KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:32 2014 Check: 00 .. Name: ENSP00000444408/1-541 Len: 551 Check: 947 Weight: 1.00 Name: ENSBTAP00000018050/1-539 Len: 551 Check: 4922 Weight: 1.00 Name: ENSTTRP00000012257/1-541 Len: 551 Check: 3693 Weight: 1.00 Name: bmy_06592T0/1-465 Len: 551 Check: 1269 Weight: 1.00 Name: BACU002143/1-541 Len: 551 Check: 5625 Weight: 1.00 // 1 50 ENSP00000444408/1-541 MVADPPR-DS KGLAAAEPTA NGGLALASIE DQGAAAGGYC GSRDQVRRCL ENSBTAP00000018050/1-539 MVADPPKGDP KGYAAAEPTA NGVSMLVPIE DVGSLKGGRC GSGDQVRRCL ENSTTRP00000012257/1-541 MVADPPKGDP KEYAAAEPTA NGVSALVPLE DLGSAKGGCC GSGDQVRRCL bmy_06592T0/1-465 MVADPPKGDP KGYAAAEPTA NGVSVLVPLE DPGSAKGGCC GSGDQVRRCL BACU002143/1-541 MVADPPKGDP KGYAAAEPTA NGVSALVPLE DPGSAKGGCC GSGDRVRRCL 51 100 ENSP00000444408/1-541 RANLLVLLTV VAVVAGVALG LGVSGAGGAL ALGPERLSAF VFPGELLLRL ENSBTAP00000018050/1-539 RANLLVLLTV VAVVAGVALG LGVSGAGGAL ALGPARLEAF SFPGELLLRL ENSTTRP00000012257/1-541 RANLLVLLTV VAVVAGVALG LGVSGAGGAL ALGPARLEAF AFPGELLLRL bmy_06592T0/1-465 RANLLVLLTV VAVVAGVALG LGVSGAGGAL ALGPARLEAF AFPGELLLRL BACU002143/1-541 RANLLVLLTV VAVVAGVALG LGVSGAGGAL ALGPARLEAF AFPGELLLRL 101 150 ENSP00000444408/1-541 LRMIILPLVV CSLIGGAASL DPGALGRLGA WALLFFLVTT LLASALGVGL ENSBTAP00000018050/1-539 LKMIILPLVV CSLIGGAASL DPSALGRLGA WALLFFLVTT LLASALGVGL ENSTTRP00000012257/1-541 LKMIILPLVV CSLIGGAASL DPSALGRLGA WALLFFLVTT LLASALGVGL bmy_06592T0/1-465 LKMIILPLVV CSLIGGAASL DPSALGRLGA WALLFFLVTT LLASALGVGL BACU002143/1-541 LKMIILPLVV CSLIGGAASL DPSALGRLGA WALLFFLVTT LLASALGVGL 151 200 ENSP00000444408/1-541 ALALQPGAAS AAINASVGAA GSAENAPSKE VLDSFLDLAR ---------N ENSBTAP00000018050/1-539 ALALQPGAAF AAINTSVGA- -PVEEAPSKE VLDSFLDLVR ---------N ENSTTRP00000012257/1-541 ALALQPGAAF AAINSSVEAT GSVEEAPSKE VLDSFLDLVR ---------N bmy_06592T0/1-465 ALALQPGAAF AAINASVGAI GSVEEAPSKE VLDSFLDLVR SDPALPVEGN BACU002143/1-541 ALALQPGAAF AAINASVGAM GSVEEAPSKE VLDSFLDLVR ---------N 201 250 ENSP00000444408/1-541 IFPSNLVSAA FRSYSTTYEE RNITGTRVKV PVGQEVEGMN ILGLVVFAIV ENSBTAP00000018050/1-539 IFPSNLVSAA FRSYTTSYKE RLFNGTLVKV PTGGEVEGMN ILGLVVFAII ENSTTRP00000012257/1-541 IFPSNLVSAA FRSYATSYKE RLFNGTQVKV PMGGEVEGMN ILGLVVFAII bmy_06592T0/1-465 IFPSNLVSAA FRS------- ---------- ---------- ---------- BACU002143/1-541 IFPSNLVSAA FRSYATSYKE RLFNGTQVKV PVGGEVEGMN ILGLVVFAIV 251 300 ENSP00000444408/1-541 FGVALRKLGP EGELLIRFFN SFNEATMVLV SWIMWYAPVG IMFLVAGKIV ENSBTAP00000018050/1-539 FGVALRKLGP EGELLIRFFN SFNDATMVLV SWIMWYAPVG ILFLVAGKIV ENSTTRP00000012257/1-541 FGVALRKLGP EGELLIRFFN SFNDATMVLV SWIMWYAPVG ILFLVAGKIM bmy_06592T0/1-465 ---------- ---------- ---------- ---------- --------IV BACU002143/1-541 FGVALRKLGP EGELLIRFFN SFNDATMVLV SWIMWYAPVG ILFLVAGKIV 301 350 ENSP00000444408/1-541 EMEDVGLLFA RLGKYILCCL LGHAIHGLLV LPLIYFLFTR KNPYRFLWGI ENSBTAP00000018050/1-539 EMENVGLLFA SLGKYILCCL LGHAIHGLLT LPLIYFLFAR KNPYRFLWGI ENSTTRP00000012257/1-541 EMEDVGMLFA SLGKYILCCL LGHAIHGLLV LPFIYFFFTR KNPYRFLWGI bmy_06592T0/1-465 EMEDVGMLFA SLGKYILCCL LGHAIHGLLV LPLIYFLFTR KNPYRFLWGI BACU002143/1-541 EMEDVGMLFA SLGKYILCCL LGHAIHGLLV LPLIYFFFTR KNPYRFLWGI 351 400 ENSP00000444408/1-541 VTPLATAFGT SSSSATLPLM MKCVEENNGV AKHISRFILP IGATVNMDGA ENSBTAP00000018050/1-539 MTPLATAFGT SSSSATLPLM MKCVEEKNGV ARHISRFILP IGATVNMDGA ENSTTRP00000012257/1-541 MTPLATAFGT SSSSATLPLM MKCVEEKNGV AKHISRFILP IGATVNMDGA bmy_06592T0/1-465 MTPLATAFGT SSSSATLPLM MKCVEEKNGV AKHISRFILP IGATVNMDGA BACU002143/1-541 MTPLATAFGT SSSSATLPLM MKCVEEKNGV AKHISRFILP IGATVNMDGA 401 450 ENSP00000444408/1-541 ALFQCVAAVF IAQLSQQSLD FVKIITILVT ATASSVGAAG IPAGGVLTLA ENSBTAP00000018050/1-539 ALFQCVAAVF IAQLNHRSLD FVKIITILVT ATASSVGAAG IPSGGVLTLA ENSTTRP00000012257/1-541 ALFQCVAAVF IAQLNQRSLD FMKIITILVT ATASSVGAAG IPAGGVLTLA bmy_06592T0/1-465 ALFQCVAAVF IAQLNQRSLD LVKIITILVT ATASSVGAAG IPAGGVLTLA BACU002143/1-541 ALFQCVAAVF IAQLNQRSLD FVKIITILVT ATASSVGAAG IPAGGVLTLA 451 500 ENSP00000444408/1-541 IILEAVNLPV DHISLILAVD WLVDRSCTVL NVEGDALGAG LLQNYVDRTE ENSBTAP00000018050/1-539 IILEAVNLPV HDISLILAVD WLVDRSCTVL NVEGDAFGAG LLQSYLDRTE ENSTTRP00000012257/1-541 IILEAVSLPV HDISLILAVD WLVDRSCTVL NVEGDAFGAG LLQNYVDRTE bmy_06592T0/1-465 IILEAVSLPV HDISLILAVD WLVDRSCTVL NVEGDAFGAG LLQNYVDRTE BACU002143/1-541 IILEAVSLPV HDISLILAVD WLVDRSCTVL NVEGDAFGAG LLQSYVDRTE 501 550 ENSP00000444408/1-541 SRSTEPELIQ VKSELPLDPL PVPTEEGNPL LKHYRGPAGD ATVASEKESV ENSBTAP00000018050/1-539 NCNSVPELIQ VKSEMPLAAL PVPGEEGNPL LKGCPGPAGD ADT-CEKESV ENSTTRP00000012257/1-541 SRSSVPELIH VKSEAPLAAL PDHTEEGNPL LKRCPGPAGD ADT-CEKESV bmy_06592T0/1-465 SRSSVPELIQ VKSEAPLAAR PVLTEEGSPL LKRCPGPAGD ADT-CEKESV BACU002143/1-541 SRSSVPELIQ VKSEAPLAAR PVLTEEGSPL LKRCPGPAGA ADT-CEKESV 551 600 ENSP00000444408/1-541 M ENSBTAP00000018050/1-539 M ENSTTRP00000012257/1-541 M bmy_06592T0/1-465 M BACU002143/1-541 M