KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:33 2014 Check: 00 .. Name: bmy_08241T0/1-363 Len: 372 Check: 7152 Weight: 1.00 Name: ENSP00000256255/1-339 Len: 372 Check: 3473 Weight: 1.00 Name: ENSBTAP00000018052/1-335 Len: 372 Check: 7082 Weight: 1.00 Name: BACU005215/1-349 Len: 372 Check: 7628 Weight: 1.00 Name: ENSTTRP00000003404/1-298 Len: 372 Check: 5162 Weight: 1.00 // 1 50 bmy_08241T0/1-363 MVAAGGPEAA GRCALFSLLL LLLIAGSARG WHDPDRILLR DIKALTLHYD ENSP00000256255/1-339 MAAACGPGAA GYCLLLGLHL FLLTAGPALG WNDPDRMLLR DVKALTLHYD ENSBTAP00000018052/1-335 MAAAGGPAAA GRCALSSLLL LLLVVGTAQC WDERDRILLR DIKALTLYYD BACU005215/1-349 MVAAGGPEAA GRCALFSLLL LLLIAGSARG WHDPDRILLR DIKALTLHYD ENSTTRP00000003404/1-298 ---------- ---------- ---------- -----RVLLR DIKALTLHYD 51 100 bmy_08241T0/1-363 RYTTSRRLDP IPQLKCVGGT AGCDSYTPKV IQCQNKGWDG YDVQWECKTD ENSP00000256255/1-339 RYTTSRRLDP IPQLKCVGGT AGCDSYTPKV IQCQNKGWDG YDVQWECKTD ENSBTAP00000018052/1-335 RYTTSRRLEP IPQLKCVGGT AGCDSYTPKV IQCQNRGWDG YDVQWECKTD BACU005215/1-349 RYTTSRRLDP IPQLKCVGGT AGCDSYTPKV IQCQNKGWDG YDVQWECKTD ENSTTRP00000003404/1-298 RYTTSRRLDP IPQLKCVGGT AGCDSYTPKV IQCQNKGWDG YDVQWECKTD 101 150 bmy_08241T0/1-363 LDIAYKFGKT VVSCEGYESS EDQYVLRGSC GLEYHLDYTE LGLKKLRESG ENSP00000256255/1-339 LDIAYKFGKT VVSCEGYESS EDQYVLRGSC GLEYNLDYTE LGLQKLKESG ENSBTAP00000018052/1-335 LDVAYKFGKT VVSCEGYESS EDQYVLRGSC GLEYQLDYTE LGLKKLRESG BACU005215/1-349 LDIAYKFGKT VVSCEGYESS EDQYVLRGSC GLEYHLDYTE LGLKKLRESG ENSTTRP00000003404/1-298 LDIAYKFGKT VVSCEGYESS EDQYVLRGSC GLEYHLDYTE LGLKKSRESG 151 200 bmy_08241T0/1-363 KKHGFNSFSD YYNKLYSRES CSISGVLTIV VLLALAFGVY KFFLSDGHDS ENSP00000256255/1-339 KQHGFASFSD YYYKWSSADS CNMSGLITIV VLLGIAFVVY KLFLSDGQYS ENSBTAP00000018052/1-335 KEHGFNSFSN YYSKLYSPES SSLGGVVTIV VLLAIAFGVY KFFLSDGHES BACU005215/1-349 KSHGFNSFSD YYNKLYSRES CSISGVLTIV VLLALAFGVY KFFLSDGHDS ENSTTRP00000003404/1-298 KNHGFNSFSD YYNKLYSRES CSISGVLTIV VLLAIAFGVY KFFLSNGHDS 201 250 bmy_08241T0/1-363 PPPYSEHPPH SHRYQRFTNS AGPPPAGFKS EFTGP----H GATSGFGSAF ENSP00000256255/1-339 PPPYSEYPPF SHRYQRFTNS AGPPPPGFKS EFTGPQNTGH GATSGFGSAF ENSBTAP00000018052/1-335 PPPYSEDPPY SHRYQRFSSS AGPPPAGFKS EFTGP----H GATAGFGSAF BACU005215/1-349 PPPYSEYPPH SHRYQRFTNS AGPSTAGFKS EFTGP----H GATSGFGSAF ENSTTRP00000003404/1-298 PPPYSEYPPY SHRYQRFTNS EGPSPAGFKS EFTGP----H GAASGFGNAF 251 300 bmy_08241T0/1-363 TGQQGHENSG PGFWTGLGTG GILGYLFGSN RKIN-YEQQH PFLTRGTTHP ENSP00000256255/1-339 TGQQGYENSG PGFWTGLGTG GILGYLFGSN RAATPFSDSW YYPSYPPSYP ENSBTAP00000018052/1-335 TGQQGHEHSG PGFWTGLGTG GILGYLFGSN RAATPFSDSW -YPSYPPSYT BACU005215/1-349 TGQQGHENSG PGFWTGLGTG GILGYLFGSN RAATPFSDSW YYPSYPPSYS ENSTTRP00000003404/1-298 TGQQGHENSG PGFWTGLGTG GILGYLFGSN RAATPFSDSW YYPS---SYS 301 350 bmy_08241T0/1-363 T----LPHTP ARGIAVPTHH FVETQEAIQR VQAQSQEPEQ HQDTVVPEDD ENSP00000256255/1-339 GTWN-RAYSP LHG-GSGSYS VCSNSDTKTR TASGYGGTRR ---------- ENSBTAP00000018052/1-335 STWNSRAYSP LRG-GPGSSS ACSGSEPRTR TASGYGGTRR ---------- BACU005215/1-349 STWNSRAYSP LHG-DPGSYS ACSSSEPRTR TASGESKKSR SSYSVKYRNN ENSTTRP00000003404/1-298 SSWNRRAYSP LRG-DPGSYS ACSSSEPKTR TASGYGGTRR ---------- 351 400 bmy_08241T0/1-363 KKVKSWGQTL DAKLLIFHHF LL ENSP00000256255/1-339 ---R------ ---------- -- ENSBTAP00000018052/1-335 ---R------ ---------- -- BACU005215/1-349 LELR------ ---------- -- ENSTTRP00000003404/1-298 ---R------ ---------- --