KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:03:50 2014 Check: 00 .. Name: bmy_16557T0/1-317 Len: 496 Check: 1777 Weight: 1.00 Name: ENSTTRP00000004176/1-474 Len: 496 Check: 8765 Weight: 1.00 Name: ENSP00000315654/1-466 Len: 496 Check: 361 Weight: 1.00 Name: ENSBTAP00000018162/1-427 Len: 496 Check: 681 Weight: 1.00 // 1 50 bmy_16557T0/1-317 MDLAPGRCT- ---------- ---------- GVAPPARA-- -----GGA-- ENSTTRP00000004176/1-474 --MGPWPCSP ---------- ---------- GGVGGARARH VIINVGGCRV ENSP00000315654/1-466 --MEPWPCSP ---------- ---------- GGGGGTRARH VIINVGGCRV ENSBTAP00000018162/1-427 --SVPLQAQP PDPGAAHGAM ALLPGPAERR GGGGGARARH VIINVGGCRV 51 100 bmy_16557T0/1-317 ----GAFVPP P-------TS TRG------- ---------- ----RSP--- ENSTTRP00000004176/1-474 RLAWAALARC PLARLERLRA CRGHDELLRV CDDYDVSRDE FFFDRSPCAF ENSP00000315654/1-466 RLAWAALARC PLARLERLRA CRGHDDLLRV CDDYDVSRDE FFFDRSPCAF ENSBTAP00000018162/1-427 RLAWAALARC PLARLERLRT CRGHDELLRV CDDYDVSRDE FFFDRSPCAF 101 150 bmy_16557T0/1-317 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004176/1-474 RAIVALLRAG KLRLLRGACA LAFRDELAYW GIDEARLERC CLRRLRRREE ENSP00000315654/1-466 RAIVALLRAG KLRLLRGPCA LAFRDELAYW GIDEARLERC CLRRLRRREE ENSBTAP00000018162/1-427 RAI------- ---------- ---------- ---------- ---------- 151 200 bmy_16557T0/1-317 ---------- ---PEGEPAA ALGPG----- -------MMG DP-------- ENSTTRP00000004176/1-474 EAAEARAGPA ERGGPGSPAC APGSRGRLAR GRRRLRDVLD DPRSGPAGKL ENSP00000315654/1-466 EAAEARAGPT ERGAQGSPAR ALGPRGRLQR GRRRLRDVVD NPHSGLAGKL ENSBTAP00000018162/1-427 ---------- ------XPAC TPRPGGRLAR GRRRLRDVVD DPRSGPAGKL 201 250 bmy_16557T0/1-317 ---------- ---------- -------EPK GECSPRCRSL FVLETVCVAW ENSTTRP00000004176/1-474 FACVSVAFVA VTAVGLCLST MPDIRAEEER XXXXXXXXXX XXXXXXXXXX ENSP00000315654/1-466 FACVSVSFVA VTAVGLCLST MPDIRAEEER GECSPKCRSL FVLETVCVAW ENSBTAP00000018162/1-427 FACVSVAFVA VTAVGLCLST MPDIRAEEER GECSPKCRNL FVLETVCVAW 251 300 bmy_16557T0/1-317 FSFEFLLRSL QAESKCAFLR TPLNVIDILA ILPFYVSLLV GLAARPGAGG ENSTTRP00000004176/1-474 XXXXXLLRSL QAESKCAFLR TPLNIIDILA ILPFYVSLLV GLAARPGAGG ENSP00000315654/1-466 FSFEFLLRSL QAESKCAFLR APLNIIDILA LLPFYVSLLL GLAAGPG--G ENSBTAP00000018162/1-427 FSFEFLLRSL QAESKCAFLR TPLNIIDILA ILPFYVSLLV GLAARPGAGG 301 350 bmy_16557T0/1-317 SKLLERAGLV LRLLRALRVL SVMRLARHSL GLRSLGLTVR RCAREFGLLL ENSTTRP00000004176/1-474 NKLLERAGLV LRLLRALRVL YVMRLARHSL GLRSLGLTVR RCAREFGLLL ENSP00000315654/1-466 TKLLERAGLV LRLLRALRVL YVMRLARHSL GLRSLGLTMR RCAREFGLLL ENSBTAP00000018162/1-427 NKLLERAGLV LRLLRALRVL YVMRLARHSL GLRSLGLTVR RCAREFGLLL 351 400 bmy_16557T0/1-317 LFLCVAMALF APLVHLAERE LGARRDFSSV PASYWWAVIS MTTVGYGDMV ENSTTRP00000004176/1-474 LFLCVAMALF APLVHLAERE LGARRDFSSV PASYWWAVIS MTTVGYGDMV ENSP00000315654/1-466 LFLCVAMALF APLVHLAERE LGARRDFSSV PASYWWAVIS MTTVGYGDMV ENSBTAP00000018162/1-427 LFLCVAMALF APLVHLAERE LGARRDFSSV PASYWWAVIS MTTVGYGDMV 401 450 bmy_16557T0/1-317 PRSLPGQVVA LSSILSGILL MAFPVTSIFH TFSRSYSELK EQQQRAASPE ENSTTRP00000004176/1-474 PRSLPGQVVA LSSILSGILL MAFPVTSIFH TFSRSYSELK QQQQRAASPE ENSP00000315654/1-466 PRSLPGQVVA LSSILSGILL MAFPVTSIFH TFSRSYSELK EQQQRAASPE ENSBTAP00000018162/1-427 PRSLPGQVVA LSSILSGILL MAFPVTSIFH TFSRSYSELK EQQQRAASPE 451 500 bmy_16557T0/1-317 PALREDSTRS ASAT----ED DGSQGPDGAG PAGDSVAGPW ASAGPP ENSTTRP00000004176/1-474 PALREDSTHS ASACASAAED DNSQGPDGAG PTGDSAAALW ASAGPP ENSP00000315654/1-466 PALQEDSTHS ATAT-----E DSSQGPDSAG LADDSADALW VRAGR- ENSBTAP00000018162/1-427 PALREDSTRS ASASATATED DGSQSPDGAG SAGASAEGPW AP----