KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:03:40 2014 Check: 00 .. Name: bmy_10867T0/1-131 Len: 208 Check: 7972 Weight: 1.00 Name: ENSP00000311127/1-207 Len: 208 Check: 1679 Weight: 1.00 Name: ENSBTAP00000018089/1-188 Len: 208 Check: 2206 Weight: 1.00 Name: ENSTTRP00000009735/1-172 Len: 208 Check: 4749 Weight: 1.00 // 1 50 bmy_10867T0/1-131 ---------- ---------- ---------- ---------- ---------- ENSP00000311127/1-207 MSPLLRRLLL AALLQLAPAQ APVSQPDAPG HQRKVVSWID VYTRATCQPR ENSBTAP00000018089/1-188 ---------- ---------Q APVSQPDAPG HQKKVVSWID VYARATCQPR ENSTTRP00000009735/1-172 ---------- ---------- ---------- -----VSWID VYARATCQPR 51 100 bmy_10867T0/1-131 -------MEL MGTVAKQLVP SCVTVQRCGG CCPDDGLECV PTGQHQVRMQ ENSP00000311127/1-207 EVVVPLTVEL MGTVAKQLVP SCVTVQRCGG CCPDDGLECV PTGQHQVRMQ ENSBTAP00000018089/1-188 EVVVPLNMEL MGTVAKQLVP SCVTVQRCGG CCPDDGLECV PTGQHQVRMQ ENSTTRP00000009735/1-172 EVVVPLTMEL MGTVAKQLVP SCVTVQRCGG CCPDDGLECV PTGQHQVRMQ 101 150 bmy_10867T0/1-131 ILMIRYPSSQ LGEMSLEEHS QCECRPKKPE SAVKLD---- ---------- ENSP00000311127/1-207 ILMIRYPSSQ LGEMSLEEHS QCECRPKKKD SAVKPDRAAT PHHRPQPRSV ENSBTAP00000018089/1-188 ILMIQYPSSQ LGEMSLEEHS QCECRPKKRE SAVKPDRAST PHHRPQPRSV ENSTTRP00000009735/1-172 ILMIRYPSSQ LGEMSLEEHS QCECRPKKRE SAVKLDRAST PHHRPQPRSV 151 200 bmy_10867T0/1-131 ---SPRPLCP RCPQRRQRPD P---RTCHCR CRRRSFLRCQ GRGLELNPDT ENSP00000311127/1-207 PGWDSAPGAP -SPADITHPT PAPGPSAHAA PSTTSALTPG PAAAAADAAA ENSBTAP00000018089/1-188 PGWDPAPGAP -SPADITHPT PAPGPSAHAA PSAASALTPG PATAAADAAA ENSTTRP00000009735/1-172 PGWDPAPGAP -SPADITHPT PAPGPSAHAA PSAASALTPG PAAAAADAAA 201 250 bmy_10867T0/1-131 CRCRKLRR ENSP00000311127/1-207 SSVAKGGA ENSBTAP00000018089/1-188 SSVVKGGA ENSTTRP00000009735/1-172 SSVVKGGA