KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:51 2014 Check: 00 .. Name: ENSP00000363345/1-475 Len: 478 Check: 331 Weight: 1.00 Name: ENSBTAP00000018168/1-472 Len: 478 Check: 406 Weight: 1.00 Name: ENSTTRP00000008816/1-362 Len: 478 Check: 3818 Weight: 1.00 Name: bmy_05192T0/1-475 Len: 478 Check: 9848 Weight: 1.00 Name: BACU007332/1-475 Len: 478 Check: 9260 Weight: 1.00 // 1 50 ENSP00000363345/1-475 MSPEVTCPRR GHLPRFHPRT WVEPVVASSQ VAASLYDAGL LLVVKASYGT ENSBTAP00000018168/1-472 MCQGSICPWR DPLPRLQVWT WIEPVVASTQ VATSLYDAGL LLVVKASFGV ENSTTRP00000008816/1-362 ---------- ---------- ---------- ---------- ---------- bmy_05192T0/1-475 MGPGTICPCR GPLPRLQAWT WVEPVVASTQ MATSLYDAGL LLVVKASFGV BACU007332/1-475 MGLGTICPCR GPLPRLQAWT WVEPVVASTQ MATSLYDAGL LLVVKASFGG 51 100 ENSP00000363345/1-475 GGSSNHSASP SPRGALEDQQ QRAISNFYII YNLVVGLSPL LSAYGLGWLS ENSBTAP00000018168/1-472 GTSSNHSSSP SPRGALEDEQ QRAISNFYIV YHLVMGLTPL LSAYGLGWLS ENSTTRP00000008816/1-362 ---------- ---------- ---------- ---------- ---------- bmy_05192T0/1-475 GVLSNHSASP SPQGTLENQQ QRAISNFYII YNLVMGLTPL LSAYGLGWLS BACU007332/1-475 GVLSNHSASP SPPRALENQQ QRAISNFYII YNLVMGLTPL LSAYGLGWLS 101 150 ENSP00000363345/1-475 DRYHRKISIC MSLLGFLLSR LGLLLKVLLD WPVEVLYGAA ALNGLFGGFS ENSBTAP00000018168/1-472 DRYHRKVSIC VPLLGFLLSR LVLLLKVLLD WPVEMLYAGA ALTGLCGGFS ENSTTRP00000008816/1-362 ---------- -SLLGFMLAR LALLLKVLLD WPVEMLYGAA ALNGLCGGFS bmy_05192T0/1-475 DRYHRKISIC VPLLGFMLSR LALLLKVLLD WPVEMLYGAA ALNGLCGGFS BACU007332/1-475 DRYHRKISIC MPLLGFMFSR LALLLKVLLD WPVEMLYGAA ALNGLCGGFS 151 200 ENSP00000363345/1-475 AFWSGVMALG SLGSSEGRRS VRLILIDLML GLAGFCGSMA SGHLFKQMAG ENSBTAP00000018168/1-472 AFWSGVMALG SLSSSEGRRS LRLIVIDLIL GLAGFCGSMV SGHLFKQMVG ENSTTRP00000008816/1-362 AFWSGVMALG SLGSSEGRRS LRLIVIDLIL GLAGFCGSMI SGHLFKQIVG bmy_05192T0/1-475 AFWSGVMALG SLGSSEGRRS LRLIVIDLIL GLAGFCGSMI SGHLFKQIVG BACU007332/1-475 AFWSGVMALG SLGSSEGRRS LRLIVIDLIL GLAGFCGSMI SGHLFKQIVG 201 250 ENSP00000363345/1-475 HSGQGLILTA CSVSCASFAL LYSLLVLKVP ESVAKPSQEL PAVDTVSGTV ENSBTAP00000018168/1-472 HSKQGLVLTA CSVSCATCAL LYSLFVLKVP ESKAKPRK-- -AVDIVPGTV ENSTTRP00000008816/1-362 HSSQGLVLTA FSVSCATCAL FYSLLVLKVP ESTAKPSK-- -AVDTVSGTV bmy_05192T0/1-475 HSSEGLVLTA FSVSCATCAL FYSLLVLKVP ESKAKPSK-- -AVDTVSGTA BACU007332/1-475 HSSQGLLLTA FSVSCATCAL FYSLLVLKVP ESKAKPSK-- -AVDTVSGTV 251 300 ENSP00000363345/1-475 GTYRTLDPDQ LDQQYAVGHP PSPGKAKPHK TTIALLFVGA IIYDLAVVGT ENSBTAP00000018168/1-472 GRYDTLDPDQ TDKQSVVRPP PPPATAKPKQ IIIGLLFVGA IIYDLAVVGT ENSTTRP00000008816/1-362 CTDNTLDPDP TDKQCVMRHP SSPAKAKPKK TIIALLFVGA ITYDLAVVGT bmy_05192T0/1-475 GTYNALDPDP TDMQSVVRHP SSPAKAKPEK TIIALLFVGA IVYDLAVVGT BACU007332/1-475 GTYNTLDPDP TDAQSVVRHP SSPAKAKPKK TIIALLFVGA IIYDLAVVGT 301 350 ENSP00000363345/1-475 VDVIPLFVLR EPLGWNQVQV GYGMAAGYTI FITSFLGVLV FSRCFRDTTM ENSBTAP00000018168/1-472 VDVMPLFVLR EPLSWNQVQV GYGMASGYTI FITSFLGVLV FSRYLQDTTM ENSTTRP00000008816/1-362 VDMMPLFLLR EPLSWNQVQL GYGMASGYTI FITSFLGVLV FSRYFQDTTM bmy_05192T0/1-475 VDMIPLFVLR EPLSWNQVQV GYGMASGYTI FITSFLGVLV FSRYFQDTTM BACU007332/1-475 VDVVPLFVLR EPLSWNQVQV GYGMAAGYTI FITSFLGVLV FSRYFQDTTM 351 400 ENSP00000363345/1-475 IMIGMVSFGS GALLLAFVKE TYMFYIARAV MLFALIPVTT IRSAMSKLIK ENSBTAP00000018168/1-472 IMIGMVSFAS GALLLAFVKE TYMFYIARAI MLFALIPVTT IRSAMSKLIK ENSTTRP00000008816/1-362 IMIGMVSFAS GALLLAFVKE TYMFYIARAV MLFALIPITT IRSAMSKLIK bmy_05192T0/1-475 IMIGMASFAS GALLLAFVKE TYMFYIARAV MLFALIPITT IRSAMSKLIK BACU007332/1-475 IIIGMVSFAS GALLLAFVKE TYMFYIARAV MLFALIPITT IRSAMSKLIK 401 450 ENSP00000363345/1-475 GSSYGKVFVI LQLSLALTGV VTSTLYNKIY QLTMDMFVGS CFALSSFLSF ENSBTAP00000018168/1-472 GSSYGKVFVI LQLSLTLTGV VTSTLYNKIY QLTMEKFIGT CFALSSFLSF ENSTTRP00000008816/1-362 GSSYGKVFVI LQLSLALTGV VTSTMYNKIY QLTMEKFVGT CFALSSFLSF bmy_05192T0/1-475 GSSYGKVFVI LQLSLALTGV VTSTVYNKIY QLTMEKFVGT CFALSSFLSF BACU007332/1-475 GSSYGKVFVI LQLSLALTGV VTSTVYNKIY QLTMEKFVGT CFALSSFLSC 451 500 ENSP00000363345/1-475 LAIIPISIVA YKQVPLSPYG DIIEK--- ENSBTAP00000018168/1-472 LAILPIGIVA YKQASWLQPG DITEK--- ENSTTRP00000008816/1-362 LAIIPIGIVA YMQASWLQHG DITEKG-- bmy_05192T0/1-475 LAIIPIGIVA YKQASWLQHG DIAEKGRC BACU007332/1-475 LAIIPIGIVA YKQASWLQHG DIAEKGRS