KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:51 2014 Check: 00 .. Name: ENSP00000315011/1-427 Len: 448 Check: 7956 Weight: 1.00 Name: ENSBTAP00000018173/1-427 Len: 448 Check: 8912 Weight: 1.00 Name: bmy_04756T0/1-393 Len: 448 Check: 5459 Weight: 1.00 Name: BACU018627/1-389 Len: 448 Check: 6242 Weight: 1.00 Name: ENSTTRP00000002303/1-427 Len: 448 Check: 8199 Weight: 1.00 // 1 50 ENSP00000315011/1-427 METLCLRASF WLALVGCVIS DNPERYSTNL SNHVDDFTTF RGTELSFLVT ENSBTAP00000018173/1-427 METFWLRLSF WVALVGGVIS DNPESYSTNL SIHVDSVATF HGTELSFVVT bmy_04756T0/1-393 METFCLRVLF GLALVGCVIS DNPESYSTNL STHVDDFTTF RGTELSFVVT BACU018627/1-389 METFCLRVLF GLALVGYVIS DNPESYSTNL STHVDDFTTF RGTELSFVVT ENSTTRP00000002303/1-427 METFCLRVLF GLALVGCVVS DNPESYSTNL STRVDDFTTF RGTELSFMVT 51 100 ENSP00000315011/1-427 THQPTNLVLP SNGSMHNYCP QQTKITSAFK YINTVISCTI FIVGMVGNAT ENSBTAP00000018173/1-427 THQPTNLALP SNGSMHNYCP QQTKITSAFK YINTVISCTI FIVGMVGNAT bmy_04756T0/1-393 THRPTNLALP XNGTMHNYCP QQTKITSAFK YINTVISCTI FIVGMVGNAT BACU018627/1-389 THRPTNLALP NNGSMHNYCP QQTKITSAFK YINTVISCTI FIVGMVGNAT ENSTTRP00000002303/1-427 THRPTNLALP NNGSMHNYCP QQTKITSAFK YINTVISCTI FIVGMVGNAT 101 150 ENSP00000315011/1-427 LLRIIYQNKC MRNGPNALIA SLALGDLIYV VIDLPINVFK LLAGRWPFDH ENSBTAP00000018173/1-427 LLRIIYQNKC MRNGPNALIA SLALGDLIYV VIDLPINVFK LLAGRWPFEQ bmy_04756T0/1-393 LLRIIYQNKC MRNGPNALIA SLALGDLIYV VIDLPINVFK ---------- BACU018627/1-389 LLRIIYQNKC MRNGPNALIA SLALGDLIYV VIDLPINVFK LLAGRWPFDH ENSTTRP00000002303/1-427 LLRIIYQNKC MRNGPNALIA SLALGDLIYV VIDLPINVFK LLAGRWPFDH 151 200 ENSP00000315011/1-427 NDFGVFLCKL FPFLQKSSVG ITVLNLCALS VDRYRAVASW SRVQGIGIPL ENSBTAP00000018173/1-427 NDFGVFLCKL FPFLQKSSVG ITVLNLCALS VDRYRAVASW SRVQGIGIPL bmy_04756T0/1-393 ---------- -----KSSVG ITVLNLCALS VDRYRAVASW SRVQGIGIPL BACU018627/1-389 NDFGVFLCKL FPFLQKSSVG ITVLNLCALS VDRYRAVASW SRVQGIGIPL ENSTTRP00000002303/1-427 NDFGVFLCKL FPFLQKSSVG ITVLNLCALS VDRYRAVASW SRVQGIGIPL 201 250 ENSP00000315011/1-427 VTAIEIVSIW ILSFILAIPE AIGFVMVPFE YRGEQHKTCM LNATSKFMEF ENSBTAP00000018173/1-427 VTAIEIVSIW ILSFILAIPE AIGFVMVPFE YKGAQHRTCM LNATSKFMEF bmy_04756T0/1-393 VTAIEIVSIW ILSFILAIPE AIGFVMVPFE YKGEQHKTCM LNATSRFMEF BACU018627/1-389 VTAIEIVSIW ILSFILAIPE AIGFVMVPFE YKGEQHKTCM LNATSKFMEF ENSTTRP00000002303/1-427 VTAIEIVSIW ILSFILAIPE AIGFVMVPFE YKGEQHKTCM LNATSKFMEF 251 300 ENSP00000315011/1-427 YQDVKDWWLF GFYFCMPLVC TAIFYTLMTC EMLNRRNGSL RIALSEHLKQ ENSBTAP00000018173/1-427 YQDVKDWWLF GFYFCMPLVC TAIFYTLMTC EMLNRRNGSL RIALSEHLKQ bmy_04756T0/1-393 YQDVKDWWLF GFYFCMPLVC TAIFYTLMTC EMLNRRNGSL RIALSEHLKQ BACU018627/1-389 YQDVKDWWLF GFYFCMPLVC TAIFYTLMTC EMLNRRNGSL RIALSEHLKQ ENSTTRP00000002303/1-427 YQDVKDWWLF GFYFCMPLVC TAIFYTLMTC EMLNRRNGSL RIALSEHLKQ 301 350 ENSP00000315011/1-427 RREVAKTVFC LVVIFALCWF PLHLSRILKK TVYNEMDKNR CELLSFLLLM ENSBTAP00000018173/1-427 RREVAKTVFC LVVIFALCWF PLHLSRILKK TVYDEMDTNR CELLSFLLLM bmy_04756T0/1-393 RREVAKTVFC LVVIFALCWF PLHLSRILKK TVYDEMDTNR CELLSFLLLM BACU018627/1-389 RREVAKTVFC LVVIFALCWF PLHLSRILKK TVYDEMDTNR CELLSFLLLM ENSTTRP00000002303/1-427 RREVAKTVFC LVVIFALCWF PLHLSRILKK TVYDEMDTNR CELLSFLLLM 351 400 ENSP00000315011/1-427 DYIGINLATM NSCINPIALY FVSKKFKNCF QSCLCCCCYQ SKSLMTSVPM ENSBTAP00000018173/1-427 DYIGINLATM NSCINPIALY FVSKKFKNCF QSCLCCCCYQ SKSLMTSVPM bmy_04756T0/1-393 DYIGINLATM NSCINPIALY FVSKKFKNCF Q--------- SKSLMTSVPM BACU018627/1-389 DYIGINLATM NSCINPIALY FVSKKFKNCF Q--------- ---------- ENSTTRP00000002303/1-427 DYIGINLATM NSCINPIALY FVSKKFKNCF Q--------- ---------- 401 450 ENSP00000315011/1-427 NGTSIQWKNH D--------- ---------- --QNNHNTDR SSHKDSMN ENSBTAP00000018173/1-427 NGTSIQWKNH E--------- ---------- --QNNHNTER SSHKDSIN bmy_04756T0/1-393 NGTSIQWKNH E--------- ---------- --QNNHNTER SSHKDSIN BACU018627/1-389 --V-RRFASI F--------- ---------- ---------- -------- ENSTTRP00000002303/1-427 --FWLRWVXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX SSHKDSIN