KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:46 2014 Check: 00 .. Name: ENSP00000358081/1-575 Len: 629 Check: 1043 Weight: 1.00 Name: ENSBTAP00000018131/1-585 Len: 629 Check: 3306 Weight: 1.00 Name: ENSTTRP00000016046/1-576 Len: 629 Check: 3867 Weight: 1.00 Name: bmy_02829T0/1-611 Len: 629 Check: 9016 Weight: 1.00 Name: BACU004707/1-573 Len: 629 Check: 9636 Weight: 1.00 // 1 50 ENSP00000358081/1-575 MSAATHSPMM QVASGN--GD RDPLPPGWEI KIDPQTGWPF FVDHNSRTTT ENSBTAP00000018131/1-585 MSAATHSPMV QMASGNGAGD RDPLPPGWEI KIDPQTGWPF FVDHNNRTTT ENSTTRP00000016046/1-576 MSAATHSPMV QMASGSGAGD RDPLPPGWEI KIDPQTGWPF FVDHNSRTTT bmy_02829T0/1-611 MSAATHSPMV QMASGSGAGD RDPLPPGWEI KIDPQTGWPF FVDHNSRTTT BACU004707/1-573 MSAATHSPMV QMASGSGAGD RDPLPPGWEI KIDPQTGWPF FVDHNSRTTT 51 100 ENSP00000358081/1-575 WNDPRVPSEG PK-------- ---------- ---------- ---------- ENSBTAP00000018131/1-585 WNDPRVPPEG PK-------- ---------- ---------- ---------- ENSTTRP00000016046/1-576 WNDPRVPPEV PK-------- ---------- ---------- ---------- bmy_02829T0/1-611 WNDPRVPPEV PKLVLKIFLR RQPPRCRPFS ADFQAVACVG LQHESVSLGD BACU004707/1-573 WNDPRVPPEV PK-------- ---------- ---------- ---------- 101 150 ENSP00000358081/1-575 ETPSSANGPS REGSRLPPAR EGHPVYPQLR PGYIPIPVLH EGAENRQVHP ENSBTAP00000018131/1-585 ETASSANGPS REGARLLPTR EGHAVYPQLR PGYIPIPVLH EGAPSR-PHP ENSTTRP00000016046/1-576 ETASSANGPS REGSRPLPTR EGHVVYPRLR PGYIPIPVLH DGAQSRQPHP bmy_02829T0/1-611 ETASSANGPS REGSRPLPTR EGHAVYPRLR PGYIPIPVLH EGAQSRQPHP BACU004707/1-573 ETASSANGPS REGSRPLPIR EGHAVYPRLR PGYIPIPVLH DGAQSRQLHP 151 200 ENSP00000358081/1-575 FHVYPQPGMQ RFRTEAAAAA PQRSQSPLRG MPETTQPDKQ CGQ-VAAAAA ENSBTAP00000018131/1-585 VFAYSQPGTQ RFQTEAAAAA PPRSQSPLRG VAEASQPDKP SAPAAAAAAA ENSTTRP00000016046/1-576 VFAYPQPGTQ RFQTEVAPAA PQRPQSPLRG VAEATQPDKQ CGQ-AVAAAA bmy_02829T0/1-611 VFAYPQPGTQ RFQTEVAPAA PQRPRSPLRG VAEAAQPDKQ CGQ-----AV BACU004707/1-573 VFAYPQPGTQ RFQTEVAPAA PQRPQSPLRG VAEAAQPDKQ CGQ-----AA 201 250 ENSP00000358081/1-575 AQPPASHGPE RSQSPAASDC SSSSSSASLP -SSGRSSLGS HQLPRGYISI ENSBTAP00000018131/1-585 AQPPASHGPE RSQSPAASDC SSSSSSASLP ASTGRSSLGG YQLPRGYISI ENSTTRP00000016046/1-576 AQPPASHG-E RSQSPAASDC SSSSSSASLP SSSGRSSLGS HQLPRGYISI bmy_02829T0/1-611 AQPPAAHGPE RSQSPAASDC SSSSSSASLP SSSGRSSLGS HQLPRGYISI BACU004707/1-573 AQPPAAHGPE RSQSPAASDC SSSSSSASLP SSSGRSSLGS HQLPRGYISI 251 300 ENSP00000358081/1-575 PVIHEQNVTR PAAQPSFHQA QKTHYPAQQG EYQTHQPVYH KIQGDDWEPR ENSBTAP00000018131/1-585 PVIHEQNVTR PAAQPSFHQA QKTHYPAQQG EYQTHQPVYH KIQGDDWEPR ENSTTRP00000016046/1-576 PVIHEQNVTR PAAQPSFHQA QKTHYPAQQG EYQTHQPVYH KIQGDDWEPR bmy_02829T0/1-611 PVIHEQNVTR PAAQPSFHQA QKTHYPAQQG EYQTHQPVYH KIQGDDWEPR BACU004707/1-573 PVIHEQNVPR PAAQPSFHHA QKTHYPAQQG EYQTHQPVYH KIQGDDREPR 301 350 ENSP00000358081/1-575 PLRAASPFRS SVQGASSREG SPARSSTPLH SPSPIRVHTV VDRPQQPMTH ENSBTAP00000018131/1-585 TTWTASPFRP PVRSASSREG SPARSSTPVP PPPSVRVQTT VDRPQ-PMTH ENSTTRP00000016046/1-576 TVWAASPFRS PVRGASSREG SPARSSTPVH TPPSVRVQTV VDRPQXXXXX bmy_02829T0/1-611 TMWAASPFRS PVRSASSREG SPARSSTPVH SPPSLRVQTV VDRPQQPMTH BACU004707/1-573 TMWAASPFRS PVRGASSREG SPARSSTPVH SPPSLRVQTV VDRPQQPMTH 351 400 ENSP00000358081/1-575 RETAPVSQPE NKPESKPGPV GPELPPGHIP IQVIRKEVDS KPVSQKPPPP ENSBTAP00000018131/1-585 REPSPVPQPE NKPESRPGPT GPDLPPGHIP IQVIRKEVDA QPVSQKPPPP ENSTTRP00000016046/1-576 XXXXXXXXXX XXPESKPGPA GPDLTPGHIP IQVIRKEVDS QPVSQKPLPP bmy_02829T0/1-611 REPSPIPQPE NKPESKPGPA GPDLPPGHIP IQVIRKEVDS QPVSQKPPPP BACU004707/1-573 REPSPIPQPE NKPESKPGPA GPDLLPGHIP IQVIRKEVDS QPVSQKPPPP 401 450 ENSP00000358081/1-575 SEKVEVKVPP APVPCPPPSP G--------- ---PSAVPSS PKSVATEERA ENSBTAP00000018131/1-585 SEKVEIKVPS APVPC-PPSP APPTVPSAVP SAVPSAVPSS PKNVAAEERA ENSTTRP00000016046/1-576 SEKVEVKVPS APVPC-PPSP A--------- ---PSAVPSP AKNVAAEERA bmy_02829T0/1-611 SEKVEVKVPS TPVPC-PPSP A--------- ---PSAIPSA PKNVAAEERA BACU004707/1-573 SEKVEVKVPS TPVPC-PPSP A--------- ---PSAIPSA PKNVAAEERA 451 500 ENSP00000358081/1-575 APSTAPAEAT PPKPGEAEAP PKHPGVLKVE AILEKVQGLE QAVDNFEGKK ENSBTAP00000018131/1-585 APSPAPAEAA PPKPGEAEVP PKHPGVLKVE AILEKVQGLE QAVDNFEGKK ENSTTRP00000016046/1-576 APSPAPAEAT PPKPGEAEVP PKHPGVLKVE AILEKVQGLE QAVDNFEGKK bmy_02829T0/1-611 APSPVPAEAT TPKPGEAEVP PKHPGVLKIE TILEKVQGLE QAVDNFEGKK BACU004707/1-573 APSPVPAEAT TPKPGEAEEP PKHPGVLKIE TILEKVQGLE QAVDNFEGKK 501 550 ENSP00000358081/1-575 TDKKYLMIEE YLTKELLALD SVDPEGRADV RQARRDGVRK VQTILEKLEQ ENSBTAP00000018131/1-585 TDKKYLMIEE YLTKELLALD SVDPEGRADV RQARRDGVRK VQTILEKLEQ ENSTTRP00000016046/1-576 TDKKYLMIEE YLTKELLALD SVDPEGRADV RQARRDGVRK VQTILEKLEQ bmy_02829T0/1-611 TDKKYLMIEE YLTKELLALD SVDPEGRADV RQTRRDGVRK VQTILEKLEQ BACU004707/1-573 TDKKYLMIEE YLTKELLALD SVDPEGRADV RQTRRDGVRK VQTILEKLEQ 551 600 ENSP00000358081/1-575 KAIDVPGQVQ VYELQPSNLE ADQPLQAIME MGAVAADKGK KNAGNAEDPH ENSBTAP00000018131/1-585 KAIDVPGQVQ VYELQPSSLE TDQPLQEIME M---AADKSK KSAGDGEDPK ENSTTRP00000016046/1-576 KAIDVPGQVQ VYELQPSSLD TDQPLQEIME MGVVTADKSK KSAGNGEDPS bmy_02829T0/1-611 KAIDVPGQVQ VYELQPSSLE TDQPLQEIME MGAVTADKSK KSAGNGEDPS BACU004707/1-573 KAIDVPGQVQ VYELQPSSLE TDQPLQEIME MGAVTADKSK KSAGNGEDPN 601 650 ENSP00000358081/1-575 TETQQPEATA AATSNPSSMT DTPGNPAAP ENSBTAP00000018131/1-585 TETQPPEAKA AATPNPSSTT DTTANPAAP ENSTTRP00000016046/1-576 TETQQPEAKA AAAPNPSSTT DTAANPAAP bmy_02829T0/1-611 TETQQPEAKE AATPNPSSTT DTAANPAAP BACU004707/1-573 TETQQPEAKE AATPNPSSTT DTAANPAAP