KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:51 2014 Check: 00 .. Name: ENSTTRP00000005092/1-662 Len: 668 Check: 933 Weight: 1.00 Name: ENSP00000160827/1-665 Len: 668 Check: 4520 Weight: 1.00 Name: ENSBTAP00000018167/1-662 Len: 668 Check: 2963 Weight: 1.00 Name: bmy_00766T0/1-636 Len: 668 Check: 140 Weight: 1.00 Name: BACU011920/1-651 Len: 668 Check: 3757 Weight: 1.00 // 1 50 ENSTTRP00000005092/1-662 -MDAGVPARR RREMAT---- ATSGAGRCRL SKVGXXXXXX XXXXXXXXXX ENSP00000160827/1-665 MAAGGSTQQR RREMAAASAA AISGAGRCRL SKIGATRRPP PARVRVAVRL ENSBTAP00000018167/1-662 -MDAGLPARR RREMAA---- AISGAGRCRL SKVGAGRRPP PARVRVAVRL bmy_00766T0/1-636 ---------- ---------- ---------- --MGAGRRPP PARVRVAVRL BACU011920/1-651 ---------- ---MAA---- ATSGASRCRL SKVGAGRRPP PARVRVAVRL 51 100 ENSTTRP00000005092/1-662 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXF DAFYGERSSQ ENSP00000160827/1-665 RPFVDGTAGA SDPPCVRGMD SCSLEIANWR NHQETLKYQF DAFYGERSTQ ENSBTAP00000018167/1-662 RPFVDGTAGE NDTPCVRGLD SCSLEIANWR NHQETLKYQF DAFYGERSSQ bmy_00766T0/1-636 RPFVDGTAGE NDTPCVRGLD SCSLEIANWR NHQETLKYQF DAFYGERSSQ BACU011920/1-651 RPFVDGTAGE NDTPCVRGLD SCSLEIANWR NHQETLKYQF DAFYGERSSQ 101 150 ENSTTRP00000005092/1-662 QDIYAGSVQP ILRHLLEGQN ASVLAYGPTG AGKTHTMLGS PEQPGVIPRA ENSP00000160827/1-665 QDIYAGSVQP ILRHLLEGQN ASVLAYGPTG AGKTHTMLGS PEQPGVIPRA ENSBTAP00000018167/1-662 QDIYAGSVQP ILRHLLEGQN ASVLAYGPTG AGKTHTMLGS PEQPGVIPRA bmy_00766T0/1-636 QDIYAGSVQP ILRHLLEGQN ASVLAYGPTG AGKTHTMLGS PEQPGVIPRA BACU011920/1-651 QDIYAGSVQP ILRHLLEGQN ASVLAYGPTG AGKTHTMLGS PEQPGVIPRA 151 200 ENSTTRP00000005092/1-662 LMDLLQLTRE ESAEGRPWAL SVTMSYLEIY QEKVLDLLEP SSGDLVIRED ENSP00000160827/1-665 LMDLLQLTRE EGAEGRPWAL SVTMSYLEIY QEKVLDLLDP ASGDLVIRED ENSBTAP00000018167/1-662 LMDLLQLTRE EGAEGRPWAL SVTMSYLEIY QEKVLDLLEP SSGDLVIRED bmy_00766T0/1-636 LMDLLQLTRE ESAEGRPWAL SVTMSYLEIY QEKVLDLLEP SSGDLVIRED BACU011920/1-651 LMDLLQLTRE ESAEGRPWAL SVTMSYLEIY QEKVLDLLEP SSGDLVIRED 201 250 ENSTTRP00000005092/1-662 CRGNILIPGL TQKPITSFAD FERHFLPASR NRTVGATRLN QRSSRSHAVL ENSP00000160827/1-665 CRGNILIPGL SQKPISSFAD FERHFLPASR NRTVGATRLN QRSSRSHAVL ENSBTAP00000018167/1-662 CRGNILIPGL TQKPITSFAD FERHFLPASR NRTVGATRLN QRSSRSHAVL bmy_00766T0/1-636 CRGNILIPGL TQKPITSFAD FERHFLPASR NRTVGATRLN QRSSRSHAVL BACU011920/1-651 CRGNILIPGL TQKPITSFAD FERHFLPASR NRTVGATRLN QRSSRSHAVL 251 300 ENSTTRP00000005092/1-662 LVKVDQRERL APFRQREGKL YLIDLAGSED NRRTGNKGLR LKESGAINTS ENSP00000160827/1-665 LVKVDQRERL APFRQREGKL YLIDLAGSED NRRTGNKGLR LKESGAINTS ENSBTAP00000018167/1-662 LVKVDQRERL APFRQREGKL YLIDLAGSED NRRTGNKGLR LKESGAINTS bmy_00766T0/1-636 LVKVDQRERL APFRQREGKL YLIDLAGSED NRRTGNKGLR LKESGAINTS BACU011920/1-651 LVKVDQRERL APFRQREGKL YLIDLAGSED NRRTGNKGLR LKESGAINTS 301 350 ENSTTRP00000005092/1-662 LFVLGKVVDA LNQGLPRVPY RDSKLTRLLQ DSLGGSAHSI LIANIAPERC ENSP00000160827/1-665 LFVLGKVVDA LNQGLPRVPY RDSKLTRLLQ DSLGGSAHSI LIANIAPERR ENSBTAP00000018167/1-662 LFVLGKVVDA LNQGLPRVPY RDSKLTRLLQ DSLGGSAHSI LIANIAPERR bmy_00766T0/1-636 LFVLGKVVDA LNQGLPRVPY RDSKLTRLLQ DSLGGSAHSI LIANIAPERR BACU011920/1-651 LFVLGKVVDA LNQGLPRVPY RDSKLTRLLQ DSLGGSAHSI LIANIAPERR 351 400 ENSTTRP00000005092/1-662 FYLDTVSALN FAARSKEVIN RPFTNESLQL HVLAPIKLSK KELLGPSEAK ENSP00000160827/1-665 FYLDTVSALN FAARSKEVIN RPFTNESLQP HALGPVKLSQ KELLGPPEAK ENSBTAP00000018167/1-662 FYLDTVSALN FAARSKEVIN RPFTNESLQL PVLAPVKLSQ KELLGPSEAK bmy_00766T0/1-636 FYLDTVSALN FAARSKEVIN RPFTNESLQL HVLAPIKLSK KELLGPSEAK BACU011920/1-651 FYLDTVSALN FAARSKEVIN RPFTNESLQL HVLAPIKLSK KELLGPSEAK 401 450 ENSTTRP00000005092/1-662 RARGPEEEET GSPEPPAAPS STSQKLSPLQ KLNSMDPAMV ERLLSLDRLL ENSP00000160827/1-665 RARGPEEEEI GSPEPMAAPA SASQKLSPLQ KLSSMDPAML ERLLSLDRLL ENSBTAP00000018167/1-662 RARGPEEEET ESPELPIAPA SASQKLSPLQ KLSSMDPAML ERLLSLDRLL bmy_00766T0/1-636 RARGPEEEET GSPEPPAAPS SASQKLSPLQ KLSSMDPAMV ERLLSLDRLL BACU011920/1-651 RARGPEEEET GSPEPPAAAS SASQKLSPLQ KLSSMDPAMV ERLLSLDRLL 451 500 ENSTTRP00000005092/1-662 GSQGSQGTPL LSTPRRERMV LMKTVEAKDL EIERLKMKQK ELEAKVLAQE ENSP00000160827/1-665 ASQGSQGAPL LSTPKRERMV LMKTVEEKDL EIERLKTKQK ELEAKMLAQK ENSBTAP00000018167/1-662 GSQGSQGTPL LSTPKRERMV LMKTVEEKDL EIERLKMKQK ELEAKVLAQE bmy_00766T0/1-636 GSQGSQGTPL LSTPRRERMV LMKTVEAKDL EIERLKMKQK ELEAKVLAQE BACU011920/1-651 GSQGSQGTPL LSTPRRERMV LMKTVEAKDL EIERLKMKQK ELEAKVLAQE 501 550 ENSTTRP00000005092/1-662 AADPKEKENY SPTMLRPLAR RTVTVAKPLK KAVVMPLQLI QEQAAYPNAE ENSP00000160827/1-665 A---EEKENH CPTMLRPLSH RTVTGAKPLK KAVVMPLQLI QEQAASPNAE ENSBTAP00000018167/1-662 AADPKEKENY STTMLRPLAR RTVTVAKPLK KAVVMPLQLI QEQAASPNAK bmy_00766T0/1-636 AADPKEKENY SPTMLRPLAR HTVTVAKPLK KAVVMPLQLI QEQAAYPSAE BACU011920/1-651 AADPKEKENY SPTMLRPLAR RTVTVAKPLK KAVVMPLQLI QEQAAYPSAE 551 600 ENSTTRP00000005092/1-662 IHILKKKGRK RKLESLDASE PEEKGEDCWE LQISPELLAH GRQKILDLLN ENSP00000160827/1-665 IHILKNKGRK RKLESLDALE PEEKAEDCWE LQISPELLAH GRQKILDLLN ENSBTAP00000018167/1-662 IHILKKKGRK RKLESLDASQ P-EKAEDGWE LQISPELLAH GRQKILDLLN bmy_00766T0/1-636 IHILKKKGRK RKLESLDASE PEEKGEDCWE LQISPELLAH GRQKILDLLN BACU011920/1-651 IHILKKKGRK RKLESLDASE PEERGEDCWE LQISPELLAH GRQKILDLLN 601 650 ENSTTRP00000005092/1-662 EGSARDLR-L QRIGQKKAQL IVGWRELHGP FSQVEDLERV EGISGKQMES ENSP00000160827/1-665 EGSARDLRSL QRIGPKKAQL IVGWRELHGP FSQVEDLERV EGITGKQMES ENSBTAP00000018167/1-662 EGSARDLRSL QRIGQKKAQL IVGWRELHGP FSQVEDLERV EGISGKQMES bmy_00766T0/1-636 EGSARDLRSL QRIGQKKAQL IVGWRELHGP FSQVEDLERV EGISGKQMES BACU011920/1-651 EGSARDLRSL QRIGQKKAQL IVGWRELHGP FSQVEDLERV EGITGKQMES 651 700 ENSTTRP00000005092/1-662 FLKANILGLA AGQRCGPS ENSP00000160827/1-665 FLKANILGLA AGQRCGAS ENSBTAP00000018167/1-662 FLKANILGLA AGQGCGPS bmy_00766T0/1-636 FLKANILGLA AGQRCGPS BACU011920/1-651 FLKANILGLA AGQRCGPS