KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:34 2014 Check: 00 .. Name: ENSTTRP00000009851/1-1260 Len: 1346 Check: 1476 Weight: 1.00 Name: ENSP00000386660/1-1321 Len: 1346 Check: 8127 Weight: 1.00 Name: ENSBTAP00000018069/1-1320 Len: 1346 Check: 6567 Weight: 1.00 Name: bmy_20088T0/1-1285 Len: 1346 Check: 6484 Weight: 1.00 Name: BACU005895/1-1322 Len: 1346 Check: 7371 Weight: 1.00 // 1 50 ENSTTRP00000009851/1-1260 ---------- ---------- ---------- ---------- ---------- ENSP00000386660/1-1321 MVLTLGESWP VLVGRRFLSL SAADGSDGSH DSWDVERVAE WPWLSGTIRA ENSBTAP00000018069/1-1320 MVLTLGESWP VLVGKRFLSL SAG---DGGH DSWDVERVAE WPWLSGTIRA bmy_20088T0/1-1285 MVLTLGESWP VLVGKRFLSL SAADGSDGGH DSWDLERVAE WPWLSGTIRA BACU005895/1-1322 MVLTLGESWP VLVGKRFLSL SAADGSDGGH DSWDLERVAE WPWLSGTIRA 51 100 ENSTTRP00000009851/1-1260 ---------- --VCVEFDGE SWRKRRWIDV YSLLRRAFLV EHNLVLAERK ENSP00000386660/1-1321 VSHTDVTKKD LKVCVEFDGE SWRKRRWIEV YSLLRRAFLV EHNLVLAERK ENSBTAP00000018069/1-1320 VSHTDVTKKD LKVCVEFDGE SWRKRRWIDV YSLLRRAFLV EHNLVLAERK bmy_20088T0/1-1285 VSHTDVTKKD LKVCVEFDGE SWRKRRWIDV YSLLRRAFLV EHNLVLAERK BACU005895/1-1322 VSHTDVTKKD LKVCVEFDGE SWRKRRWIDV YSLLRRAFLV EHNLVLAERK 101 150 ENSTTRP00000009851/1-1260 SPEVSERIVQ WPAIMYRPLL DKAGLGSITS IRFLGDQQRV FLSKDLLKPI ENSP00000386660/1-1321 SPEISERIVQ WPAITYKPLL DKAGLGSITS VRFLGDQQRV FLSKDLLKPI ENSBTAP00000018069/1-1320 SPEISERIVQ WPAIMYKSLL DKAGLGSITS VRFLGDQQRV FLSKDLLKPI bmy_20088T0/1-1285 SPEVSERIVQ WPAIMYRSLL DKAGLGSITS IRFLGDQQRV FLSKDLLKPI BACU005895/1-1322 SPEVSERIVQ WPAIMYRSLL DKAGLGSITS IRFLGDQQRV FLSKDLLKPI 151 200 ENSTTRP00000009851/1-1260 Q--------- ---------- ---DVNNLRL SLIDNQXXXX XXXXXXXXXX ENSP00000386660/1-1321 Q--------- ---------- ---DVNSLRL SLTDNQIVSK EFQALIVKHL ENSBTAP00000018069/1-1320 Q--------- ---------- ---DVNNLRL SLMDNQSVSK EFQALIVKHL bmy_20088T0/1-1285 QILSFLTPTA PFVNKNAFGI LVRDVNNLRL SLIDNQNVSK EFQALIVKHL BACU005895/1-1322 Q--------- ---------- ---DVNNLRL SLIDNQSVSK EFQALIVKHL 201 250 ENSTTRP00000009851/1-1260 XXXXXXXXDK NLVGSEVKIY SLDPSTQWFS ATIVNGNPTS KTLQVNCEEI ENSP00000386660/1-1321 DESHLLKGDK NLVGSEVKIY SLDPSTQWFS ATVINGNPAS KTLQVNCEEI ENSBTAP00000018069/1-1320 DESHLLQGDK NLVGSEVKIY SLDPSTQWFS ATIVNGNPMS KTLQVNCEEI bmy_20088T0/1-1285 DESHLLQGDK NLVGSEVKIY SLDPSTQWFS ATIVNGNPTS KTLQVNCEEI BACU005895/1-1322 DESHLLQGDR NLVGSEVKIY SLDPSTQWFS ATIVNGNPTS KTLQVNCEEI 251 300 ENSTTRP00000009851/1-1260 PALKIVDPSL IHVEVVHDNF VTCGNSTRIG AIKRKSSENN GSLVSKQAKS ENSP00000386660/1-1321 PALKIVDPSL IHVEVVHDNL VTCGNSARIG AVKRKSSENN GTLVSKQAKS ENSBTAP00000018069/1-1320 PALKIVDPSL IHVEVVHDNF VTCGNSIRMG AVKRKSSENN GNLVSKQAKS bmy_20088T0/1-1285 PALKIVDPSL IHVEVVHDNF VTCGNSTRIG AVKRKSSENN GSLVSKQAKS BACU005895/1-1322 PALKIVDPSL IHVEVVHDNF VTCGNSTRIG AVKRRSSENN GSLVSKQAKS 301 350 ENSTTRP00000009851/1-1260 CSEASPSVCP VQSVPTTVFK EILLGCTAAT PPSKDPRHQS TPQAANSPPN ENSP00000386660/1-1321 CSEASPSMCP VQSVPTTVFK EILLGCTAAT PPSKDPRQQS TPQAANSPPN ENSBTAP00000018069/1-1320 CSEASPSVCP VQSVPTTVFK EILLGCTAAT PPSKDPRQQS TPQAANSPPN bmy_20088T0/1-1285 CSEASPSVCP VQSVPTTVFK EILLGCTAAT PPSKDPRHQS TPQAANSPPN BACU005895/1-1322 CSEASPSVCP VQSVPTTVFK EILLGCTAAT PPSKDPRHQG TPQAANSPPN 351 400 ENSTTRP00000009851/1-1260 LGAKIPQGSH KQILP-ELSS CLNTKPEILR T-PDVVCKVG LLSSKSSQIG ENSP00000386660/1-1321 LGAKIPQGCH KQSLPEEISS CLNTKSEALR TKPDV-CKAG LL-SKSSQIG ENSBTAP00000018069/1-1320 LGAKIPQGCH KQILP-ELSS CLNTKPEILR TKPDVACKVD LLSSKSSQIG bmy_20088T0/1-1285 LGAKIPQGSH KQILP-ELSS CLNTKPEILR T-PDVVCKVG LLSSKSSQIG BACU005895/1-1322 LGAKIPQGSH KQILP-ELSS CLNTKPEIVR T-PDVVCKVG LLSSKSSQIG 401 450 ENSTTRP00000009851/1-1260 TGDLKTLSEP KGSYTQLKTN TDQESSLESF PPSSTDLPRE CLPTKPSSTA ENSP00000386660/1-1321 TGDLKILTEP KGSCTQPKTN TDQENRLESV PQALTGLPKE CLPTKASSKA ENSBTAP00000018069/1-1320 TGDLKTLNEP KESCSQLKTS TEEESSVESL PPTSTDPPKE CIPIKAASVA bmy_20088T0/1-1285 TGDLKTLSEP KGNYTQLKTN TDQESSLESF PPSSTDLPKE CLPTKASSTA BACU005895/1-1322 TGDLKTLSEP KGNYTQLKTN TDQESSLESF PPSSTDLPKE CLPTKASSTA 451 500 ENSTTRP00000009851/1-1260 ELEIASTPEL QKHLEHGPST SDVLSNKPEE KADVNSXXXX XXXXXXXXXX ENSP00000386660/1-1321 ELEIANPPEL QKHLEHAPSP SDV-SNAPEV KAGVNSDSPN NCSGKKVEPS ENSBTAP00000018069/1-1320 ELEITNTPEL QKHFEHAPST SDVLSKKPEE KAAVNSNSPD SCIEKRGEPS bmy_20088T0/1-1285 ELEIASTPEL QKHLEHGPST SDVLSNKPEE TADVNSNSPN CCVENKVEPS BACU005895/1-1322 ELEIASTPEL QKHLERGPST SDVLPNKPEE KADVNSNSPN CCVEKKVEPS 501 550 ENSTTRP00000009851/1-1260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXPSRKSVLT DPAKLKKLQQ ENSP00000386660/1-1321 ALACRSQNLK ESSVKVDNES CCSRSNNKIQ NAPSRKSVLT DPAKLKKLQQ ENSBTAP00000018069/1-1320 TLGCQSQNIK SSSAKVDPES CCTRSNNKFQ NAPSRKSVLT DPAKLKKLQQ bmy_20088T0/1-1285 TLGCQSQNLK ESSAKVDTES CCTRSNNKIQ NAPSRKSVLT DPAKLKKLQQ BACU005895/1-1322 TLGCQSQNLK ESSAKVDTES CCTRSNNKIQ NAPSRKSVLT DPAKLKKLQQ 551 600 ENSTTRP00000009851/1-1260 SGEAFVQDDS CVNIVAQLPK CRECRLDSLR KDKEQQKDSP VFCRFFHFRR ENSP00000386660/1-1321 SGEAFVQDDS CVNIVAQLPK CRECRLDSLR KDKEQQKDSP VFCRFFHFRR ENSBTAP00000018069/1-1320 SGEAFVQDDS CVNIVAQLPK CRECRLDSLR KDKEQQKDSP VFCRFFHFRR bmy_20088T0/1-1285 SGEAFVQDDS CVNIVAQLPK CRECRLDSLR KDKEQQKDSP VFCRFFHFRR BACU005895/1-1322 SCEAFVQDDS CVNIVAQLPK CRECRLDSLR KDKEQQKDSP VFCRFFHFRR 601 650 ENSTTRP00000009851/1-1260 LQFNKHGVLR VEGFLTPNKY DSEAIGLWLP LTKNVVGTDL DTAKYILANI ENSP00000386660/1-1321 LQFNKHGVLR VEGFLTPNKY DNEAIGLWLP LTKNVVGIDL DTAKYILANI ENSBTAP00000018069/1-1320 LQFNKHGVLR VEGFLTPNKY DSEAIGLWLP LTRNVVGTDL DTAKYILANI bmy_20088T0/1-1285 LQFNKHGVLR VEGFLTPNKY DSEAIGLWLP LTKNVVGTDL DTAKYILANI BACU005895/1-1322 LQFNKHGVLR VEGFLTPNKY DSEAIGLWLP LTKNVVGTDL DTAKYILANI 651 700 ENSTTRP00000009851/1-1260 GDHFCQMVIS EKEAMSTIEP HRQVAWKRAV KGVREMCDVC DTTIFNLHWV ENSP00000386660/1-1321 GDHFCQMVIS EKEAMSTIEP HRQVAWKRAV KGVREMCDVC DTTIFNLHWV ENSBTAP00000018069/1-1320 GDHFCQMVIS EKEAMSTIEP HRQVAWKRAV KGVREMCDVC DTTIFNLHWV bmy_20088T0/1-1285 GDHFCQMVIS EKEAMSTIEP HRQVAWKRAV KGVREMCDVC DTTIFNLHWV BACU005895/1-1322 GDHFCQMVIS EKEAMSTIEP HRQVAWKRAV KGVREMCDVC DTTIFNLHWV 701 750 ENSTTRP00000009851/1-1260 CPRCGFGVCV DCYRMKRKNC QQGAAYKTFS WLRCVKSQIH EPENLMPTQI ENSP00000386660/1-1321 CPRCGFGVCV DCYRMKRKNC QQGAAYKTFS WLKCVKSQIH EPENLMPTQI ENSBTAP00000018069/1-1320 CPRCGFGVCV DCYRMKRKNC QQGAAYKTFN WLRCVKSQIH EPENLMPTQI bmy_20088T0/1-1285 CPRCGFGVCV DCYRMKRKNC QQGAAYKTFS WLRCVKSQIH EPENLMPTQI BACU005895/1-1322 CPRCGFGVCV DCYRMKRKNC QQGAAYKTFS WLRCVKSQIH EPENLMPTQI 751 800 ENSTTRP00000009851/1-1260 IPGKALYDVG DIVHSVRAKW GIKANCPCSN RQFKLFSKPA SKEDIKQTSL ENSP00000386660/1-1321 IPGKALYDVG DIVHSVRAKW GIKANCPCSN RQFKLFSKPA SKEDLKQTSL ENSBTAP00000018069/1-1320 IPGKALYDVG DIVHSVRAKW GIKANCPCSN RQFKLFSKPA SKEDIKQTSL bmy_20088T0/1-1285 IPGKALYDVG DIVHSVRAKW GIKANCPCSN RQFKLLAKPA SKEDIKQTSL BACU005895/1-1322 IPGKALYDVG DIVHSVRAKW GIKANCPCSN RQFKLLSKPA SKEDIKQTSL 801 850 ENSTTRP00000009851/1-1260 VGEKSTLGAG LQQSPSVLEP VAVGGEAASK PASSVKPACP ASTSPLNWLA ENSP00000386660/1-1321 AGEKPTLGAV LQQNPSVLEP AAVGGEAASK PAGSMKPACP ASTSPLNWLA ENSBTAP00000018069/1-1320 TGEKATLGAM LPQNPSGLEP VTVGGEAASK PASSVKPACP ASTSPLNWLA bmy_20088T0/1-1285 VGEKSTLGAV LQQNPSVLEP VAVGGEAASK PASSARPACP ASTSPLNWLA BACU005895/1-1322 VGEKSTLGAV LQQNPSVLEP VAVGGEAASK PASSVKPACP ASTSPLNWLA 851 900 ENSTTRP00000009851/1-1260 DLTSGNVNKE NKEKQPTMPI LKNEIKCLPP LPPLSKSNTV LHTFNSTILT ENSP00000386660/1-1321 DLTSGNVNKE NKEKQPTMPI LKNEIKCLPP LPPLSKSSTV LHTFNSTILT ENSBTAP00000018069/1-1320 DLTSGNVNKE NKEKQPAMPI LKNEIKCLPP LPPLCKSSTV LHTFNSTILT bmy_20088T0/1-1285 DLTSGNVNKE NKEKQPTMPI LKNEIKCLPP LPPLSKSNTV LHTFNSTILT BACU005895/1-1322 DLTSGNVNKE NKEKQPTMPI LKNEIKCLPP LPPLSKSNTV LHTFNSTILT 901 950 ENSTTRP00000009851/1-1260 PVSNNNSGFL RNLLNSSAGK TENGLKNTPK ILDDIFASLV QNKTCSDLSK ENSP00000386660/1-1321 PVSNNNSGFL RNLLNSSTGK TENGLKNTPK ILDDIFASLV QNKTTSDLSK ENSBTAP00000018069/1-1320 PVSNNSSGFL RNLLNSSTGK TENGLKNTPK ILDDIFASLV QNKTCSDLSK bmy_20088T0/1-1285 PVSNNNSGFL RNLLNSSAGK TENGLKNTPK ILDDIFASLV QNKTCSDLSK BACU005895/1-1322 PVSNNNSGFL RNLLNSSAGK TENGLKNTPK ILDDIFASLV QNKTCSDLSK 951 1000 ENSTTRP00000009851/1-1260 RPQGLTIKPS ILGFDTPHYW LCDSRLLCLQ DPNNKSNWNV FRECWKQGQP ENSP00000386660/1-1321 RPQGLTIKPS ILGFDTPHYW LCDNRLLCLQ DPNNKSNWNV FRECWKQGQP ENSBTAP00000018069/1-1320 RPQGLTIKPS ILGFDTPHYW LCDNRLLCLQ DPNNKSNWNV FRECWKQGQP bmy_20088T0/1-1285 RPQGLTIKPS ILGFDTPHYW LCDSRLLCLQ DPNNKSNWNV FRECWKQGQP BACU005895/1-1322 RPQGLTIKPS ILGFDTPHYW LCDSRLLCLQ DPNNKSNWNV FRECWKQGQP 1001 1050 ENSTTRP00000009851/1-1260 VMVSGVHHKL NTELWKPESF RKEFGNQEVD LVNCRTNEII TGATVGDFWD ENSP00000386660/1-1321 VMVSGVHHKL NSELWKPESF RKEFGEQEVD LVNCRTNEII TGATVGDFWD ENSBTAP00000018069/1-1320 VMVSGVHHKL NTELWKPESF RREFGNQEVD LVNCRTNEII TGATVGDFWD bmy_20088T0/1-1285 VMVSGVHHKL NTELWKPESF RKEFGNQEVD LVNCRTNEII TGATVGDFWD BACU005895/1-1322 VMVSGVHHKL NTELWKPESF RKEFGNQEVD LVNCRTNEII TGATVGDFWD 1051 1100 ENSTTRP00000009851/1-1260 GFEDVPNRLK NEKEPMVLKL KDWPPGEDFR DMMPSRFDDL MANIPLPEYT ENSP00000386660/1-1321 GFEDVPNRLK NEKEPMVLKL KDWPPGEDFR DMMPSRFDDL MANIPLPEYT ENSBTAP00000018069/1-1320 GFEDVPNRLK NEKEPMVLKL KDWPPGEDFR DMMPSRFDDL MANIPLPEYT bmy_20088T0/1-1285 GFEDVPNRLK NEKEPMVLKL KDWPPGEDFR DMMPSRFDDL MANIPLPEYT BACU005895/1-1322 GFEDVPNRLK NEKEPMVLKL KDWPPGEDFR DMMPSRFDDL MANIPLPEYT 1101 1150 ENSTTRP00000009851/1-1260 RRDGKLNLAS RLPNYFVRPD LGPKMYNAYG LITPEDRKYG TTNLHLDVSD ENSP00000386660/1-1321 RRDGKLNLAS RLPNYFVRPD LGPKMYNAYG LITPEDRKYG TTNLHLDVSD ENSBTAP00000018069/1-1320 RRDGKLNLAS RLPNYFVRPD LGPKMYNAYG LITPEDRKYG TTNLHLDVSD bmy_20088T0/1-1285 RRDGKLNLAS RLPNYFVRPD LGPKMYNAYG LITPEDRKYG TTNLHLDVSD BACU005895/1-1322 RRDGKLNLAS RLPNYFVRPD LGPKMYNAYG LITPEDRKYG TTNLHLDVSD 1151 1200 ENSTTRP00000009851/1-1260 AANVMVYVGI PKGQCDQEEE VLKTIQDGDS DELTIKRFIE GKEKPGALWH ENSP00000386660/1-1321 AANVMVYVGI PKGQCEQEEE VLKTIQDGDS DELTIKRFIE GKEKPGALWH ENSBTAP00000018069/1-1320 AANVMVYVGI PKGQCDQEEE VLKTIQDGDS DELTIKRFIE GKEKPGALWH bmy_20088T0/1-1285 AANVMVYVGI PKGQCDQEEE VLKTIQDGDS DELTIKRFIE GKEKPGALWH BACU005895/1-1322 AANVMVYVGI PKGQCDQEEE VLKTIQDGDS DELTIKRFIE GKEKPGALWH 1201 1250 ENSTTRP00000009851/1-1260 IYAAKDTEKI REFLKKVSEE QGQENPADHD PIHDQSWYLD RSLRKRLHQE ENSP00000386660/1-1321 IYAAKDTEKI REFLKKVSEE QGQENPADHD PIHDQSWYLD RSLRKRLHQE ENSBTAP00000018069/1-1320 IYAAKDTEKI REFLKKVSEE QGQENPADHD PIHDQSWYLD RSLRKRLHQE bmy_20088T0/1-1285 IYAAKDTEKI REFLKK---- ---------- ---------- ---------- BACU005895/1-1322 IYAAKDTEKI REFLKKVSEE QGQENPADHD PIHDQSWYLD RSLRKRLHQE 1251 1300 ENSTTRP00000009851/1-1260 YGVQGWAIVQ FLGDVVFIPA GAPHQVHNLY SCIKVAEDFV SPEHVKHCFW ENSP00000386660/1-1321 YGVQGWAIVQ FLGDVVFIPA GAPHQVHNLY SCIKVAEDFV SPEHVKHCFW ENSBTAP00000018069/1-1320 YGVQGWAIVQ FLGDVVFIPA GAPHQVHNLY SCIKVAEDFV SPEHVKHCFW bmy_20088T0/1-1285 ---------- ---------- -----VHNLY SCIKVAEDFV SPEHVKHCFW BACU005895/1-1322 YGVQGWAIVQ FLGDVVFIPA GAPHQVHNLY SCIKVAEDFV SPEHVKHCFW 1301 1350 ENSTTRP00000009851/1-1260 LTQEFRYLSQ THTNHEDKLQ VKNVIYHAVK DAVAMLKASE SGFGKP ENSP00000386660/1-1321 LTQEFRYLSQ THTNHEDKLQ VKNVIYHAVK DAVAMLKASE SSFGKP ENSBTAP00000018069/1-1320 LTQEFRYLSQ THTNHEDKLQ VKNVIYHAVK DAVAMLKASE SSFGKP bmy_20088T0/1-1285 LTQEFRYLSQ THTNHEDKLQ VKNVIYHAVK DAVAMLKASE SSFGKP BACU005895/1-1322 LTQEFRYLSQ THTNHEDKLQ VKNVIYHAVK DAVAMLKASE SSSGKP