KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:03:50 2014 Check: 00 .. Name: ENSTTRP00000001473/1-1132 Len: 1210 Check: 7263 Weight: 1.00 Name: ENSP00000346560/1-1135 Len: 1210 Check: 8492 Weight: 1.00 Name: bmy_06524T0/1-1140 Len: 1210 Check: 1439 Weight: 1.00 Name: ENSBTAP00000018161/1-934 Len: 1210 Check: 9980 Weight: 1.00 // 1 50 ENSTTRP00000001473/1-1132 MRSRSSDTEG SAQKQFPRHS EDYSFQGPEN MKQRQQDKDP TSESDAMLPY ENSP00000346560/1-1135 MRSRGSDTEG SAQKKFPRHT KGHSFQGPKN MKHRQQDKDS PSESDVILPC bmy_06524T0/1-1140 ---------- --MTRLARQ- EGASVPGPPP IPLRGEPG-- --------PT ENSBTAP00000018161/1-934 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001473/1-1132 PKS---HSGN GHQGEDLSRD DLLFLLSILE GELQARDEVI GILKADKMDL ENSP00000346560/1-1135 PKAEKPHSGN GHQAEDLSRD DLLFLLSILE GELQARDEVI GILKAEKMDL bmy_06524T0/1-1140 VRSHGPSVGG AGARCSAAAA DL-----AVT GAPAARAAHA ERLIRQRSDV ENSBTAP00000018161/1-934 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000001473/1-1132 ALLEAQYGFV TPKKVLEALQ RDAFQAKSAP WQEDIYEKPM NELDKVVEKH ENSP00000346560/1-1135 ALLEAQYGFV TPKKVLEALQ RDAFQAKSTP WQEDIYEKPM NELDKVVEKH bmy_06524T0/1-1140 TPIGRARS-- APRSHCSGDS RSAHSPLAAP ---------- ---------- ENSBTAP00000018161/1-934 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000001473/1-1132 KESHRRILEQ LLMVEKSHRQ TILELEEEKR KHKEYMEKSD EFISLLEQER ENSP00000346560/1-1135 KESYRRILGQ LLVAEKSRRQ TILELEEEKR KHKEYMEKSD EFICLLEQEC bmy_06524T0/1-1140 RDCGPRPTPA RPPPGSGAGD SVLQ------ ------GKVN AFT------- ENSBTAP00000018161/1-934 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000001473/1-1132 ERLKRLIDQE TESQKKKEQE KEKRVTALKE ELTKLKSFAL MVVDEQQRLT ENSP00000346560/1-1135 ERLKKLIDQE IKSQEEKEQE KEKRVTTLKE ELTKLKSFAL MVVDEQQRLT bmy_06524T0/1-1140 -RLKRLIDQE TESQKKKEQE KEKRVTALKE ELTKLKSFAL MVVDEQQRLT ENSBTAP00000018161/1-934 -RLKRLIDQE TESREKKEQE KEKRVTALKE ELTKLKSFAL MVVDEQQRLT 251 300 ENSTTRP00000001473/1-1132 AQLALQRQKI QDLTTSAKET HAKLALAEAR VQEEEQKATR LENDLHTQTT ENSP00000346560/1-1135 AQLTLQRQKI QELTTNAKET HTKLALAEAR VQEEEQKATR LEKELQTQTT bmy_06524T0/1-1140 AQLALQRQKI QDLTTSAKET HAKLALAEAR VQEEEQKATR LENDLQTQTT ENSBTAP00000018161/1-934 AQLALQRQKI QDLTTSAKET HAKLALAEAR AQEEEQKATR LENELQTQTT 301 350 ENSTTRP00000001473/1-1132 KFHQNQETIM AKLTNEDSQN RQLRQKLAAL SRQIDELEET NRSLRKAEEE ENSP00000346560/1-1135 KFHQDQDTIM AKLTNEDSQN RQLQQKLAAL SRQIDELEET NRSLRKAEEE bmy_06524T0/1-1140 KFHQNQETIM AKLTNEDSQN RQLRQKLAAL SRQIDELEET NRSLRKAEEE ENSBTAP00000018161/1-934 KFHQNQETIM AKLTNEDSQN RQLRQKLAAL SRQIDELEET NRSLRKAEEE 351 400 ENSTTRP00000001473/1-1132 LQDIKEKINK GEYGNSSIMA EVEELRKRVL EMEGKDEELI KMEEQCRDLN ENSP00000346560/1-1135 LQDIKEKISK GEYGNAGIMA EVEELRKRVL DMEGKDEELI KMEEQCRDLN bmy_06524T0/1-1140 LQDIKEKINK GEYGNSSIMA EVEELRKRVL EMEGKDEELI KMEEQCRDLN ENSBTAP00000018161/1-934 LQDIKEKINK GEYGNSSIMT EVEELRKRVL EMEGKDEELI KMEEQCRDLN 401 450 ENSTTRP00000001473/1-1132 KRLEKETSQS KDFKLEVEKL NKRIMALEKL EDAFNKSKQE CYSLKCNLEK ENSP00000346560/1-1135 KRLERETLQS KDFKLEVEKL SKRIMALEKL EDAFNKSKQE CYSLKCNLEK bmy_06524T0/1-1140 KRLEKETSLS KDFKLEVEKL SKRIMALEKL EDAFNKSKQE CYSLKCNLEK ENSBTAP00000018161/1-934 KRLEKETSQS KDFKLEVEKL NKKIMALEKL EDAFSKSKQE CYSLKCNLEK 451 500 ENSTTRP00000001473/1-1132 ERMTTKQLSQ ELESLKIRIK ELEAIESRLE KTEFTLKEDL TKLKTLTVML ENSP00000346560/1-1135 ERMTTKQLSQ ELESLKVRIK ELEAIESRLE KTEFTLKEDL TKLKTLTVMF bmy_06524T0/1-1140 ERMTTKQLSQ ELESLKVRIK ELEAIESRLE KTEFTLKEDL TKLKTLTVML ENSBTAP00000018161/1-934 ERMTTKQLSQ ELESLKIRIK ELEAIESRLE KTEFTLKEDL TKLKTLTVML 501 550 ENSTTRP00000001473/1-1132 VDERKTMSEK LKQTEDKLQA AASQLQVEQN KVTTVTEKLI EETKRALKSK ENSP00000346560/1-1135 VDERKTMSEK LKKTEDKLQA ASSQLQVEQN KVTTVTEKLI EETKRALKSK bmy_06524T0/1-1140 VDERKTMSEK LKQTEDKLQA AASQLQVEQN KVTTVTEKLI EETKRALKSK ENSBTAP00000018161/1-934 VDERKTMSEK LKQTEDKLQA AASQLQVEQN KVTTVTEKLI EETKRALKSK 551 600 ENSTTRP00000001473/1-1132 TDVEEKMYSV TKERDDLKNK LKAEEEKGND LLSKVNMLKN RLQSLEATEK ENSP00000346560/1-1135 TDVEEKMYSV TKERDDLKNK LKAEEEKGND LLSRVNMLKN RLQSLEAIEK bmy_06524T0/1-1140 TDVEEKMYSV TKERDDLKNK LKAEEEKGND LLSKVNMLKN RLQSLEAIEK ENSBTAP00000018161/1-934 TDVEEKMYSV TKERDDLKNK LKAEEEKGND LLSKVNVLKN RLQSLEAIEK 601 650 ENSTTRP00000001473/1-1132 DFLKNKLNQD SGKSTIALHQ ENNKIKELSQ EVERLKLKLK DMKSIEDDLM ENSP00000346560/1-1135 DFLKNKLNQD SGKSTTALHQ ENNKIKELSQ EVERLKLKLK DMKAIEDDLM bmy_06524T0/1-1140 DFLKNKLNQD SGKSTTALHQ ENNRIKELSQ EVERLKLKLK DMKAIEDDLM ENSBTAP00000018161/1-934 DFLKNKLNQD SGKSTTALHQ ENNKIKELSQ EVERLKLKLK DMKAIEDDLM 651 700 ENSTTRP00000001473/1-1132 KTEDEYETLE RRYANERDKA QFLSEELEHV KMELAKYKLA EKTDSSHEQW ENSP00000346560/1-1135 KTEDEYETLE RRYANERDKA QFLSKELEHV KMELAKYKLA EKTETSHEQW bmy_06524T0/1-1140 KTEDEYETLE RRYANERDKA QFLSEELEHV KMELAKYKLA EKTESSHEQW ENSBTAP00000018161/1-934 KTEDEYETLE RRYANERDKA QFLSEELEHV KMELAKYKLA EKTESSHEQW 701 750 ENSTTRP00000001473/1-1132 LFKRLQEEEA KSGHLSREVD ALKEKIHEYM ATEDLICLLQ GDHSVLQKKL ENSP00000346560/1-1135 LFKRLQEEEA KSGHLSREVD ALKEKIHEYM ATEDLICHLQ GDHSVLQKKL bmy_06524T0/1-1140 LFKRLQEEEA KSGHLSREVD ALKEKIHEYM ATEDLICHLQ GDHSVLQKKL ENSBTAP00000018161/1-934 LFKRLQEEEA KSGHLSREVD ALKEKIHEYM ATEDLICHLQ GDHSVLQKKL 751 800 ENSTTRP00000001473/1-1132 SQQENRNRDL GREIENLTKE LERYRHFSKS LRPSLNGRRI SDPQVFSKEV ENSP00000346560/1-1135 NQQENRNRDL GREIENLTKE LERYRHFSKS LRPSLNGRRI SDPQVFSKEV bmy_06524T0/1-1140 SQQENRNRDL GREIENLTKE LERYRHFSKS LRPSLNGRRI SDPQVFSKEV ENSBTAP00000018161/1-934 NQQENRNRDL GREIENLTKE LERYRHFSKS LRPNLNGRRI SDPQVFSKEV 801 850 ENSTTRP00000001473/1-1132 QTEAVDNEPP DYKSLIPLER AVINGQLYEE SEDQNEDPND EESVLSFKCN ENSP00000346560/1-1135 QTEAVDNEPP DYKSLIPLER AVINGQLYEE SENQDEDPND EGSVLSFKCS bmy_06524T0/1-1140 QTEAVDSEPP DYKSLIPLER AVINGQLYEE SEDQNEDPHD EESVLSFKCN ENSBTAP00000018161/1-934 QTEAVDNEPP DYKSLIPLER AVINGQLYEE SEDQDEDPND EESVLSFKCN 851 900 ENSTTRP00000001473/1-1132 SSTPCPVNRK LWIPWMKSKE GHPQNGKIQT KPNGNFVQPG DLVLSHTPGQ ENSP00000346560/1-1135 QSTPCPVNRK LWIPWMKSKE GHLQNGKMQT KPNANFVQPG DLVLSHTPGQ bmy_06524T0/1-1140 SSTPCPVNRK LWIPWMKSKE GHPQNGKIQT KPSGNFVQPG DLVLSHTPGQ ENSBTAP00000018161/1-934 SSTPCPVNRK LWIPWMKSKE SHPQNGKIQT KPNGNFMQPG DLVLSHTPGQ 901 950 ENSTTRP00000001473/1-1132 PLHIKVTPDH VQNTATLEIT SXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000346560/1-1135 PLHIKVTPDH VQNTATLEIT SPTTESPHSY TSTAVIPNCG TPKQRITILQ bmy_06524T0/1-1140 PLHIKVTPDH VQNTATLEIT SPTTESPHSY TSTAVIPNCG TPKQRITILQ ENSBTAP00000018161/1-934 PLHIKVTPDH VQNTATLEIT SPTTESPHSY TSTAVIPNCG TPKQRITILQ 951 1000 ENSTTRP00000001473/1-1132 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000346560/1-1135 NASITPVKSK TSTEDLMNLE QGMSPITMAT FARAQTPESC GSLTPERTMS bmy_06524T0/1-1140 NASITPVKSK TSAEGLMNFE QGMSPITMAT FARAQTPESC GSITPERTMS ENSBTAP00000018161/1-934 NASITPVKSK TSAEGLMNLE QGMSPITMAT FARAQTPESC GSITPERTMS 1001 1050 ENSTTRP00000001473/1-1132 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000346560/1-1135 PIQVLAVTGS ASSPEQGRSP EPTEISAKHA IFRVSPDRQS SWQFQRSNSN bmy_06524T0/1-1140 PIQVLAVTGS ASSPEQGRSP EPIEISAKHA IFRVSPDRQS SWQFQRSNSN ENSBTAP00000018161/1-934 PIQVLAVTGS ASSPEQGRSP EPIEISAKHA IFRVSPDRQS SWQFQRSNSN 1051 1100 ENSTTRP00000001473/1-1132 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000346560/1-1135 SSSVITTEDN KIHIHLGSPY MQAVASPVRP ASPSAPLQDN RTQGLINGAL bmy_06524T0/1-1140 SSSVITTEDN KIHIHLGSPY MQAVASPVRP ASPSASLQDN RTQSLTNGAL ENSBTAP00000018161/1-934 SSSVITTEDN KIHIHLGSPY MQAVASPVRP ASPSTPLQDN RTQGLTNGAL 1101 1150 ENSTTRP00000001473/1-1132 XXXXXXXXXX XXXXXXXXXX XXXXXXX--- ---------- ---------- ENSP00000346560/1-1135 NKTTNKVTSS ITITPTATPL PRQSQIT--- ---------- ---------- bmy_06524T0/1-1140 NKTTNKVTSS ITITPTATPL PRQSQITMDS STVQSNMSQQ AAPKGNAVGD ENSBTAP00000018161/1-934 NKTTNKVTSS ITITPTATPL PRQSQIT--- ---------- ---------- 1151 1200 ENSTTRP00000001473/1-1132 ------IKAR ---------- ---------- ---------- ---------- ENSP00000346560/1-1135 ------VEPL ---------- ---------- ---------- ---------- bmy_06524T0/1-1140 TDRAPNITCL RSASEACRFG QNTRNTPTYA SSPLLYLDRI LFSHQVIYTE ENSBTAP00000018161/1-934 ------VKCL ---------- ---------- ---------- ---------- 1201 1250 ENSTTRP00000001473/1-1132 ------PLPQ ENSP00000346560/1-1135 ------LLPH bmy_06524T0/1-1140 RIRKPELVQL ENSBTAP00000018161/1-934 ------LILH