/1-237 --------LS CLGVAEDAFH RTTNSQHFDD KQWKKWISQR AFMALYVASH bmy_00229T0/1-353 RNSVYLAQLS CLGVAEDSFY RTTNSQHFDD KQWKKWIXQR AFMALYVASH BACU011286/1-899 --------LS CLGVAEDSFY RTTNSQHFDD KQWKKWISQR AFMALYVASH 901 950 ENSP00000396747/1-345 RGHFDAVQYL LEHGASCLSR SPLGRTPLHV AAAMGRSDCI ILLLQHGASI ENSBTAP00000018048/1-336 RGHSEAVQYL LEHGANCQGR SPVGRTPLHV AAAMSRLDCI SLLLNYGASI ENSTTRP00000014750/1-237 RGRSEAVQYL LEHGANCQGR SPVGRTPLHV AAAMSRLDCI SLQLNYEASI bmy_00229T0/1-353 RGHSEAVQYL LEHGANCQGR SPVGRTPLHV AAAMSRLDCI SLLLKYGASI BACU011286/1-899 RGHSEAVQYL LEHGANCQGR SPVGRTPLHV AAAMSRLDCI SLLLKHGASI 951 1000 ENSP00000396747/1-345 HDRDAKGETP ISIAHRLNHT LSERQMVLLH RIAKSGIRDL NDLVMKNALQ ENSBTAP00000018048/1-336 NDKDAKGETP MSVARRLNRT QSERRMFLFY WLVKMGTKDP LDPVVNKAFR ENSTTRP00000014750/1-237 NDRDTKGETP MSLACRLNRS -SRWWMFLFY WMVKLGTKDP MDPVVNKAFQ bmy_00229T0/1-353 NDRDAKGETP MSLACRLNRS QSRWRMFLFY WMVKLGTKDP RDPVVNKAFQ BACU011286/1-899 NDRDAKGETP MSLACRLNRS QSRRRMFLFY WMVELGTKDP MDPVVNKTFR 1001 1050 ENSP00000396747/1-345 RVKSGFRSEK MTMTPH ENSBTAP00000018048/1-336 RVKSGF---- ------ ENSTTRP00000014750/1-237 RVKAGFGSKK ENKT-- bmy_00229T0/1-353 RVKAGFGSKK ENKT-- BACU011286/1-899 RVKAGFGSKK ENKT--