KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:03:54 2014 Check: 00 .. Name: ENSP00000302770/1-475 Len: 488 Check: 6095 Weight: 1.00 Name: ENSBTAP00000018207/1-485 Len: 488 Check: 2531 Weight: 1.00 Name: bmy_15584T0/1-474 Len: 488 Check: 8335 Weight: 1.00 Name: BACU002099/1-434 Len: 488 Check: 5938 Weight: 1.00 // 1 50 ENSP00000302770/1-475 MSRRKAGSAP RRVEPAPAAN PDDEMEMQDL VIELKPEPDA QPQQAPRLGP ENSBTAP00000018207/1-485 MSRRKAGCMP RRIEPPPAAS SDDEMEMRDL VIDVKPEPDP RPLQAPGLGP bmy_15584T0/1-474 MSRRKAGCMP RRREPAPAAN SDDEMEMPDL FIDVKPEPDP RPLQARRLGP BACU002099/1-434 MSRRKAGCMP RRREPAPAAN SDDEMEMPDL FIDVKPEPDP RLLQARRLGP 51 100 ENSP00000302770/1-475 FSPKEVSSAG RFGGEPHHSP GPMPAGAALL ALGPRNPWTL WTPLTPN--- ENSBTAP00000018207/1-485 FTPKEVPAPE RFESEPRHCA GPVSTGGLIH ALGLRNQWNP QAPSWPHPTL bmy_15584T0/1-474 FNPKEMPAPG RFEGEPRHSP GPVPAGGLFH ALGLRNQWAP WTPLTPN--- BACU002099/1-434 FNPKEMPAPG RPPFDLRVFP LPR------- --------NP QAPSWPHPTL 101 150 ENSP00000302770/1-475 -----YPDRQ PWTDKHPDLL TCGRCLQTFP LEAITAFMDH KKLGCQLFRG ENSBTAP00000018207/1-485 TTRFLPADRQ PWTDKHPDLL TCGRCMQTFP LEAITAFVDH KKLGCQLFRG bmy_15584T0/1-474 -----LHDRQ PWTDKHPDLL TCGRCLQTFP LEAITAFMDH KKLGCQLFRG BACU002099/1-434 TTRFLPADRQ PWTDKHPDLL TCGRCLQTFP LEAITAFMDH KKLGCQLFRG 151 200 ENSP00000302770/1-475 PSRGQGSERE ELKALSCLRC GKQFTVAWKL LRHAQWDHGL SIYQTESEAP ENSBTAP00000018207/1-485 PSPCQGSEHE DLKALNCLRC GRQFTGAWKL LRHAQWDHGL SIYQTEPESP bmy_15584T0/1-474 PSPCHGSERE DLKALSCLRC GRQFTGAWKL LRHAQWDHGL SIYQTEPEAP BACU002099/1-434 PSPCHGSERE DLKALSCLRC GRQFTGAWKL LRHAQWDHGL SIYQTEPEAP 201 250 ENSP00000302770/1-475 EAPLLGLAEV AAAVSA---V VGPAAEAKSP RASGSGLTRR SPTCPVCKKT ENSBTAP00000018207/1-485 EAPLLGLAEV AVAVSAVSSV VGPEAEVKGS RV---GPTRR SPTCPVCKKT bmy_15584T0/1-474 EAPLLGLAEV AAAVSA---V AGPEAEAKGP RL---GPARR SPTCPVCKKT BACU002099/1-434 EPPLLGLAEV AAAVSA---V AGPEAEAKGP RL---GPARR SPTCPVCKKT 251 300 ENSP00000302770/1-475 LSSFSNLKVH MRSHTGERPY ACDQCPYACA QSSKLNRHKK THRQVPPQSP ENSBTAP00000018207/1-485 LSSFSNLKVH MRSHTGERPY ACDQCPYACA QSSKLNRHKK THRQLQPQSP bmy_15584T0/1-474 LSSFSNLKVH MRSHTGERPY ACDQCPYACA QSSKLNRHKK THRQLRPQSP BACU002099/1-434 LSSFSNLKVH MRSHTGERPY ACDQCPYACA QSSKLNRHKK THRQLRPQSP 301 350 ENSP00000302770/1-475 LMADTSQEQA SAAPPEPAVH AAAPTSTLPC SGGEGAGAAA TAGVQEPGAP ENSBTAP00000018207/1-485 CLADTGQEQA STAPPEPAAH AAAPASVLPC RGGEGAGAAA TAGVQEPGAP bmy_15584T0/1-474 CVADASQEQA SAAPPEPAAH AAAPASILPC SGGEGAGAAA TAGVQEPGAP BACU002099/1-434 CVADASQEQA SAAPPEPAAH AAAPASILP- ---------- ---------- 351 400 ENSP00000302770/1-475 GSGAQAGPGG DTWGAITTEQ RTDPANSQKA SPKKMPKSGG KSRG--PGGS ENSBTAP00000018207/1-485 GGGAQVGPGG DSWGADTKER RTDQEKNQKM SPKKTLKPAG KNRGPGPGGS bmy_15584T0/1-474 GGGAQAGPGV DSWGADTKEQ RTDPEKNQKT SPKKTLKPAG KSRGPGPGGS BACU002099/1-434 ---------- --WGADTKEQ RTDPKKNQKT SPKKTLKPAG KSRGPGPGGS 401 450 ENSP00000302770/1-475 CEFCGKHFTN SSNLTVHRRS HTGERPYTCE FCNYACAQSS KLNRHRRMHG ENSBTAP00000018207/1-485 CEFCGKHFTN SSNLTVHRRS HTGERPYACE LCSYACAQSS KLNRHRRMHG bmy_15584T0/1-474 CEFCGKHFTN SSNLTVHRRS HTGERPYACE LCSYACAQSS KLNRHRRMHG BACU002099/1-434 CEFCGKHFTN SSNLTVHRRS HTGERPYACE LCSYACAQSS KLNRHRRMHG 451 500 ENSP00000302770/1-475 MTPGSTRFEC PHCHVPFGLR ATLDKHLRQK HPEAAGEA ENSBTAP00000018207/1-485 LGPGGPRFAC PHCCVPFGLR ATLDKHLRQK HPEMAGEA bmy_15584T0/1-474 LGPGGPRFKC PHCCVPFGLR ATLDKHLRQK HPDVVGDA BACU002099/1-434 LGPGGPRFKC PHCCVPFGLR ATLDKHLRQK HPDVVGDA