KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:03:47 2014 Check: 00 .. Name: ENSTTRP00000007815/1-376 Len: 395 Check: 2751 Weight: 1.00 Name: bmy_18724T0/1-394 Len: 395 Check: 9524 Weight: 1.00 Name: ENSP00000452454/1-376 Len: 395 Check: 4844 Weight: 1.00 Name: ENSBTAP00000018145/1-378 Len: 395 Check: 974 Weight: 1.00 // 1 50 ENSTTRP00000007815/1-376 MANS------ ---------- ---ANTNTMP KLYRSVIEDV INDVRDIFLD bmy_18724T0/1-394 MEDQKDGADQ PEHCSGSSSG ITQHNSGVKP KLYRSVIEDV INDVRDIFLD ENSP00000452454/1-376 MANS------ ---------- ---ANTNTVP KLYRSVIEDV INDVRDIFLD ENSBTAP00000018145/1-378 MDRR------ ---------- -LLEPTKKKP KLYRSVIEDV INDVRDIFLD 51 100 ENSTTRP00000007815/1-376 DGVDEQVLME LKTXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_18724T0/1-394 DGVDEQVLME LKTLWENKLM QSRAVDGFHS EEQQLLLQVQ QQQQPQQQQH ENSP00000452454/1-376 DGVDEQVLME LKTLWENKLM QSRAVDGFHS EEQQLLLQVQ QQHQPQQQQH ENSBTAP00000018145/1-378 DGVDEQVLME LKTLWENKLM QSRAVDGFHS EEQQLLLQVQ QQHQPQQQQH 101 150 ENSTTRP00000007815/1-376 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXAAPQVIVP DSKLIQHMNA bmy_18724T0/1-394 HHHHHH-QAQ PQPTVPQQAQ TQQVLIPASQ QAAAPQVIVP DSKLIQHMNA ENSP00000452454/1-376 HHHHHHQQAQ PQQTVPQQAQ TQQVLIPASQ QATAPQVIVP DSKLIQHMNA ENSBTAP00000018145/1-378 HHHHHHQQAQ PQQTVPQQAQ AQQVLIPASQ QAAAPQVIVP DSKLIQHMNA 151 200 ENSTTRP00000007815/1-376 SNMXXXXXXX XXXXXXXVTP VQQILTNSGQ LLQVVRAANG AQYIFQPQQS bmy_18724T0/1-394 SNMSAAATAA TLALPAGVTP VQQILTNSGQ LLQVVRAANG AQYIFQPQQS ENSP00000452454/1-376 SNMSAAATAA TLALPAGVTP VQQILTNSGQ LLQVVRAANG AQYIFQPQQS ENSBTAP00000018145/1-378 SNMSAAATAA TLALPAGVTP VQQILTNSGQ LLQVVRAANG AQYIFQPQQS 201 250 ENSTTRP00000007815/1-376 VVLQQQVIPQ MQPGGVQAPV IQQVLAPLPG GISPQTGVII QPQQILFTGN bmy_18724T0/1-394 VVLQQQVIPQ MQPGGVQAPV IQQVLAPLPG GISPQTGVII QPQQILFTGN ENSP00000452454/1-376 VVLQQQVIPQ MQPGGVQAPV IQQVLAPLPG GISPQTGVII QPQQILFTGN ENSBTAP00000018145/1-378 VVLQQQVIPQ MQPGGVQAPV IQQVLAPLPG GISPQTGVII QPQQILFTGN 251 300 ENSTTRP00000007815/1-376 KTQVIPTTVA APTPAQAQLT AAGQQQPQAQ PAQQQAPLVL QVDGTGDTSS bmy_18724T0/1-394 KTQVIPTTVA APTPAQAQLT AAGQQQPQAQ PAQQQAPLVL QVDGTGDTSS ENSP00000452454/1-376 KTQVIPTTVA APTPAQAQIT ATGQQQPQAQ PAQTQAPLVL QVDGTGDTSS ENSBTAP00000018145/1-378 KTQVIPTTVA APTPAQAQIT ATGQQQPQAQ PAQQQAPLVL QVDGTGDTSS 301 350 ENSTTRP00000007815/1-376 EEDEDEEEDY DDEEEEDKEK DGAEDGQVEE EPLNSEDDVS DEEGQELFDT bmy_18724T0/1-394 EEDEDEEEDY DDEEEEDKEK DGAEDGQVEE EPLNSEDDVS DEEGQELFDT ENSP00000452454/1-376 EEDEDEEEDY DDDEEEDKEK DGAEDGQVEE EPLNSEDDVS DEEGQELFDT ENSBTAP00000018145/1-378 EEDEDEEEDY DDDEEEDKEK DGAEDGQVEE EPLNSEDDVS DEEGQELFDT 351 400 ENSTTRP00000007815/1-376 ENVVVCQYDK IHRSKNKWKF HLKDGIMNLN GRDYIFSKAI GDAEW bmy_18724T0/1-394 ENVVVCQYDK IHRSKNKWKF HLKDGIMNLN GRDYIFSKAI GDAEW ENSP00000452454/1-376 ENVVVCQYDK IHRSKNKWKF HLKDGIMNLN GRDYIFSKAI GDAEW ENSBTAP00000018145/1-378 ENVVVCQYDK IHRSKNKWKF HLKDGIMNLN GRDYIFSKAI GDAEW