KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:57 2014 Check: 00 .. Name: ENSTTRP00000009373/1-778 Len: 786 Check: 8308 Weight: 1.00 Name: ENSP00000253699/1-784 Len: 786 Check: 5652 Weight: 1.00 Name: ENSBTAP00000018238/1-783 Len: 786 Check: 9859 Weight: 1.00 Name: bmy_16385T0/1-773 Len: 786 Check: 9629 Weight: 1.00 Name: BACU015197/1-784 Len: 786 Check: 3214 Weight: 1.00 // 1 50 ENSTTRP00000009373/1-778 MASLDDPGEV REGFLCPLCL KDLQSFYQLQ SHYEEEHSGE DRDVKGQIKS ENSP00000253699/1-784 MASLDDPGEV REGFLCPLCL KDLQSFYQLH SHYEEEHSGE DRDVKGQIKS ENSBTAP00000018238/1-783 MASLDDPGEV REGFLCPLCL KDLQSFYQLQ SHYEEEHSGE DRDVKGQIKS bmy_16385T0/1-773 MASLDDPGEV REGFLCPLCL KDLQSFYQLQ SHYEEEHSGE DRDVKGQIKS BACU015197/1-784 MASLDDPGEV REGFLCPLCL KDLQSFYQLQ SHYEEEHSGE DRDVKGQIKS 51 100 ENSTTRP00000009373/1-778 LVQKARKAKN RLLKREGDDR AESGTQGYES FSYGGVDPYM WEPQELGAVR ENSP00000253699/1-784 LVQKAKKAKD RLLKREGDDR AESGTQGYES FSYGGVDPYM WEPQELGAVR ENSBTAP00000018238/1-783 LVQKARKAKN RLLKREGDDR AESGTQGYES FSYGGVDPYM WEPQELGAMR bmy_16385T0/1-773 LVQKARKAKN RLLKREGDDR AESGTQGYES FSYGGVDPYI ---------- BACU015197/1-784 LVQKARKAKN RLLKREGDDR AESGTQGYES FSYGGVDPYM WEPQELGAVR 101 150 ENSTTRP00000009373/1-778 SHLSDFKKHR AARIDHYVVE VNKLIIRLEK LTAFDRTNTE SAKIRAIEKS ENSP00000253699/1-784 SHLSDFKKHR AARIDHYVVE VNKLIIRLEK LTAFDRTNTE SAKIRAIEKS ENSBTAP00000018238/1-783 SHLSDFKKHR AARIDHYVVE VNKLIIRLEK LTAFDRTNTE SAKIRAIEKS bmy_16385T0/1-773 -HLSDFKKHR AARIDHYVIE VNKLIIRLEK LTAFDRTNTE SAKIRAIEKS BACU015197/1-784 SHLSDFKKHR AARIDHYVVE VNKLIIRLEK LTAFDRTNTE SAKIRAIEKS 151 200 ENSTTRP00000009373/1-778 VVPWVNDQDV PFCPDCGNKF SIRNRRHHCR LCGSIMCKKC MELISLPLAN ENSP00000253699/1-784 VVPWVNDQDV PFCPDCGNKF SIRNRRHHCR LCGSIMCKKC MELISLPLAN ENSBTAP00000018238/1-783 VVPWVNDQDV PFCPDCGNKF SIRNRRHHCR LCGSIMCKKC MELISLPLAN bmy_16385T0/1-773 VVPWVNDQDV PFCPDCGNKF SIRNRRHHCR LCGSIMCKKC MELISLPLAN BACU015197/1-784 VVPWVNDQDV PFCPDCGNKF SIRNRRHHCR LCGSIMCKKC MELISLPLAN 201 250 ENSTTRP00000009373/1-778 KLTSASKDSL STHTSPSQSP NSVHGSRRAS ISSVSSVSSV LDEKDDDRIR ENSP00000253699/1-784 KLTSASKESL STHTSPSQSP NSVHGSRRGS ISSMSSVSSV LDEKDDDRIR ENSBTAP00000018238/1-783 KLTSASKDSL SAHTSPSQSP NSVHGSRRGS ISSVSSVSSV LDEKDDDRIR bmy_16385T0/1-773 KLTSASKDSL STHTSPSQSP NSVHGSRRAS ISSVSSASSV LDEKDDDRIR BACU015197/1-784 KLTSASKDSL STHTSPSQSP NSVHGSRRAS ISSVSSVSSV LDEKDDDRIR 251 300 ENSTTRP00000009373/1-778 CCTHCKDTLL KREQQIDEKE HTPDIVKLYE KLRLCMEKVD QKAPEYIRMA ENSP00000253699/1-784 CCTHCKDTLL KREQQIDEKE HTPDIVKLYE KLRLCMEKVD QKAPEYIRMA ENSBTAP00000018238/1-783 CCTHCKDTLL KREQQIDEKE RTPDIVRLYE KLRLCMEKVD QKAPEYIKMA bmy_16385T0/1-773 CCTHCKDTLL KREQQIDEKE HTPDIVKLYE KLQLCMEKVD QKAPEYIRMA BACU015197/1-784 CCTHCKDTLL KREQQIDEKE HTPDIVKLYE KLRLCMEKVD QKAPEYIRMA 301 350 ENSTTRP00000009373/1-778 ASLNAGETTY SLEHANDLRV EVQKVYELID ALSKKILTLD LKQDPPPHPN ENSP00000253699/1-784 ASLNAGETTY SLEHASDLRV EVQKVYELID ALSKKILTLG LNQDPPPHPS ENSBTAP00000018238/1-783 ASLNAGETTY SLEHAGDLRV EVQKVYELID ALSKKILTLD MKQDPPPHPN bmy_16385T0/1-773 ASLNAGETTY SLEHANDLRV EVQKVYELID ALSKKILTLD LKQDPPPHPN BACU015197/1-784 ASLNAGETTY NLEHANDLRV EVQKVYELID ALSKKILTLD LKQDPPPHPN 351 400 ENSTTRP00000009373/1-778 TLRLQRMIRY SATLFVQEKL LGLMSLPTKE QFEELKKKRK QEVERKKILE ENSP00000253699/1-784 NLRLQRMIRY SATLFVQEKL LGLMSLPTKE QFEELKKKRK EEMERKRAVE ENSBTAP00000018238/1-783 TLRLQRMIRY SATLFVQEKL LGLMSLPTKE QFEELKQKRK QEMEQKRILE bmy_16385T0/1-773 TLRLQRMIRY SATLFVQEKL LGLMSLPTKE QFEELKKKRK QEVERKKILE BACU015197/1-784 TLRLQRMIRY SATLFVQEKL LGLMSLPTKE QFEELKKKRK QEVERKKILE 401 450 ENSTTRP00000009373/1-778 RRAALESQRR LEERRSDLVS HATNGEVVSL RGGHAPLRKA EGWLPLSGGQ ENSP00000253699/1-784 RQAALESQRR LEERQSGLAS RAANGEVASL RRGPAPLRKA EGWLPLSGGQ ENSBTAP00000018238/1-783 RQAALESQRR LEERRSDLAS RATNGEVAPP RRGPAPLRKA EGWLPLSEGQ bmy_16385T0/1-773 RRAALESQRR LEEXRSDLVS HATNGEVVSL RGGPAPLRKA EGWLPLSGGQ BACU015197/1-784 RRAALESQRR LEERHSDLVS HATNGEVVSL RGGPAPLRKA EGWLPLSGGQ 451 500 ENSTTRP00000009373/1-778 GQVEDSDPLL QQIHNIT-FI ---QLDGRMD -VRTLQ-RLR QLQDEYDXXX ENSP00000253699/1-784 GQSEDSDPLL QQIHNITSFI RQAKAAGRMD EVRTLQENLR QLQDEYDQQQ ENSBTAP00000018238/1-783 RQSEDPDPLL QQIHNITSFI RQAKAAGRTD EVRTLQENLR QLQDEYDQQQ bmy_16385T0/1-773 GQIEDSDPLL QQIHNITSFI RQAKAAGRMD EVRTLQENLR QLQDEYDQQQ BACU015197/1-784 GQIEDSDPLL QQIHNITSFI RQAKAAGRMD EVRTLQENLR QLQDEYDQQQ 501 550 ENSTTRP00000009373/1-778 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000253699/1-784 TEKAIELSRR QAEEEDLQRE QLQMLREREL EREREQFRVA SLHTRTRSLD ENSBTAP00000018238/1-783 TEKAIALSRR QAEEEDLQRE QLQVLRER-- EREREQGQAA SLHTRTRSLD bmy_16385T0/1-773 TEKAIELSRR QAEEEDLQRE QLQMLRERER EREREQFQAA SLHMRTRSLD BACU015197/1-784 TEKAIELSRR QAEEEDLQRE QLQMLRERER EREREQFQAA SLHTRTRSLD 551 600 ENSTTRP00000009373/1-778 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXSAAPKTPS PSSALEPIRL ENSP00000253699/1-784 FREIGPFQLE PSREPRTHLA YALDLGSSPV PSSTAPKTPS LSST-QPTRV ENSBTAP00000018238/1-783 FREIRPFQLE PSREPRTHLA HALDLGSSPA RSGTATKTSP PSSAPEPFRG bmy_16385T0/1-773 FREIRPFQLE PGREPRDHLA HALDLGCSPA QSSAAPKTPS PSSALEPIRV BACU015197/1-784 FREIRPFQLE PGREPRDHLA HALDLGCSPA QSSAAPKTPS PSSALEPIRV 601 650 ENSTTRP00000009373/1-778 WSGPPALGQE FFPQSTTSQH NEVPSLNPFD -EEDLSSPAA EGTASPPAAE ENSP00000253699/1-784 WSGPPAVGQE RLPQSSMPQQ HEGPSLNPFD -EEDLSSPME EATTGPPAAG ENSBTAP00000018238/1-783 WSGPPALGQE FLPQSTASPR SEAPSLNPFD EEEDLASPSA EDTANPPAPE bmy_16385T0/1-773 WSGPPALDQE FLPQSTTSQH NEVPSLNPFD -EEDLSSPAA EGTASPPAAE BACU015197/1-784 WSGPPALDQE FFPQSTTSQH NEVPSLNPFD -EEDLSSPAA EGTASRPAAE 651 700 ENSTTRP00000009373/1-778 PPLGPPACVL KEYNPFEEE- EEEEAVAGNP FTSPDSPAPS PFDEEDGHPP ENSP00000253699/1-784 VSLDPSARIL KEYNPFEEED EEEEAVAGNP FIQPDSPAPN PFSEEDEHPQ ENSBTAP00000018238/1-783 PSLGPPACVL REYNPFEEE- DEEDAVAGNP FTKPDGPAPN PFEEEDEHPP bmy_16385T0/1-773 PSLGPPACVL KEYNPFEEE- EEEEAVAGNP FTSPDSPAPS PFDEEDGHPH BACU015197/1-784 PSLGPPACVL KEYNPFEEE- EEEEAVAGNP FTSPDSPAPS PFDEEDGHPH 701 750 ENSTTRP00000009373/1-778 QRPSGPPVPG SPFEEAPCTN PFEMDSESGQ EGEEPIEEEL LLQQIDNIKA ENSP00000253699/1-784 QRLSSPLVPG NPFEEPTCIN PFEMDSDSGP EAEEPIEEEL LLQQIDNIKA ENSBTAP00000018238/1-783 RTPASPPVPG NPFEEAPCTN PFEEESDGGQ EGAEPIEEEL LLQQIDNIKA bmy_16385T0/1-773 QRPSGPPVPG NPFEEAPCTN PFKVDSESGQ EGEDPIEEEL LLQQIDNIKA BACU015197/1-784 QRPSGPPVPG NPFEEAPCTN PFEVDSESGQ EGEEPIEEEL LLQQIDNIKA 751 800 ENSTTRP00000009373/1-778 YIFDAKQCGR LDEVEVLTEN LRELKHTLAK QKRGAD ENSP00000253699/1-784 YIFDAKQCGR LDEVEVLTEN LRELKHTLAK QKGGTD ENSBTAP00000018238/1-783 YIFDAKQCGR LDEVEVLTEN LRELRRTLAR QKGGTD bmy_16385T0/1-773 YIFDAKQCGR LDEVEVLTEN LRELKHTLAK QKGDAD BACU015197/1-784 YIFDAKQCGR LDEVEVLTEN LRELKHTLAK QKGGAD