KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:03:59 2014 Check: 00 .. Name: ENSP00000355560/1-527 Len: 927 Check: 5156 Weight: 1.00 Name: ENSBTAP00000018249/1-528 Len: 927 Check: 5220 Weight: 1.00 Name: BACU003376/1-386 Len: 927 Check: 7112 Weight: 1.00 Name: bmy_09327T0/1-865 Len: 927 Check: 8760 Weight: 1.00 Name: ENSTTRP00000007344/1-528 Len: 927 Check: 5967 Weight: 1.00 // 1 50 ENSP00000355560/1-527 MSDTLTADVI GRRVEVNGEH ATVRFAGVVP PVAGPWLGVE WDNPERGKHD ENSBTAP00000018249/1-528 MNSTSTSDVI GRRVEVNGEH ATVRFSGLVP PVAGLWLGVE WDNPERGKHD BACU003376/1-386 ---------- ---------- ---------- -LPGLWLGVE WDNPERGKHD bmy_09327T0/1-865 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007344/1-528 MNDTLTSDVI GRRVEVNGEH ATVRFSGVVP PMAGLWLGVE WDNPERGKHD 51 100 ENSP00000355560/1-527 GSHEGTVYFK CRHPTGGSFI RPNKVNFGTD FLTAIKNRYV LEDGPEEDRK ENSBTAP00000018249/1-528 GSHEGTVYFK CRHPTAGSFI RPHKVNFGVD FLTAIKNRYV LEDEPKEEET BACU003376/1-386 GSHEGTVYFK CRHPTGGSFI RPNKVNFGVD FLTAIKNRYA LEDEPEEEGK bmy_09327T0/1-865 ---------- --HPTGGSFI RPNKVNFGVD FLTAIKNRYA LEDEPEEEGK ENSTTRP00000007344/1-528 GSHEGTVYFK CRHPTGGSFI RPNKVNFGVD FLTAIKNRYA LEDEPEEEGK 101 150 ENSP00000355560/1-527 EQIVTIGNKP VETIGFDSIM KQQSQLSKLQ EVSLRNCAVS CAGEKGGVAE ENSBTAP00000018249/1-528 EQIVIIGNKP VETIGFDSVI KQQSQLSKLQ DVSLRNCAVN GAGDKGEIAK BACU003376/1-386 EQIVTIGNKP VETIGFDSVV KQQSQLSKLQ EVSLRNCAVN GPGDKGGIAK bmy_09327T0/1-865 EQIVTIGNKP VETIGFDSVV KQQSQLSKLQ EVSLRNCAVN GPGDKGGIAK ENSTTRP00000007344/1-528 EQIVTIGNKP VETIGFDSVV KQQSQLSKLQ EVSLRNCTVN GPGDKGGIAK 151 200 ENSP00000355560/1-527 ACPNIRKVDL SKNLLSSWDE VIHIADQLRH LEVLNVSENK LKFPSGS-VL ENSBTAP00000018249/1-528 ACPNIRSIDL SKNLLSSWEE VIDIADQLKH LEVLNLSENK LTSPSSSPSP BACU003376/1-386 ACPNLRSIDL SKNLLSSWDE VVDIADQLKH LEVLNL---- ----RCSAVP bmy_09327T0/1-865 ACPNVRSIDL SKNLLSSWDE VVDIADQLKH LEVLNLSENR LKFPSRSPSP ENSTTRP00000007344/1-528 ACPNVRSIDL SKNLLSSWDE VVDIADQLKH LEVLNLSENK LKFPSGSPSP 201 250 ENSP00000355560/1-527 TGTLSVLKVL VLNQTGITWA EVLRCVAGCP GLEELYLESN NIFISERPTD ENSBTAP00000018249/1-528 TGTFPTLKVL VLNRTGVTWA EVLRCASGWP VLEKLYLESN NIIISERPTD BACU003376/1-386 LG-------- ---------- ---------- ---------- --VLSLRNCT bmy_09327T0/1-865 TGTFAALKVL VLNRIGITWT EVLCCASGCP VLEKLYLESN SIVISERPTD ENSTTRP00000007344/1-528 TGTFSALKVL VLNRIGITWT EVLHCASRCP VLEKLYLESN GIVISERPTD 251 300 ENSP00000355560/1-527 VLQTVKLLDL SSNQLIDENQ LYLIAHLPRL EQLILSDTGI SSLHFPDAGI ENSBTAP00000018249/1-528 VLQTVKLLDL SSNQLIDENQ LFLIAYLPRL EQLILSDIGI SSIHFPDAGI BACU003376/1-386 LSPTVSSFQK ---------- ---------- ---------- ---------- bmy_09327T0/1-865 VLQTVKLLDL SSNQLIDENQ LFLIAYLPRL EQLILSDIGL SSIHFPDAGI ENSTTRP00000007344/1-528 VLQTVKLLDL SSNQLIDENQ LFLIAYLPRL EQLILSDIGL ASIHFPDAGI 301 350 ENSP00000355560/1-527 GCKTSMFPSL KYLVVNDNQI SQWSFFNELE KLPSLRALSC LRNPLTKEDK ENSBTAP00000018249/1-528 GCKTSMFPSL QYLVLNDNQI AQWSFMNELD KLQSLHALSC TRNPLTEGSK BACU003376/1-386 GCKTSMFPSL QYLVLNDNRI SQWSFFNELD KLQSLHTLSC ARNPLTESSK bmy_09327T0/1-865 GCKTSMFPSL QYLVLNDNRI SQWSFFNELD KLQSLHTLSC ARNPLTESSK ENSTTRP00000007344/1-528 GCKTSMFPSL QYLVLNDNRI SQWSSINELD KLQSLHALSC TRNPLTESSK 351 400 ENSP00000355560/1-527 EAETARLLII ASIGQLKTLN KCEILPEERR RAELDYRKAF GNEWKQAGGH ENSBTAP00000018249/1-528 DAQTTRQFII ARIGQLRTLN KCAIEPEERR GAELDYRKAF GNEWKKAGGH BACU003376/1-386 DAQTTRQFII ARIGQLRTLN KCAIQREERR GAELDYRKAF GNEWKKAGGH bmy_09327T0/1-865 DAQTTRQFIV ARIGQLKTLN KCAIQREERR GAELDYRKAF GNEWKKAGGH ENSTTRP00000007344/1-528 DAQTTRQFII ARIGQLRTLN KCAIQREERR GAELDYRKAF GNEWKKAGGH 401 450 ENSP00000355560/1-527 KDPEKNRLSE EFLTAHPRYQ FLCLKYGAPE DWELKTQQPL MLKNQLLTLK ENSBTAP00000018249/1-528 QDPEKNRPNE EFLAAHPRYQ ALCLKYGAPE DGELKTQQPF LLKNQLLTLK BACU003376/1-386 QDPDKNRPNE EFLAAHPRYQ SLC------- ---------- ------LTLK bmy_09327T0/1-865 QDPDKNRPNE EFLAAHPRYQ SLCLKYGAPE DGELKVQQPF LLKNQLLTLK ENSTTRP00000007344/1-528 QDPDKNRPNE EFLAAHPRYQ SLCLKYGAPE DGELKVQQPF LLKNQLLTLK 451 500 ENSP00000355560/1-527 IKYPHQLDQK VLEKQLPGSM TIQKVKGLLS RLLKVPVSDL LLSYESPKKP ENSBTAP00000018249/1-528 IKYPNQHDQK VIEKQLPDSM TVQKVKGLLS RLLKVPVSEL LLSYESPKMP BACU003376/1-386 IKHPNQLDQK VIEKRLPESM TIQKVKGLLS RLLKVPVSEL LLSYESPKMP bmy_09327T0/1-865 IKHPNQLDQK VIEKRLPESM TIQKVKGLLS RLLKVPVSEL LLSYESPKMP ENSTTRP00000007344/1-528 IKHPNQLDQK VIEKQLPESM TIQKVKGLLS RLLRVPVSEL LLSYESPKMP 501 550 ENSP00000355560/1-527 GREIELENDL KSLQFYSVEN GDCLLVRW-- ---------- ---------- ENSBTAP00000018249/1-528 GKEVELENDL QPLRFYSVEN GDCLLVRW-- ---------- ---------- BACU003376/1-386 GREIELENDQ QSLQFYSVEN GDCLLVRW-- ---------- ---------- bmy_09327T0/1-865 GREIELENDQ QSLQFYSVEN GDCLLVRWKF CANVKKYHIG WLNWWQRRGN ENSTTRP00000007344/1-528 GREIELENDQ QSLQFYSVEN GDCLLVRW-- ---------- ---------- 551 600 ENSP00000355560/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018249/1-528 ---------- ---------- ---------- ---------- ---------- BACU003376/1-386 ---------- ---------- ---------- ---------- ---------- bmy_09327T0/1-865 WRVEGPGVSV CLVQATPGDR RLTTPSYKAL CPWGPRASRV IQLLQVTFWK ENSTTRP00000007344/1-528 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000355560/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018249/1-528 ---------- ---------- ---------- ---------- ---------- BACU003376/1-386 ---------- ---------- ---------- ---------- ---------- bmy_09327T0/1-865 AQEGDFIYLD IKKYIMATRD KIDSLISHSQ SLYLFYPELA REPVRRQKFE ENSTTRP00000007344/1-528 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000355560/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018249/1-528 ---------- ---------- ---------- ---------- ---------- BACU003376/1-386 ---------- ---------- ---------- ---------- ---------- bmy_09327T0/1-865 LKKSGESFIR PQNGPGNYIH KGLMISHSAQ GKTEKKRRDR LGGSPSNKFP ENSTTRP00000007344/1-528 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000355560/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018249/1-528 ---------- ---------- ---------- ---------- ---------- BACU003376/1-386 ---------- ---------- ---------- ---------- ---------- bmy_09327T0/1-865 DKVLKKKRQR REYTLWWFDV DKLFLHQKKN KTIPTQHFYN LPFIEEHFDK ENSTTRP00000007344/1-528 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000355560/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018249/1-528 ---------- ---------- ---------- ---------- ---------- BACU003376/1-386 ---------- ---------- ---------- ---------- ---------- bmy_09327T0/1-865 CQPHPQTQYH HRGCFPPSVR HPPHGDYLYD QEVFEGENED FLREHHLLRR ENSTTRP00000007344/1-528 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000355560/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018249/1-528 ---------- ---------- ---------- ---------- ---------- BACU003376/1-386 ---------- ---------- ---------- ---------- ---------- bmy_09327T0/1-865 KRELKKKAIA NLRPRTCSNP ITSAGFSQLS QIRKFLKTKQ PQPIHILKLP ENSTTRP00000007344/1-528 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000355560/1-527 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018249/1-528 ---------- ---------- ---------- ---------- ---------- BACU003376/1-386 ---------- ---------- ---------- ---------- ---------- bmy_09327T0/1-865 VVASNRGVCP ILNPALLRKT PEDLPLRIRP LLSPSHCVPS GKLCPNSFIG ENSTTRP00000007344/1-528 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000355560/1-527 ---------- ---------- ------- ENSBTAP00000018249/1-528 ---------- ---------- ------- BACU003376/1-386 ---------- ---------- ------- bmy_09327T0/1-865 IHDLQSFEKP DDALLGTFAP LSDDQDK ENSTTRP00000007344/1-528 ---------- ---------- -------