KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:54 2014 Check: 00 .. Name: ENSP00000222990/1-465 Len: 602 Check: 993 Weight: 1.00 Name: BACU005495/1-549 Len: 602 Check: 8531 Weight: 1.00 Name: ENSBTAP00000018213/1-459 Len: 602 Check: 7559 Weight: 1.00 Name: ENSTTRP00000010143/1-457 Len: 602 Check: 1250 Weight: 1.00 Name: bmy_17113T0/1-277 Len: 602 Check: 7967 Weight: 1.00 // 1 50 ENSP00000222990/1-465 MTGRAMDPLP AAAVGAAAEA EADEEADPPA SDLPTPQAIE PQAIVQQVPA BACU005495/1-549 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018213/1-459 MTGGAMDPLP TAPGAAAAEA EVDEEADPPA ADSPVPPVSE PRA-----PD ENSTTRP00000010143/1-457 MTGGAMDPIP AAPAAAAAEP EADEEADPPA ADSPVPQVSE PKA-----PD bmy_17113T0/1-277 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000222990/1-465 PSRMQMPQGN PLLLSHTLQE LLARDTVQVE LIPEKKGLFL KHVEYEVSSQ BACU005495/1-549 ---MQMPPGN PLLLSLTLQE LLARDAVQVE LIPEKKGLFL KHVEYEVSSQ ENSBTAP00000018213/1-459 AGQMQVPPGN PLLLSLTLQE LLARDAVQVE LVPEKKGLFL KHVEYEVSSQ ENSTTRP00000010143/1-457 SSRMQMPPGN PLLLSLTLQE LLARDAV-VE LIPEKKGLFQ -HVEYEVSSQ bmy_17113T0/1-277 ---MQMPPGN PLLLSLTLPE LLARDAVQVE LIPEKKGLFL KHVEYEVSSQ 101 150 ENSP00000222990/1-465 RFKSSVYRRY NDFVVFQEML LHKFPYRMVP ALPPKRMLGA DREFIEARRR BACU005495/1-549 RFGSCVYRRY NDFVVFHETL LQKFPYRMVP ALPPKRMLGA DREFIEARRR ENSBTAP00000018213/1-459 RFKSCVYRRY NDFVVFHETL LHKFPYRMVP ALPPKRMLGA DREFIEARRR ENSTTRP00000010143/1-457 RFKSCVYRRY NDFVVFHEML LQKFPYRMVP ALPPKRMLGA DREFIEARRR bmy_17113T0/1-277 RFKSCVYRRY NDFVVFHEAL LQKFPYRMVP ALPPKRMLGA DREFIEARRR 151 200 ENSP00000222990/1-465 ALKRFVNLVA RHPLFSEDVV LKLFLSFSGS DVQNKLKESA QCVGDEFLNC BACU005495/1-549 ALKRFINLVA RHPPFSEDVV LKLFLSFSGP DVQNKLKESA QCVGDEFMNC ENSBTAP00000018213/1-459 ALKRFINLVA RHPPFSEDTI LKLFLSFSGP DVQNKLKESA QCLGDEFMNC ENSTTRP00000010143/1-457 ALKRFINLVA RHPPFSEDVV LKLFLSFSGP DVQNKLKECA QCVGDEFMNC bmy_17113T0/1-277 ALKRFINLVA RHPPFSEDVV LKLFLSFSGP DVQNKLKESA QCVGDEFMNC 201 250 ENSP00000222990/1-465 KLATRAKDFL PADIQAQFAI SRELIRNIYN SFHKLRDRAE RIASRAIDNA BACU005495/1-549 KLAARAKDFL PADIQTQFAI SRELIRNIYN SFHKLRDRAE RMVSRAIDNA ENSBTAP00000018213/1-459 RLAARAKDFL PADIQTQFAM SRELIRNIYN SFHKLRDRAE RMVSRAIDNA ENSTTRP00000010143/1-457 KLAARAKDFL PADIQTQFAI SRELIRNIYN SFHKLRDRAE RMVSRTIDNA bmy_17113T0/1-277 KLAARAKDFL PADIQTQFAI SRELIRNIYN SFHKLRDRAE RMVSRAIDNA 251 300 ENSP00000222990/1-465 ADLLIFGKEL ---------S AIGSDTTPLP SWAALNSSTW GSLKQALKGL BACU005495/1-549 ADLLIFGKEL RQVTLVGSVG ALGSDTTPLP SWATLNSSTW GSLKQALKGL ENSBTAP00000018213/1-459 ADLLIFGKEL ---------S ALGSDTTPLP SWASLNSSTW GSLKQALKGL ENSTTRP00000010143/1-457 ADLLIFGKEL ---------S ALGSDTTPLP SWATLNSSTW GSLKQALKGL bmy_17113T0/1-277 ADLLIFGKEL ---------S ALGSDTTPLP SWATLNSSMW GSLKQALKGL 301 350 ENSP00000222990/1-465 SVEFALLADK AAQQ------ ---------- ---------- ---------- BACU005495/1-549 SVEFALLADK AAQQVTWRGY TEQGGNPKSI ISSVFSDSDL DAASALKRGE ENSBTAP00000018213/1-459 SVEFALLADK AAQQ------ ---------- ---------- ---------- ENSTTRP00000010143/1-457 SVEFALLADK AAQQ------ ---------- ---------- ---------- bmy_17113T0/1-277 SVEFALLADK AAQQ------ ---------- ---------- ---------- 351 400 ENSP00000222990/1-465 ---------- ---------- ---------- ---------- ---------- BACU005495/1-549 GRQASHVVQF EVPPASEVPH KCCFAMSRLR GTDSGPRAAQ PRALAPTPPA ENSBTAP00000018213/1-459 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010143/1-457 ---------- ---------- ---------- ---------- ---------- bmy_17113T0/1-277 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000222990/1-465 ---------- ---------- ---------- GKQEENDVVE KLNLFLDLLQ BACU005495/1-549 RERLRASVPT GRVDVARPCE QPWATRLAGA GRQEENDVVE KLNLFLDLLQ ENSBTAP00000018213/1-459 ---------- ---------- ---------- GKQEENDVVE KLNLFLDLLQ ENSTTRP00000010143/1-457 ---------- ---------- ---------- GKQEENDVVE KLNLFLDLLQ bmy_17113T0/1-277 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000222990/1-465 SYKDLCERHE KGVLHKHQRA LHKYSLMKRQ MMSATAQNRE PESVEQLESR BACU005495/1-549 SYKGLCERHE KGVLHKHQRA LHKYSLMKRQ MTSAAAQNRE PECVEQLESR ENSBTAP00000018213/1-459 SYKDLCERHE KGVLHKHQRA LHKYSLMKRQ MVSAAVQSRE PESMEQLESR ENSTTRP00000010143/1-457 SYKDLCERHE KGVLHKHQRA LHKYSLMKRQ LMSAAVQNRE PESVEQLESR bmy_17113T0/1-277 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000222990/1-465 IVEQENAIQT MELRNYFSLY CLHQETQLIH VYLPLTSHIL RAFVNSQIQG BACU005495/1-549 IVEQENVIQT MELRNHFSLY CLHQETQLVH VYLPLTSHIL GAFVSSQIQG ENSBTAP00000018213/1-459 IVQQENVIQT MELRSHFSLY CLHQETQLVH VYLPLTSHIL GAFVNSQIQG ENSTTRP00000010143/1-457 IVEQENVIQT MELRNYFSLY CLHQETQLVH VYLPLTSHIL GAFVSSQIQG bmy_17113T0/1-277 ---------- ---------- ---------- --------VS GFVLRGACSG 551 600 ENSP00000222990/1-465 HKEMSKVWND LR------PK LSCLFAGPHS TLTPPCSPPE DGLCPH---- BACU005495/1-549 HKECPYLTSG IEYDPCSLPR PARGFGGNGL LSRRSVPGSV AVLGTHLPRS ENSBTAP00000018213/1-459 HKEMSKVWND LQ------PK LRCLFVGPHG APAPPRP-PQ DGLSAH---- ENSTTRP00000010143/1-457 HKEXXXXXXX XX------XX XXXXXXXXXX XXXXXXS-PQ DGLSPH---- bmy_17113T0/1-277 EHSMPWCA-- ---------- ---------- ---------- -GASSS---- 601 650 ENSP00000222990/1-465 -- BACU005495/1-549 RP ENSBTAP00000018213/1-459 -- ENSTTRP00000010143/1-457 -- bmy_17113T0/1-277 --