KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:41 2014 Check: 00 .. Name: bmy_14899T0/1-363 Len: 456 Check: 3395 Weight: 1.00 Name: ENSP00000019103/1-440 Len: 456 Check: 7954 Weight: 1.00 Name: ENSBTAP00000018103/1-434 Len: 456 Check: 3504 Weight: 1.00 Name: BACU014751/1-348 Len: 456 Check: 587 Weight: 1.00 Name: ENSTTRP00000006930/1-428 Len: 456 Check: 9125 Weight: 1.00 // 1 50 bmy_14899T0/1-363 MRALLPLPL- ------LLAC AAHAVGALPR LCTVLQVLRE ERDQCLQGLA ENSP00000019103/1-440 MRPHLSPPLQ QLLLPVLLAC AAHSTGALPR LCDVLQVLWE EQDQCLQELS ENSBTAP00000018103/1-434 MRPRL-PPLP GLL---LLAC AVHAVGTPPR LCDVLRVLRV ERDQCLQELS BACU014751/1-348 ---------- ---------- ---------- ---------- MRSESVR--- ENSTTRP00000006930/1-428 MRALLPPLL- ------LLAC AAHAVGALPR LCAVLQVLRE ERDQCLQGLA 51 100 bmy_14899T0/1-363 EER-----AR HPAPG----- ---------- ---------- ---------- ENSP00000019103/1-440 REQTGDLGTE QPVPGCEGMW DNISCWPSSV PGRMVEVECP RFLRMLTSRN ENSBTAP00000018103/1-434 RES-----VE HPAPGCRGLW DNTSCWPSSA LGQTVEVACP RFLWMLVGRN BACU014751/1-348 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006930/1-428 EGP------- GPAPGCQGLW DNTSCWPSSA LGQTVEVACP RFLWMLVGRN 101 150 bmy_14899T0/1-363 -SIFRNCTQG GWSETFPRPD LACGVHVNDS SNEKRYEYLL KLKVMYTVGY ENSP00000019103/1-440 GSLFRNCTQD GWSETFPRPN LACGVNVNDS SNEKRHSYLL KLKVMYTVGY ENSBTAP00000018103/1-434 GSMFRNCTQG GWSETFPRPD LACGVNVNDS SNEKRYEYLL KLKIMYTVGY BACU014751/1-348 -SIFRNCTQG GWSETFPRPD LACGVHVNDS SNEKRYEYLL KLKVMYTVGY ENSTTRP00000006930/1-428 GSIFRNCTQG GWSETFPRPD LACGVHVNDS SNEKRYEYLL KLKVMYTVGY 151 200 bmy_14899T0/1-363 SSSLVMLLLA LSILCAFRKL HCTRNYIHMH LFVSFILRAL SNFIKDAVLF ENSP00000019103/1-440 SSSLVMLLVA LGILCAFRRL HCTRNYIHMH LFVSFILRAL SNFIKDAVLF ENSBTAP00000018103/1-434 SSSLVMLLVA LSILCAFRRL HCTRNYIHMH LFVSFILRAL SNFIKDAVLF BACU014751/1-348 SSSLVMLLVA LSVLCAFRKL HCTRNYIHMH LFVSFILRAL SNFIKDAVLF ENSTTRP00000006930/1-428 SSSLVMLLVA LGILCAFRKL HCTRNYIHMH LFVSFILRAL SNFIKDAVLF 201 250 bmy_14899T0/1-363 SDDDVAHCDA HRV------- --------PQ PFLLLRGL-- ---------- ENSP00000019103/1-440 SSDDVTYCDA HRAGCKLVMV LFQYCIMANY SWLLVEGLYL HTLLAISFFS ENSBTAP00000018103/1-434 SSDDATHCDA HRVGCKLVMV FFQYCIMANY SWLLVEGLYL HTLLVISFFS BACU014751/1-348 SDDDVAHCDA HRVGCKLVMV FFQYCIMANY SWLLVEGLYL HTLLVISFFS ENSTTRP00000006930/1-428 SSDDVARCDA HRVGCKLVMV FFQYCIMANY SWLLVEGLYL HTLLVISFFS 251 300 bmy_14899T0/1-363 ---------- ----SPDTF- --WKMLGKLV DGGRCWDINA NASIWWVIRG ENSP00000019103/1-440 ERKYLQGFVA FGWGSPAIFV ALWAIARHFL EDVGCWDINA NASIWWIIRG ENSBTAP00000018103/1-434 ERKWLQGFVA LGWGSPAIFV ASWAVTRHFL EDVGCWDINA NASIWWVIRG BACU014751/1-348 ERKWLQGFIA LGWGSPAIFV ALWAVTRHFL EDVGCWDINA NASIWWVIRG ENSTTRP00000006930/1-428 ERKWLQGFIA LGWGSPAIFV ASWAVTRHFL EDVGCWDINA NASIWWVIRG 301 350 bmy_14899T0/1-363 PVIVSVLRPL AEPVGLDKNK KDTWGGGAHW GSPSPEVMCT VSEECQGCRA ENSP00000019103/1-440 PVILSILINF ILFINILR-- ---------- -ILMRKLRTQ ETRGNEVSHY ENSBTAP00000018103/1-434 PVILSILINF ILFINILR-- ---------- -ILMRKLRTQ ETRGNEVNHY BACU014751/1-348 PVIVSVLINF ILFINILR-- ---------- -ILMRKLRTQ ETRGSEGNHY ENSTTRP00000006930/1-428 PVIVSVLINF ILFINILR-- ---------- -ILMRKLRTQ ETRGSEGNHY 351 400 bmy_14899T0/1-363 RRLAKSTLLL VPLFGVHYIV FAFSPEDAME MQLFFELALG SFQGLVVAVL ENSP00000019103/1-440 KRLARSTLLL IPLFGIHYIV FAFSPEDAME IQLFFELALG SFQGLVVAVL ENSBTAP00000018103/1-434 KRLAKSTLLL IPLFGIHYII FAFSPEDAME IQLFFELALG SFQGLVVAVL BACU014751/1-348 TRLAKSTLLL VPLFGVHYIV FAFSPEDAME MQLFFELALG SFQGLVVAVL ENSTTRP00000006930/1-428 KRLAKSTLLL VPLFGVHYII FAFSPEDAME MQLFFELALG SFQGLVVAVL 401 450 bmy_14899T0/1-363 YCFLNGEVQL EVQKKWRQWH LRECPLHPAA LGS-FSSGTK ASPSAQSRGA ENSP00000019103/1-440 YCFLNGEVQL EVQKKWQQWH LREFPLHPVA S---FSNSTK ASHLEQSQGT ENSBTAP00000018103/1-434 YCFLNGEVQL EVQKKWRQWH LRELPLRPVA PSSSFSNGIK ASTSEQSRAT BACU014751/1-348 YCFLNGEVQL EVQKKWRQWH LREFPLHPVA LGS-FSSGTK ASPSEQSRGT ENSTTRP00000006930/1-428 YCFLNGEVQL EVQKKWRQWH LRELPLHPVA LGS-FSSGTK ASPSEQSRGT 451 500 bmy_14899T0/1-363 CRTSVI ENSP00000019103/1-440 CRTSII ENSBTAP00000018103/1-434 HRTSVI BACU014751/1-348 CRTSVI ENSTTRP00000006930/1-428 CRTSVI