KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:46 2014 Check: 00 .. Name: ENSTTRP00000014672/1-356 Len: 408 Check: 8637 Weight: 1.00 Name: bmy_02912T0/1-278 Len: 408 Check: 844 Weight: 1.00 Name: ENSP00000326170/1-363 Len: 408 Check: 5260 Weight: 1.00 Name: BACU013952/1-327 Len: 408 Check: 1139 Weight: 1.00 Name: ENSBTAP00000018136/1-370 Len: 408 Check: 3851 Weight: 1.00 // 1 50 ENSTTRP00000014672/1-356 ---------- ----MWATCC NWFCLDGQPE EAPPPQGART QAYSNPGYSS bmy_02912T0/1-278 ---------- ----MWATCC NWFCLDGQPE EAPPPQGART QAYSNPGYSS ENSP00000326170/1-363 ---------- ----MWATCC NWFCLDGQPE EVPPPQGARM QAYSNPGYSS BACU013952/1-327 ---------- ----MWATCC NWFCLDGQPE EAPPPQGART QAYSNPGYSS ENSBTAP00000018136/1-370 PSSPCLWRQA SDLIMWATCC NWFCLDGQPE EASPPQGART QAYSNPGYSS 51 100 ENSTTRP00000014672/1-356 FPSPTGSEPN CKACGAHFAS MTRK------ ---------- ---------- bmy_02912T0/1-278 FPSPTGSEPN CKACGAHFAS MARKMGEVSP SSHRTVLFSL SDVVSSASCS ENSP00000326170/1-363 FPSPTGLEPS CKSCGAHFAN TARK------ ---------- ---------- BACU013952/1-327 FPSPTGSEPN CKACGAHFAS MARK------ ---------- ---------- ENSBTAP00000018136/1-370 FPSPTGSEPS CKACGTHFAS MARK------ ---------- ---------- 101 150 ENSTTRP00000014672/1-356 --QTCLDCKK NFCVACSSQV GSGPRLCLLC QRFRATAFQR EELMKMKVKD bmy_02912T0/1-278 KQQTCLDCKK NFCVACSSQV GSGPRLCLLC QRFRATAFQR EELMKMKVKD ENSP00000326170/1-363 --QTCLDCKK NFCMTCSSQV GNGPRLCLLC QRFRATAFQR EELMKMKVKD BACU013952/1-327 ---------- ---------- ---------- -RFRATAFQR EELMKMKVKD ENSBTAP00000018136/1-370 --QTCLDCKK NFCTSCSSQV GAGPRLCLLC QRFRATDFRR EELMKMKVKD 151 200 ENSTTRP00000014672/1-356 LRDYLSLHDI STDMCREKEE LVFLVLGQQP VISQEGRTHA PSLSPDSPEQ bmy_02912T0/1-278 LRDYLSLHDI STETCREKEE LVFLVLGQQP VISQEGRTHA PSLSPDSPEQ ENSP00000326170/1-363 LRDYLSLHDI STEMCREKEE LVLLVLGQQP VISQEDRTRA STLSPDFPEQ BACU013952/1-327 LRDYLSLHDI STETCREKEE LVFLVLGQQP VISQEGRTRA PSLSPDSPEQ ENSBTAP00000018136/1-370 LRDYLSLHDI STDMCREKEE LVSLVLGQQP VISQEGRTQA PHLGPDFPEQ 201 250 ENSTTRP00000014672/1-356 QAFLTQPHTS TIPPTSPGLP SS-------P PAQARDRQQA NGHVSQDKEE bmy_02912T0/1-278 QAFLTQPHTS TVPPTSPGLP SS-------A PAQARDRQQV R--------- ENSP00000326170/1-363 QAFLTQPHSS MVPPTSPNLP SSSAQATSVP PAQVQENQQA NGHVSQDQEE BACU013952/1-327 QAFLTQPHTS TVPPTSPGLP SS-------A PAQARDRQQA NGHVSQDQEE ENSBTAP00000018136/1-370 QAFLARPHTS TVPPTSPGLQ SA-------P PGQAQGRQQA NGHVSQDQEE 251 300 ENSTTRP00000014672/1-356 PVYLXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02912T0/1-278 ---------- PVGSHTVSAR ---------- ---------- ---------- ENSP00000326170/1-363 PVYLESVARV PAEDETQSID SEDSFVPGRR ASLSDLTDLE DIEGLTVRQL BACU013952/1-327 PVYLESTARA PAEDETQSVD SEDSFVPGRR ASLSDLTDLE DIEGLTVRQL ENSBTAP00000018136/1-370 PIYLERTARA PAEDETQSVD SEDSFVPGRR ASLSDLTDLE DIEGLTVRQL 301 350 ENSTTRP00000014672/1-356 XXXXXXXXXX XXXXXXXXXX XERVTRLYKD QKGLQHLACG AEDQNGGAVP bmy_02912T0/1-278 ---------- -------WR- ----ARF--- ---------- -------PLP ENSP00000326170/1-363 KEILARNFVN YKGCCEKWEL MERVTRLYKD QKGLQHLVSG AEDQNGGAVP BACU013952/1-327 KEILARNFVN YKGCCEKWEL MERVTRLYKD QKGLQHLVCG AEDQNGGPVP ENSBTAP00000018136/1-370 KEILARNFVN YKGCCEKWEL MERVTRLYKD QKGLQHLVCS AEDQNGGAVP 351 400 ENSTTRP00000014672/1-356 SSLEENLCRI CMD--SPIDC VLLECGHMVT CTKCGKRMNE CPICRQYVIR bmy_02912T0/1-278 PAPWERGKVK CLDYVTPF-C LLMRDDVFWT SDS------- ---------- ENSP00000326170/1-363 SGLEENLCKI CMD--SPIDC VLLECGHMVT CTKCGKRMNE CPICRQYVIR BACU013952/1-327 SSLEENLCRI CMD--SPIDC VLLECGHMVT CTKCGKRMNE CPICRQYVIR ENSBTAP00000018136/1-370 SSLEENLCRI CMD--SPIDC VLLECGHMVT CTKCGKRMNE CPICRQYVIR 401 450 ENSTTRP00000014672/1-356 AVHVFRS- bmy_02912T0/1-278 RVGFFQGY ENSP00000326170/1-363 AVHVFRS- BACU013952/1-327 AVHDFRS- ENSBTAP00000018136/1-370 AVHVFRS-