KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:52 2014 Check: 00 .. Name: ENSP00000396445/1-549 Len: 554 Check: 6549 Weight: 1.00 Name: ENSBTAP00000018177/1-553 Len: 554 Check: 4647 Weight: 1.00 Name: ENSTTRP00000012431/1-507 Len: 554 Check: 6648 Weight: 1.00 Name: bmy_08038T0/1-544 Len: 554 Check: 6071 Weight: 1.00 Name: BACU009431/1-507 Len: 554 Check: 6377 Weight: 1.00 // 1 50 ENSP00000396445/1-549 MPVWCCRCSL AGHF-RNYSD TETEGEIFNS LVQYFGDNLG RKVKAMPLVE ENSBTAP00000018177/1-553 MPVWCCRCSL AAHFRRNYSD TETEGEILNS LVQYFGDNLG QNVKAMPLVE ENSTTRP00000012431/1-507 ---------- ---------- ---------- ---------- -----MPLVE bmy_08038T0/1-544 --------ML PKTKLRNYSD PETEGEIFNS LVQYFGDNLG RKVKAMPLVE BACU009431/1-507 ---------- ---------- ---------- ---------- -----MPLVE 51 100 ENSP00000396445/1-549 ETSLLEDSSV TFPVVI--IG NGPSGICLSY MLSGYRPYLS SEAIHPNTIL ENSBTAP00000018177/1-553 ETSLLEDSSV TLPVVVIEIG NGPSGICLSY MLSGYRPYLS SEAIHPNTIL ENSTTRP00000012431/1-507 ETSLLEDSSV TLPVVV--IG NGPSGICLSY MLSGYRPYLS SEAIHPNTIL bmy_08038T0/1-544 ETSLLEDSSV TLPVVV--IG NGPSGICLSY MLSGYRPYLS SEAIHPNTIL BACU009431/1-507 ETSLLEDSSV TLPVVV--IG NGPSGICLSY MLSGYRPYLS SEAIHPNTIL 101 150 ENSP00000396445/1-549 NSKLEEARHL SIVDQDLEYL SEGLEGRSSN PVAVLFDTLL HPDADFGYDY ENSBTAP00000018177/1-553 HSKLEEARHL SIVDQDLEYL SEGLEGRSSN PVAVLFDTLL HPDADFGYDY ENSTTRP00000012431/1-507 HSKLKEARHL SIVDQDLEYL SEGLEGRSSN PVAVLFDALL HPDADFGYDY bmy_08038T0/1-544 HSKLEEARHL SIVDQDLEYL SEGLEGRSSN PVAVLFDALL HPDADFGYDY BACU009431/1-507 HSKLEEARHL SIVDQDLEYL SEGLEGRSSN PVAVLFDALL HPDADFGYDY 151 200 ENSP00000396445/1-549 PSVLHWKLEQ HHYIPHVVLG KGPPGGAWHN MEGSMLTISF GSWMELPGLK ENSBTAP00000018177/1-553 PSVLHWKLEQ HHYIPHLVLG KGPPGGAWHN MEGSMLTISF GNWMELPGLK ENSTTRP00000012431/1-507 PSILHWKLEQ HHYIPHLVLG KGPPGGAWHN MEGSMLTISF GNWMELPGLK bmy_08038T0/1-544 PSILHWKLEQ HHYIPHLVLG KGPPGGAWHN MEGSMLTISF GNWMELPGLK BACU009431/1-507 PSILHWKLEQ HHYIPHLVLG KGPPGGAWHN MEGSMLTISF GNWMELPGLK 201 250 ENSP00000396445/1-549 FKDWVSSKRR SLKGDRVMPE EIARYYKHYV KVMGLQKNFR ENTYITSVSR ENSBTAP00000018177/1-553 FKDWVSSKRR NLKGDRVMPE EIARYYKHYV KVMGLQKNFR ENTYITSVSR ENSTTRP00000012431/1-507 FKDWVSSKRR NLKGDRVMPE EIARYYKHYV KVMGLQKNFR ENTYITSVSR bmy_08038T0/1-544 FKDWVSSKRR NLKGDRVMPE EIARYYKHYV KVMGLQKNFR KNTYITSVSR BACU009431/1-507 FKDWVSSKRR NLKGDRVMPE EIARYYKHYV KVMGLQKNFR ENTYITSVSR 251 300 ENSP00000396445/1-549 LYRDQDDDDI QDRDISTKHL QIEKSNFIKR NWEIRGYQRI ADGSHVPFCL ENSBTAP00000018177/1-553 LYRDQVDNDG QGRNISTQHL QIEKSKFAKR NWEIRGYQRV GDGSHIPFCL ENSTTRP00000012431/1-507 LYRDQVDNDG QDRDISTQHL QIEKSKFTKR NWEIRGYQRI RDGSHIPFCL bmy_08038T0/1-544 LYRDQVDNDG QDRDISTQHL QIEKSKFTKR NWEIRGYQRI GDGSHIPFCL BACU009431/1-507 LYRDQVDNDG QDRDISTQHL QIEKSKFTKR NWEIRGYQRI GDGSHIPFCL 301 350 ENSP00000396445/1-549 FAENVALATG TLDSPAHLEI EGEDFPFVFH SMPEFGAAIN KGKLRGKVDP ENSBTAP00000018177/1-553 FAENVALATG TLDSPGRLEI EGEDFPFVFH SMPEFGAAVS KGKLRGKVDP ENSTTRP00000012431/1-507 FAENVALATG TLDSPGRLEI DGEDFPFVFH SMPEFGAAIS KGQLCGKVDP bmy_08038T0/1-544 FAENVALATG TLDSPGRLEI DGEDFPFVFH SMPEFGAAIS KGKLCGKVDP BACU009431/1-507 FAENVALATG TLDSPGRLEI DGEDFPFVFH SMPEFGAAIS KGKLCGKVDP 351 400 ENSP00000396445/1-549 VLIVGSGLTA ADAVLCAYNS NIPVIHVFRR RVTDPSLIFK QLPKKLYPEY ENSBTAP00000018177/1-553 VLIVGSGLTA ADAVLCAYNN NVPVIHVFRR RVTDPDLIFK QLPKKLYPEY ENSTTRP00000012431/1-507 VLIVGSGLTA ADAVLCAYNN NVPVIHVFRR RVTDPSLIFK QLPKKLYPEY bmy_08038T0/1-544 VLIVGSGLTA ADAVLCAYNN NVPVIHVFRR RVTDPSLIFK QLPKKLYPEY BACU009431/1-507 VLIVGSGLTA ADAVLCAYNN NVPVIHVFRR RVTDPSLIFK QLPKKLYPEY 401 450 ENSP00000396445/1-549 HKVYHMMCTQ SYSVDSNLLS DYTSFPEHRV LSFKSDMKCV LQSVSGLKKI ENSBTAP00000018177/1-553 HKVYHMMCTQ SYSLDSDLLS AYTSFPEHHV LAFKSDMKCI LQSISGLKKI ENSTTRP00000012431/1-507 HKVYHMMCTQ SYSLDSNLLS DYTSFPEHHV LSFKSDMKCI LQNISGLKKI bmy_08038T0/1-544 HKVYHMMCTQ SYSLDSNLLS DYTSFPEHHV LSFKSDMKCI LQNISGLKKI BACU009431/1-507 HKVYHMMCTQ SYSLDSNLLS DYTSFPEHHV LSFKSDMKCI LQNISGLKKI 451 500 ENSP00000396445/1-549 FKLSAAVVLI GSHPNLSFLK DQGCYLGHKS SQPITCKGNP VEIDTYTYEC ENSBTAP00000018177/1-553 FRLSAAVVLI GSHPNLSFLK EQGCYLGHNS SLPITCKGNP VEIDAYTYEC ENSTTRP00000012431/1-507 FKLSAAVVLI GSHPNLSFLK EQGCYLGHNS SQPITCKGNP VEIDAYTYEC bmy_08038T0/1-544 FKLSAAVVLI GSHPNLSFLK EQGCYLGHNS SQPITCKGNP VEIDAYTYEC BACU009431/1-507 FKLSAAVVLI GSHPNLSFLK EQGCYLGHNS SQPITCKGNP VEIDAYTYEC 501 550 ENSP00000396445/1-549 IKEANLFALG PLVGDNFVRF LKGGALGVTR CLATRQKKK- -HLFVERGGG ENSBTAP00000018177/1-553 VKEANLFALG PLVGDNFVRF LKGGALGVTR CLAIRQKKKK -HLFVERGGG ENSTTRP00000012431/1-507 VKEANLFALG PLVGDNFVRF LKGGALGVTR CLATRQKKKK QHLFVERGGG bmy_08038T0/1-544 VKEANLFALG PLVGDNFVRF LKGGALGVTR CLATRQKKKK QHLFVERGGG BACU009431/1-507 VKEANLFALG PLVGDNFVRF LKGGALGVTR CLATRQKKKK QHLFVERGGG 551 600 ENSP00000396445/1-549 DGIA ENSBTAP00000018177/1-553 DGIV ENSTTRP00000012431/1-507 DGIA bmy_08038T0/1-544 DGIA BACU009431/1-507 DGIA