KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:47 2014 Check: 00 .. Name: ENSTTRP00000009254/1-376 Len: 412 Check: 9878 Weight: 1.00 Name: ENSBTAP00000018144/1-369 Len: 412 Check: 767 Weight: 1.00 Name: ENSP00000345575/1-409 Len: 412 Check: 7627 Weight: 1.00 Name: bmy_16737T0/1-376 Len: 412 Check: 7227 Weight: 1.00 Name: BACU001917/1-378 Len: 412 Check: 3690 Weight: 1.00 // 1 50 ENSTTRP00000009254/1-376 ---------- ---------- ---------- ----MESNKD EAERCISIAL ENSBTAP00000018144/1-369 ---------- ---------- ---------- ----MESNKD EAERCISIAL ENSP00000345575/1-409 MSSLRARLPA TRRRVAQPFA RPASPSLVPR SGSAMESNKD EAERCISIAL bmy_16737T0/1-376 ---------- ---------- ---------- ----MESNKD EAERCISIAL BACU001917/1-378 ---------- ---------- ---------- ----MESNKD EAERCISIAL 51 100 ENSTTRP00000009254/1-376 KAIQSNQPDR ALRFLEKAQR LYPTPRVRAL IESLNQKPQS ASDQPQPTEA ENSBTAP00000018144/1-369 KAIQSNQPDR ALRFLEKAQR LYPTPRVHAL IESLNQKPQP AGDQPQPTEA ENSP00000345575/1-409 KAIQSNQPDR ALRFLEKAQR LYPTPRVRAL IESLNQKPQT AGDQPPPTDT bmy_16737T0/1-376 KAIQSNQPDR ALRFLEKAQR LYPTLRVRAL IKSLNQKPQS AGDQPQPAEA BACU001917/1-378 KAIQSNQPDR ALRFLEKAQR LYPTPRVRAL IKSLNQKPQS AGDQPQPAEA 101 150 ENSTTRP00000009254/1-376 TQATHRKAGG AGTPSANGEA GGGESTKGYT AEQVAAVKRV KQCKDYYEIL ENSBTAP00000018144/1-369 THTTHRKAAG ANTASANGEA -GGESTKGYT AEQVAAVKRV KQCKDYYEIL ENSP00000345575/1-409 THATHRKAGG TDAPSANGEA -GGESTKGYT AEQVAAVKRV KQCKDYYEIL bmy_16737T0/1-376 TQATHRKAGA ASAPSANGEA GGGESTKGYT AEQVAAVKRV KQCKDYYEIL BACU001917/1-378 TQATHRKAGG AGAPSANGEA GGGESTKGYT AEQVAAVKRV KQCKDYYEIL 151 200 ENSTTRP00000009254/1-376 GVSRGXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXIG TAYAVLSNPE ENSBTAP00000018144/1-369 GVSRGASDED LKKAYRKLAL KFHPDKNHAP GATEAFKAIG TAYAVLSNPE ENSP00000345575/1-409 GVSRGASDED LKKAYRRLAL KFHPDKNHAP GATEAFKAIG TAYAVLSNPE bmy_16737T0/1-376 GVSRGASDED LKKAYRRLAL KFHPDKNRAP GATEAFKAIG TAYAVLSNPE BACU001917/1-378 GVSRGASDED LKKAYRRLAL KFHPDKNRAP GATEAFKAIG TAYAVLSNPE 201 250 ENSTTRP00000009254/1-376 KRKQYDQFGD DKSQAARHGH GHGDFHRGFE ADISPEDLFN MFFGGGFPSS ENSBTAP00000018144/1-369 KRKQYDQFGD DKGQAARHGH GHGDFHRGFE ADISPEDLFN MFFGGGFPSS ENSP00000345575/1-409 KRKQYDQFGD DKSQAARHGH GHGDFHRGFE ADISPEDLFN MFFGGGFPSS bmy_16737T0/1-376 KRKQYDQFGD DKNQAARHGH GHGDFHRGFE ADISPEDLFN MFFGGGFPSS BACU001917/1-378 KRKQYDQFGD DKNQAARHGH GHRDFHRGFE ADISPEDLFN MFFGGGFPSS 251 300 ENSTTRP00000009254/1-376 NVHVYSNGRM RYTYHQRQDR RENQGDGGLG VFVQLMPILI LILVSALSQL ENSBTAP00000018144/1-369 NVHVYSNGRM RYTYHQRQDR RENQGDGGLG VFVQLMPILI LILVSALSQL ENSP00000345575/1-409 NVHVYSNGRM RYTYQQRQDR RDNQGDGGLG VFVQLMPILI LILVSALSQL bmy_16737T0/1-376 NVHVYSNGRM RYTYHQRQDR RENQGDGGLG VFVQLMPILI LILVSALSQL BACU001917/1-378 NVHVYSNGRM RYTYHQRQDR RENQGDGGLG VFVQLMPILI LILVSALSQL 301 350 ENSTTRP00000009254/1-376 MVSSPPYSLS LRPSVGHVHR RVTDHLNVVY YVADTFSEEY TGSSLKMVER ENSBTAP00000018144/1-369 MVSSPPYSLS LRPSVGHVHK RVTDHLNVVY YVADTFSQEY TGSSLKMVER ENSP00000345575/1-409 MVSSPPYSLS PRPSVGHIHR RVTDHLGVVY YVGDTFSEEY TGSSLKTVER bmy_16737T0/1-376 MVSSPPYSLS LRPSVGHVHR RVTDHLNVVY YVADTFSEEY TGSSLKMVER BACU001917/1-378 MVSSPPYSLS LRPSVGHVHR RVTDHLNVVY YVADTFSEEY TGSSLKMVER 351 400 ENSTTRP00000009254/1-376 NVEDDYIANL RNNCWKEKQQ KEGLLYRARY FGDADMYHKA QKMGTPSCNR ENSBTAP00000018144/1-369 NVEDDYIANL RNNCWKEKQQ KEGLLYRARY FGDADMYNKA QKMGPQA--- ENSP00000345575/1-409 NVEDDYIANL RNNCWKEKQQ KEGLLYRARY FGDTDMYHRA QKMGTPSCSR bmy_16737T0/1-376 NVEDDYIANL RNNCWKEKQQ KEGLLYRARY FGDADMYHKA QKMGTPSCNR BACU001917/1-378 NVEDDYIANL RNNCWKEKQQ KEGLLYRARY FGDADMYHKA QKMGTPSCNR 401 450 ENSTTRP00000009254/1-376 LSEVQASLHG -- ENSBTAP00000018144/1-369 VTDCQRC--- -- ENSP00000345575/1-409 LSEVQASLHG -- bmy_16737T0/1-376 LSEVQASLHG -- BACU001917/1-378 LSETMKSLEN LW