KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:35 2014 Check: 00 .. Name: ENSP00000447149/1-486 Len: 486 Check: 6114 Weight: 1.00 Name: ENSBTAP00000018079/1-482 Len: 486 Check: 7697 Weight: 1.00 Name: ENSTTRP00000015517/1-486 Len: 486 Check: 5960 Weight: 1.00 Name: bmy_16466T0/1-283 Len: 486 Check: 798 Weight: 1.00 Name: BACU000936/1-486 Len: 486 Check: 6306 Weight: 1.00 // 1 50 ENSP00000447149/1-486 MVMQFQGLEN PIQISPHCSC TPSGFFMEMM SMKPAKGVLT EQVAGPLGQN ENSBTAP00000018079/1-482 MVMQFQELEN PVQISPCHSH TSSGFAMEVM SMKPAKGVLT EQVAGPLGQN ENSTTRP00000015517/1-486 MVMQFPELEN PGQISPCHSC TSLGFAMEMM SMKPAKGVLT EQAAGPLGQN bmy_16466T0/1-283 ---------- ---------- ---------- ---------- ---------- BACU000936/1-486 MVMQFPELEN PGQISPCHSC TSLGFAMEIM SMKPAKGVLT EQAAGPLGQN 51 100 ENSP00000447149/1-486 LEVEPYSQYS NVQFPQVQPQ ISSSSYYSNL GFYPQQPEEW YSPGIYELRR ENSBTAP00000018079/1-482 LEVEPYSQYN NVQFPQVQPQ ISSSSYYSNV GFYPQQPEEW YSPGIYELRR ENSTTRP00000015517/1-486 LEVEPYSQYN NIQFPQVQPQ ISSSSYYSNL GFYPQQPEEW YSPGIYELRR bmy_16466T0/1-283 ---------- ---------- ---------- ---------- ---------- BACU000936/1-486 LEVEPYSQYN NIQFPQVQPQ ISSSSYYSNL GFYPQQPEEW YSPGIYELRR 101 150 ENSP00000447149/1-486 MPAETLYQGE TEVAEMPVTK KPRMGASAGR IKGDELCVVC GDRASGYHYN ENSBTAP00000018079/1-482 MPAETLYQGE TEVVEIPITK KARLGASAGR IKGDELCVVC GDRASGYHYN ENSTTRP00000015517/1-486 MPAETLYQGE TEVVEIPVTK KARLGASAGR IKGDELCVVC GDRASGYHYN bmy_16466T0/1-283 ---------- ---------- ---------- ---------- ---------- BACU000936/1-486 MPAETLYQGE TEVVEIPVTK KPRLGASAGR IKGDELCVVC GDRASGYHYN 151 200 ENSP00000447149/1-486 ALTCEGCKGF FRRSITKNAV YKCKNGGNCV MDMYMRRKCQ ECRLRKCKEM ENSBTAP00000018079/1-482 ALTCEGCKGF FRRSITKNAV YKCKNGGNCV MDMYMRRKCQ ECRLRKCKEM ENSTTRP00000015517/1-486 ALTCEGCKGF FRRSITKNAV YKCKNGGNCV MDMYMRRKCQ ECRLRKCKEM bmy_16466T0/1-283 ---------- ---------- ---------- MDMYMRRKCQ ECRLRKCKEM BACU000936/1-486 ALTCEGCKGF FRRSITKNAV YKCKNGGNCV MDMYMRRKCQ ECRLRKCKEM 201 250 ENSP00000447149/1-486 GMLAECMYTG LLTEIQCKSK RLRKNVKQHA DQTVNEDSEG RDLRQVTSTT ENSBTAP00000018079/1-482 GMLAEC---- LLTEIQCKSK RLRKNVKQHA DQAIHEDSEG RDLRQVTSTT ENSTTRP00000015517/1-486 GMLAECMYTG LLTDIQCKSK RLRKNVKQHA DQTINEDGEG RDLRQVTSTT bmy_16466T0/1-283 GMLAEC---- LLTDIQCKSK RLRKNVKQHA DQTINEDSEG RDLRQVTSTT BACU000936/1-486 GMLAECMYTG LLTDIQCKSK RLRKNVKQHA DQTINEDSEG RDLRQVTSTT 251 300 ENSP00000447149/1-486 KSCREKTELT PDQQTLLHFI MDSYNKQRMP QEITNKILKE EFSAEENFLI ENSBTAP00000018079/1-482 KSCREKTELT PDQQNLLHYI MDSYSKQRMP QEITNKFLKE EFSAEENFII ENSTTRP00000015517/1-486 KSCREKTELT PDQQNLLHYI MDSYSKQRMP QEITNKILKE EFSAEENFLI bmy_16466T0/1-283 KSCREKTELT PDQQNLLHYI MDSYSKQRMP QEITNKILKE EFSAEENFLI BACU000936/1-486 KSCREKTELT PDQQTLLHYI MDSYSKQRMP QEITNKILKE EFSAEENFLI 301 350 ENSP00000447149/1-486 LTEMATNHVQ VLVEFTKKLP GFQTLDHEDQ IALLKGSAVE AMFLRSAEIF ENSBTAP00000018079/1-482 LTEMATSHVQ VLVEFTKKLP GFQTLDHEDQ IALLKGSAVE AMFLRSAEIF ENSTTRP00000015517/1-486 LTEMATSHVQ ILVEFTKKLP GFQTLDHEDQ IALLKGSAVE AMFLRSAEIF bmy_16466T0/1-283 LTEMATSHVQ ILVEFTKKLP GFQTLDHEDQ IALLKGSAVE AMFLRSAEIF BACU000936/1-486 LTEMATSHVQ ILVEFTKKLP GFQTLDHEDQ IALLKGSAVE AMFLRSAEIF 351 400 ENSP00000447149/1-486 NKKLPSGHSD LLEERIRNSG ISDEYITPMF SFYKSIGELK MTQEEYALLT ENSBTAP00000018079/1-482 SKKLPAGHTD LLEERIRKSG ISDEYITPMF SFYKSVAELK MTQEEYALLT ENSTTRP00000015517/1-486 SKKLPAGHAD LLEERIRKSG ISDEYITPMF SFYKSVAELK MTQEEYALLT bmy_16466T0/1-283 S--------- ---------- ISDEYITPMF SFYKSVAELK MTQEEYALLT BACU000936/1-486 SKKLPAGHAD LLEERIRKSG ISDEYITPMF SFYKSVAELK MTQEEYALLT 401 450 ENSP00000447149/1-486 AIVILSPDRQ YIKDREAVEK LQEPLLDVLQ KLCKIHQPEN PQHFACLLGR ENSBTAP00000018079/1-482 AIVILSPDRQ YIKDREAVEK LQEPLLDVLQ KLCKIHQPEN PQHFACLLGR ENSTTRP00000015517/1-486 AIVILSPDRQ YIKDREAVEK LQEPLLDVLQ KLCKIHQPEN PQHFACLLGR bmy_16466T0/1-283 AIVILSPDRQ YIKDREAVEK LQEPLLDVLQ KLCKIHQPEN PQHFACLLGR BACU000936/1-486 AIVILSPDRQ YIKDREAVEK LQEPLLDVLQ KLCKIHQPEN PQHFACLLGR 451 500 ENSP00000447149/1-486 LTELRTFNHH HAEMLMSWRV NDHKFTPLLC EIWDVQ ENSBTAP00000018079/1-482 LTELRTFNHH HADMLMSWRV NDHKFTPLLC EIWDVQ ENSTTRP00000015517/1-486 LTELRTFNHH HAEMLMSWRV NDHKFTPLLC EIWDVQ bmy_16466T0/1-283 LTELRTFNHH HAEMLMSWRV NDHKFTPLLC EIWDVQ BACU000936/1-486 LTELRTFNHH HAEMLMSWRV NDHKFTPLLC EIWDVQ