KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:03:35 2014 Check: 00 .. Name: ENSTTRP00000004334/1-255 Len: 255 Check: 7400 Weight: 1.00 Name: ENSBTAP00000018076/1-255 Len: 255 Check: 6296 Weight: 1.00 Name: bmy_21723T0/1-213 Len: 255 Check: 5072 Weight: 1.00 Name: ENSP00000254193/1-255 Len: 255 Check: 6896 Weight: 1.00 // 1 50 ENSTTRP00000004334/1-255 MVKLTAELIE QAAQYTNAVR DRELDLRXXX XXXXXXXXXX XXXXXXIDFS ENSBTAP00000018076/1-255 MVKLTAELIE QAAQYTNAVR DRELDLRGYK IPVIENLGAT LDQFDAIDFS bmy_21723T0/1-213 MVKLTAELIE QAAQYTNAVR DRELDLRGYK IPVIENLGAT LDQFDAIDFS ENSP00000254193/1-255 MVKLTAELIE QAAQYTNAVR DRELDLRGYK IPVIENLGAT LDQFDAIDFS 51 100 ENSTTRP00000004334/1-255 DNEIRKLDGF PLLRRLKTLL VNNNRICRIG EGLDQALPCL TELILTNNSL ENSBTAP00000018076/1-255 DNEIRKLDGF PLLRRLKTLL VNNNRICRIG EGLDQALPCL TELILTNNSL bmy_21723T0/1-213 DNEIRKLDGF PLLRRLKTLL VNNNRIC--- ---------- ---------- ENSP00000254193/1-255 DNEIRKLDGF PLLRRLKTLL VNNNRICRIG EGLDQALPCL TELILTNNSL 101 150 ENSTTRP00000004334/1-255 VELGDLDPLA SLKSLTYLSI LRNPVTNKKH YRLYVIYKVP QVRVLDFQKV ENSBTAP00000018076/1-255 VELGDLDPLA SLKSLTYLSI LRNPVTNKKH YRLYVIYKVP QVRVLDFQKV bmy_21723T0/1-213 ---------- ---------I LRNPVTNKKH YRLYVIYKVP QVRVLDFQKV ENSP00000254193/1-255 VELGDLDPLA SLKSLTYLSI LRNPVTNKKH YRLYVIYKVP QVRVLDFQKV 151 200 ENSTTRP00000004334/1-255 KLKERQEAEK NVKGKRGAQL AKDIARRSKT FNPGAGLPTD KKKGGPSPGD ENSBTAP00000018076/1-255 KLKERQEAEK MFKGKRGAQL AKDIARRSKT FNPGAGLPTD KKKGGPSPGD bmy_21723T0/1-213 KLKERQEAEK MFKGKRGAQL AKDIARRSKT FNPGAGLPTD KKKGGPSPGD ENSP00000254193/1-255 KLKERQEAEK MFKGKRGAQL AKDIARRSKT FNPGAGLPTD KKKGGPSPGD 201 250 ENSTTRP00000004334/1-255 VEAIKNAIAN ASTLAEVERL KGLLQSGQIP GRERRSGPTD DGEEEMEEDT ENSBTAP00000018076/1-255 VEAIKNAIAN ASTLAEVERL KGLLQSGQIP GRERRAGPTD DGEEEMEEDT bmy_21723T0/1-213 VEAIKNAIAN ASTLAEVERL KGLLQSGQIP GRERRSGPTD DGEEEMEEDT ENSP00000254193/1-255 VEAIKNAIAN ASTLAEVERL KGLLQSGQIP GRERRSGPTD DGEEEMEEDT 251 300 ENSTTRP00000004334/1-255 VTNGS ENSBTAP00000018076/1-255 VANGS bmy_21723T0/1-213 VTNGS ENSP00000254193/1-255 VTNGS