KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:01 2014 Check: 00 .. Name: ENSP00000342681/1-495 Len: 510 Check: 5824 Weight: 1.00 Name: ENSBTAP00000018258/1-495 Len: 510 Check: 6469 Weight: 1.00 Name: ENSTTRP00000000037/1-492 Len: 510 Check: 4252 Weight: 1.00 Name: bmy_16547T0/1-483 Len: 510 Check: 4375 Weight: 1.00 Name: BACU005407/1-496 Len: 510 Check: 9972 Weight: 1.00 // 1 50 ENSP00000342681/1-495 MPMGSLQ-PL ATLYLLGMLV ASCLGRLS-- -WYDPDFQAR LTRSNSKCQG ENSBTAP00000018258/1-495 --MGSQHLPL AALYLLELLV TSCLGGLK-- -VEVQGLTMR LSGSGSRCQG ENSTTRP00000000037/1-492 APMGSRHPPL AALYLLGLLV TSCLRGLRGL NLX---XXXR LSGSGSRCQG bmy_16547T0/1-483 ---------- ---------- TSCLRGLRGL NLEDKGFTVR LSGSGSRCQG BACU005407/1-496 --MGSQHPPL AALYLLGLLV TSCLRGLRGF NLEDQGFTVR LSGSGSRCQG 51 100 ENSP00000342681/1-495 QLEVYLKDGW HMVCSQSWGR SSKQWEDPSQ ASKVCQRLNC GVPLSLGP-- ENSBTAP00000018258/1-495 RLEVSNGTEW YAVHSQSWGQ LSLYQVAPRQ FLKLCQELQC RDPLLLSSSR ENSTTRP00000000037/1-492 HLEVTLKDEW YTVHSQSWGL RPFHREDPGQ AWKLCQELRC REPLLLS--- bmy_16547T0/1-483 HLEVNYKDEW YTVNSQSWGL RPFHREDPGQ AWKLCQKLRC REPLLLSHFR BACU005407/1-496 HLEVNYKDEW YTVHSQSWGL RPFHREDPGQ AWKLCQKLRC REPLLLSHIR 101 150 ENSP00000342681/1-495 FLVTYTPQSS IICYGQLGSF SNCSHSRNDM CHSLGLTCLE PQKTTPPTTR ENSBTAP00000018258/1-495 YFKEVQFQKL IICHGQLGSF SNCSLNRGRQ VDSLALICLE PPRTTAPPTT ENSTTRP00000000037/1-492 HFVTSKPQSQ ITCRGQLGSF SNCSDSKANQ GDPLALICLE PLRTTPLPTS bmy_16547T0/1-483 HFKGKRPQSQ ITCRGQLGSF SNCSNSKANQ GDPLALICLE QERACCWSSA BACU005407/1-496 HFKGKRPQSQ ITCRGQLGSF SNCSDSKANQ GDPLSLICLE PLRTTPLPTS 151 200 ENSP00000342681/1-495 PPPTTTPEPT APPRLQLVAQ SGGQHCAGVV EFYSGSLGGT ISYEAQDKTQ ENSBTAP00000018258/1-495 SPPTTTPEPT APPRFQLVAE PGGLRCAGVV EFYSGGLGGT IGIEPQNDIK ENSTTRP00000000037/1-492 PPPITTPEPT APPRLQLVAR PGGLRCAGLV EFYSGSLGGT VGIESQDGIQ bmy_16547T0/1-483 LRSL--PTSP APPRLQLVAQ PGGLRCAGLV EFYSGSLGGT VGIESQDGIQ BACU005407/1-496 PPPVTTPEPT APPRLQLVAR PGGLRCAGLV EFYSGSLGGT VGIESQDGIQ 201 250 ENSP00000342681/1-495 DLENFLCNNL QCGSFLKHLP ETEAGRAQDP GEPREHQPLP IQWKIQNSSC ENSBTAP00000018258/1-495 DLGQLICAAL QCGSFLKPLP ETEEAQTQKP EGQR---PLP IRWEIQNPKC ENSTTRP00000000037/1-492 DLGNLICAAL QCGSFLRPLP ETEAARKLEP GESG---PLP IRWRIQNRRC bmy_16547T0/1-483 DLGNLICAAV QCGSFLKPLP ETEAARTLEP GESS---PLP IRWKIQNRRC BACU005407/1-496 DLGNLICAAL QCGSFLKPLP ETEAARTLEP GESG---PLP IRWKIQNRRC 251 300 ENSP00000342681/1-495 TSLEHCFRKI KPQKSGRVLA LLCSGFQPKV QSRLVGGSSI CEGTVEVRQG ENSBTAP00000018258/1-495 TSLEQCFRKV QPWVGGQALG LICSDFQPKV QSRLVGGSDV CEGSVEVRSG ENSTTRP00000000037/1-492 ATLEQCFRKV QPQAGGQALG LICSDFQPKV QSRLVGGSGT CEGSVEVRQG bmy_16547T0/1-483 ASVEQCFRKV QPQEGGQALG LICSDFQPKV QSRLVGGSGT CEGSVEVRQG BACU005407/1-496 ASVEQCFRKV QPQEGGQALG LICSDFQPKV QSRLVGGSGT CEGSVEVRQG 301 350 ENSP00000342681/1-495 A--QWAALCD SSSARSSLRW EEVCREQQCG SVNSYRVLDA GDPTSRGLFC ENSBTAP00000018258/1-495 KGQKWDTLCD DSWAKGTARW EEVCREQQCG NVSSYRGLDP SEKTLGGFYC ENSTTRP00000000037/1-492 K--QWDALCD SSSAKGMARW EDVCREQQCG NVSSYQLLDT GEKTSGGFFC bmy_16547T0/1-483 K--QWDALCD SSSAKGVARW EDVCQEQQCG NVSSYQLLDT GEKTSGGFFC BACU005407/1-496 K--QWDALCD SPSVKGVARW EDVCQEQQCG NVSSYQLLDT GEKTSGGFFC 351 400 ENSP00000342681/1-495 PHQKLSQCHE LWERNSYCKK VFVTC----- --QDPNPAGL AAGTVASIIL ENSBTAP00000018258/1-495 PPGILSRCHK LEEKKSHCKR VFVTC----- --QNSSRAGL GAGAVMSIIL ENSTTRP00000000037/1-492 PPGKLSQCHQ LLQKKSHCKR VFVTC----- --QNTRPAGL GAGTVASVIL bmy_16547T0/1-483 PPGKLSQCHQ LLQKKSHCKR VFVTCELGPA HGQNSSPAGL GAGTVTSIIL BACU005407/1-496 PAGKLSQCHQ LLQKKSHCKR VFVTC----- --QNSSPAGL GAGTVTSIIL 401 450 ENSP00000342681/1-495 ALVLLVVLLV VCGPLAYKKL VKKFRQKKQR QWIGPTGMNQ NMSFHRNHTA ENSBTAP00000018258/1-495 ALLLLAVLLV VCGPLAYKKV VKKFRQKKQR QWIGPTGMNQ NMSFHRNHTV ENSTTRP00000000037/1-492 ALVLVVMLLV VCGPLAYKKL VKKFRQKKQR QWIGPTGLNQ NMSFHRNHTV bmy_16547T0/1-483 ALVLAVVLLV VCGPLAYKKL XKKFRQKKQR QWIGPTGMNQ NMSFHRNHTV BACU005407/1-496 ALVLAVVLLV VCGPLAYKKL VKKFRQKKQR QWIGPTGMNQ NMSFHRNHTV 451 500 ENSP00000342681/1-495 TVRSHAENPT ASHVDNEYSQ PPRNSHLSAY PALEGALHRS SMQPDNSSDS ENSBTAP00000018258/1-495 TVRSQVENAT ASHVENEYSQ PPRNSQISAY PALEGALHRI STQPDNSSDS ENSTTRP00000000037/1-492 TVRSQAENPT ASHLENEYSQ PPRNSQISAF PALEGALRRV STQPDNSSDS bmy_16547T0/1-483 TVRSQAENPT ASHLENEYSQ PPRNSQISAF PALEGALHRV STQPDNSSDS BACU005407/1-496 TVRSQAENPT ASHLENEYSQ PPRNSQISAF PALEGALHRV STQPDNSSDS 501 550 ENSP00000342681/1-495 DYDLHGAQRL ENSBTAP00000018258/1-495 DYELHGAQRL ENSTTRP00000000037/1-492 DYDLHGAQRL bmy_16547T0/1-483 DYDLHGAQRL BACU005407/1-496 DYDLHGAQRL