KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:02 2014 Check: 00 .. Name: ENSP00000293379/1-1049 Len: 1105 Check: 7453 Weight: 1.00 Name: ENSBTAP00000018261/1-1055 Len: 1105 Check: 322 Weight: 1.00 Name: BACU008102/1-730 Len: 1105 Check: 4404 Weight: 1.00 Name: ENSTTRP00000004215/1-1053 Len: 1105 Check: 6076 Weight: 1.00 Name: bmy_04715T0/1-1102 Len: 1105 Check: 9396 Weight: 1.00 // 1 50 ENSP00000293379/1-1049 ---------- ---------- ---------- ---------- ---------M ENSBTAP00000018261/1-1055 ---------- ---------- ---------- ---------- ---------M BACU008102/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004215/1-1053 ---------- ---------- ---------- ---------- ---------M bmy_04715T0/1-1102 MPPRPPPRQA GGGLSREFGK LLPALSHSPL GGLGSGSGSV APGQGRAGAM 51 100 ENSP00000293379/1-1049 GSRTPESPLH AVQLRWGPRR RPPLLP---- LLLLLLPPPP RVGGFNLDAE ENSBTAP00000018261/1-1055 GSRTPGSPLH AVQLRRGARR RPRLLPLLPP LLLLLLPPPP RVGGFNLDAE BACU008102/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004215/1-1053 GSRTPGSPLL AVQLRWGPRR RSRLLPL--- LLLLLLPPPP RVGGFNLDAE bmy_04715T0/1-1102 GSRTPGSPLL AVQLRWGPRR RSRLLPL--- LLLLLLPPPP RVGGFNLDAE 101 150 ENSP00000293379/1-1049 APAVLSGPPG SFFGFSVEFY RPGTDGVSVL VGAPKANTSQ PGVLQGGAVY ENSBTAP00000018261/1-1055 APAVLSGPPG SFFGFSVEFY RPGTDGVSVL VGAPKANTSQ PGVLQGGAVY BACU008102/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004215/1-1053 APAVLSGPPG SFFGFSVEFY RPGTDGVSVL VGAPKANTSQ PGVLQGGAVY bmy_04715T0/1-1102 APAVLSGPPG SFFGFSVEFY RPGTDGVSVL VGAPKANTSQ PGVLQGGAVY 151 200 ENSP00000293379/1-1049 LCPWGASPTQ CTPIEFDSKG SRLLESSLSS S-EGEEPVEY KSLQWFGATV ENSBTAP00000018261/1-1055 LCPWGTSPAQ CTPIEFDSKG SRIFESSTSS S-EGEEPVEY KSLQWFGATV BACU008102/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004215/1-1053 LCPWGTSPAQ CTPIEFDSKG SRILESSPPS SLEGEEPVEY KSLQWFGATV bmy_04715T0/1-1102 LCPWGTSPAQ CTPIEFDSKG SRILESSPPS SLEGEEPVEY KSLQWFGATV 201 250 ENSP00000293379/1-1049 RAHGSSILAC APLYSWRTEK EPLSDPVGTC YLSTDNFTRI LEYAPCRSDF ENSBTAP00000018261/1-1055 RAHGSSILAC APLYSWRTEK EPQSDPVGTC YLSTGNFTQI LEYAPCRSDF BACU008102/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004215/1-1053 RAHGSSILAC APLYSWRTEK EPLSDPVGTC YLSTDNFTRI LEYAPCRSDF bmy_04715T0/1-1102 RAHGSSILAC APLYSWRTEK EPLSDPVGTC YLSTDNFTRI LEYAPCRSDF 251 300 ENSP00000293379/1-1049 SWAAGQGYCQ GGFSAEFTKT GRVVLGGPGS YFWQGQILSA TQEQIAESYY ENSBTAP00000018261/1-1055 SQEAGQGYCQ GGFSAEFTKT GRVVLGGPGS YFWQGQILSA TQEQIAESYY BACU008102/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004215/1-1053 SRAAGQGYCQ GGFSAEFTKT GRVVLGGPGS YFWQGQILSA TQEQIAESYY bmy_04715T0/1-1102 SRAAGQGYCQ GGFSAEFTKT GRVVLGGPGS YFWQGQILSA TQEQIAESYY 301 350 ENSP00000293379/1-1049 PEYLINLVQG QLQTRQASSI YDDSYLGYSV AVGEFSGDDT EDFVAGVPKG ENSBTAP00000018261/1-1055 PGYLINPVRG QLQTRQASSI YDDSYLGYSV AVGEFSGDDR EDFVAGVPKG BACU008102/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004215/1-1053 PGYLINPVRG QLQTRQASSI YDDSYLGYSV AVGEFSGDDT EDFIAGVPKG bmy_04715T0/1-1102 PGYLINPVRG QLQTRQASSI YDDSYLGYSV AVGEFSGDDT EDFVAGVPKG 351 400 ENSP00000293379/1-1049 NLTYGYVTIL NGSDIRSLYN FSGEQMASYF GYAVAATDVN GDGLDDLLVG ENSBTAP00000018261/1-1055 NLTYGYVTIL NGSDIRSLYN FSGEQMASYF GYAVAATDIN GDGLDDLLVG BACU008102/1-730 ---------- ---------- -----MASYF GYAVAATDVN GDGLDDLLVG ENSTTRP00000004215/1-1053 NLTYGYVTIL NGSDIRSLYN FSGEQMASYF GYAVAATDIN GDGLDDLLVG bmy_04715T0/1-1102 NLTYGYVTIL NGSDIRSLYN FSGEQMASYF GYSVAATDIN GDGLDDLLVG 401 450 ENSP00000293379/1-1049 APLLMDRTPD GRPQEVGRVY VYLQHPAGIE PTPTLTLTGH DEFGRFGSSL ENSBTAP00000018261/1-1055 APLLMERTAD GRPQEVGRVY IYLQRLAGME PTPTLTLTGQ DEFGRFGSSL BACU008102/1-730 APLLMERTAD GRPQEVGRVY IYLQRPAGMD PMPTLTLTGH DEFGRFGSSL ENSTTRP00000004215/1-1053 APLLMERTAD GRPQEVGRVY VYLQRPAGME TVPTLTLTGH DEFGRFGSSL bmy_04715T0/1-1102 APLLMERTAD GRPQEVGRVY IYLQRPAGME PMPTLTLTGH DEFGRFGSSL 451 500 ENSP00000293379/1-1049 TPLGDLDQDG YNDVAIGAPF GGETQQGVVF VFPGGPGGLG SKPSQVLQPL ENSBTAP00000018261/1-1055 TPLGDLDQDG YNDVAIGAAF GGENRQGVVF IFPGGPGGLA SKPSQVLLPL BACU008102/1-730 TPLGDLDQDG YNDVAIGAAF GGENQQGVVF VFPGGPGGLA SKPSQVLLPL ENSTTRP00000004215/1-1053 TPLGDLDQDG YNDVAVGAAF GGENQQGVVF VFPGGPGGLA SKPSQVLLPL bmy_04715T0/1-1102 TPLGDLDQDG YNDVAVGAAF GGENQQGVVF VFPGGPGGLA SKPSQVLLPL 501 550 ENSP00000293379/1-1049 WAASHTPDFF GSALRGGRDL DGNGYPDLIV GSFGVDKAVV YRGRPIVSAS ENSBTAP00000018261/1-1055 WAAGHTPDFF GSALRGGRDL DGNGYPDLIV GSFGVDKAVV YRGRPIVSAS BACU008102/1-730 WAAGHTPDFF GSALRGGRDL DGNGYPDLIV GSFGVDKAVV YRGRPIVSAS ENSTTRP00000004215/1-1053 WAAGHTPDFF GSALRGGRDL DGNGYPDLIV GSFGVDKAVV YRGRPIVSAS bmy_04715T0/1-1102 WAAGHTPDFF GSALRGGRDL DGNGYPDLIV GSFGVDKAVV YRGRPIVSAS 551 600 ENSP00000293379/1-1049 ASLTIFPAMF NPEERSCSLE GNPVACINLS FCLNASGKHV ADSIGFTVEL ENSBTAP00000018261/1-1055 ASLTIFPAMF NPEEHSCSLE GNPVTCINLS FCLNASGKHV PDSIGFTVEL BACU008102/1-730 ASLTIFPAMF NPEEHSCSLE GNPAACINLS FCLNASGKHV PDSIGFTVEL ENSTTRP00000004215/1-1053 ASLTIFPAMF NPEEHSCSLG GNPASCINLS FCLNASGKHV PDSIGFTVEL bmy_04715T0/1-1102 ASLTIFPAMF NPEEHSCSLG GNPASCINLS FCLNASGKHV PDSIGFTVEL 601 650 ENSP00000293379/1-1049 QLDWQKQKGG VRRALFLASR QATLTQTLLI QNGAREDCRE MKIYLRNESE ENSBTAP00000018261/1-1055 QLDWQKQKGG VRRALFLASR QATLTQTLLI QNGAREDCRE MKIYLRNESE BACU008102/1-730 QLDWQKQKGG ARRALFLASR QATLAQTLLI QNGAREDCRE MKIYLRNESE ENSTTRP00000004215/1-1053 QLDWQKQKGG ARRALFLASR QATLTQTLLI QNGAREDCRE MKIYLRNESE bmy_04715T0/1-1102 QLDWQKQKGG ARRALFLASR QATLTQTLLI QNGAREDCRE MKIYLRNESE 651 700 ENSP00000293379/1-1049 FRDKLSPIHI ALNFSLDPQA PVDSHGLRPA LHYQSKSRIE DKAQILLDCG ENSBTAP00000018261/1-1055 FRDKLSPIHI ALNFSLDPQA PVDSHGLRPV LHYQSKSRIE DKAQILLDCG BACU008102/1-730 FRDKLSPIHI ALNFSLDPQA PVDSHGLRPV LHYQSKSRIE DKAQILLDCG ENSTTRP00000004215/1-1053 FRDKLSPIHI ALNFSLDPQA PVDSHGLRPV LHYQSKSRIE DKAQILLDCG bmy_04715T0/1-1102 FRDKLSPIHI ALNFSLDPQA PVDSHGLRPV LHYQSKSRIE DKAQILLDCG 701 750 ENSP00000293379/1-1049 EDNICVPDLQ LEVFGEQNHV YLGDKNALNL TFHAQNVGEG GAYEAELRVT ENSBTAP00000018261/1-1055 EDNICVPDLQ LEVFGEQNHV YLGDKNSLNL TFHAQNVGEG GAYEAELRVT BACU008102/1-730 EDNICVPDLQ LEVFGEQNHV YLGDKNSLNL TFHAQNVGEG GAYEAELRVT ENSTTRP00000004215/1-1053 EDNICVPDLQ LEVFGEQNHV YLGDKNSLNL TFHAQNAGEG GAYEAELRVT bmy_04715T0/1-1102 EDNICVPDLQ LEVFGEQNHV YLGDKNSLNL TFHAQNVGEG GAYEAELRVT 751 800 ENSP00000293379/1-1049 APPEAEYSGL VRHPGNFSSL SCDYFAVNQS RLLVCDLGNP MKAGASLWGG ENSBTAP00000018261/1-1055 APPEAEYSGL VRHPGNFSSL SCDYFAVNQS RLLVCDLGNP MKAGASLWGG BACU008102/1-730 APPEAEYSGL VRHPGNFSSL SCDYFAVNQS RLLVCDLGNP MKAGASLWGG ENSTTRP00000004215/1-1053 APPEAEYSGL VRHPGNFSSL SCDYFAVNQS RLLVCDLGNP MKAGASLWGG bmy_04715T0/1-1102 APPEAEYSGL VRHPGNFSSL SCDYFAVNQS RLLVCDLGNP MKAGASLWGG 801 850 ENSP00000293379/1-1049 LRFTVPHLRD TKKTIQFDFQ ILSKNLNNSQ SDVVSFRLSV EAQAQVTLNG ENSBTAP00000018261/1-1055 LRFTVPHLRD TKKTIQFDFQ ILSKNLNNSQ SDVVSFRLSV EAQAQVSLNG BACU008102/1-730 LRFTVPHLRD TKKTIQFDFQ ILSKNLNNSQ SEVVSFRLSV EAQAQVSLNG ENSTTRP00000004215/1-1053 LRFTVPHLRD MKKTIQFDFQ ILSKNLNNSQ SEVVSFQLSV EAQAQVSLNG bmy_04715T0/1-1102 LRFTVPHLRD TKKTIQFDFQ ILSKNLNNSQ SEVVSFRLSV EAQAQVSLNG 851 900 ENSP00000293379/1-1049 VSKPEAVLFP VSDWHPRDQP QKEEDLGPAV HHVYELINQG PSSISQGVLE ENSBTAP00000018261/1-1055 VSKPEAVLFP MSDWHPQDQP QEEGDVGPAV HHVYELINLG PSSISQGVLE BACU008102/1-730 VSKPEAVLFP VSDWHPRDQP QEEGDVGPAV HHVYELINLG PSSISRGVLE ENSTTRP00000004215/1-1053 VSKPEAVLFP VTDWHPRDQP QEEGDVGPAV HHVYELINLG PSSISRGVLE bmy_04715T0/1-1102 VSKPEAVLFP VSDWHPRDQP QEEGDVGPAV HHVYELINLG PSSISRGVLE 901 950 ENSP00000293379/1-1049 LSCPQALEGQ QLLYVTRVTG L-NCTTNHPI NPKGLELDPE GSLHHQ-QKR ENSBTAP00000018261/1-1055 LSCPHALDGQ QLLYVTRVTG LSNCTTSHPP NPEGLELDPE GSQHHRLQRR BACU008102/1-730 LSCPQALEGQ QLLYVTRVTG LSNCTTSHPP NPQGLELDPK GSQHHRLQRR ENSTTRP00000004215/1-1053 LSCPQALEGQ QLLYVTRVTG LSNCTTSHPP NPQGLELDPE GSQHHRLQRR bmy_04715T0/1-1102 LSCPQALDGQ QLLYVTRVTG LSNCTTSHPP NPQGLELDPE GSQHHRLQRR 951 1000 ENSP00000293379/1-1049 EAPSRSSASS GPQILKCPEA ECFRLRCELG PLHQQESQSL QLHFRVWAKT ENSBTAP00000018261/1-1055 DVPGRSPASS GPQILKCPEA ECFKLRCELG PLHRQESRSL QLHFRVWAKT BACU008102/1-730 DAPGRSPASS GPQILKCPEA ECFRLRCELG PLHRQESRSL LLHFRVWAKT ENSTTRP00000004215/1-1053 DAPGRSPASS GPQILKCPEA ECFRLRCELG PLHRQESRSL LLHFRVWAKT bmy_04715T0/1-1102 DAPGRSPASS GPQILKCPEA ECFRLRCELG PLHRQESRSL LLHFRVWAKT 1001 1050 ENSP00000293379/1-1049 FLQREHQPFS LQCEAVYKAL KMPYRILPRQ LPQKERQVAT AVQWTKAEGS ENSBTAP00000018261/1-1055 FLQREHQPFS LQCEAVYEAL KMPYKILPRQ LPQKALQVAT AVQWIKAEGS BACU008102/1-730 FLQREHQPFS LQCEAVYEAL KMPYRILPRQ LPRKELQVAT AVQWIKAEGS ENSTTRP00000004215/1-1053 FLQREHQPFS LQCEAVYEAL KMPYRILPRQ LPRKELQVAT AVQWIKAEGS bmy_04715T0/1-1102 FLQREHQPFS LQCEAVYEAL KMPYRILPRQ LPRKELQVAT AVQWIKAEGS 1051 1100 ENSP00000293379/1-1049 YGVPLWIIIL AILFGLLLLG LLIYILYKLG FFKRSLPYGT AMEKAQLKPP ENSBTAP00000018261/1-1055 HGVPLWIIIL AILIGLLLLG LLIYILYKLG FFKRSLPYGT AMEKAQLKPP BACU008102/1-730 HSVPLWIIIL AILIGLLLLG LLIYILYKLG FFKRSLPYGT AMEKAQLKPP ENSTTRP00000004215/1-1053 HSVPLWIIIL AVLVGLLLLG LLIYILYKLG FFKRSLPYGT AMEKAQLKPP bmy_04715T0/1-1102 HSVPLWIIIL AILIGLLLLG LLIYILYKLG FFKRSLPYGT AMEKAQLKPP 1101 1150 ENSP00000293379/1-1049 ATSDA ENSBTAP00000018261/1-1055 ATSDA BACU008102/1-730 ATSDA ENSTTRP00000004215/1-1053 ATSDA bmy_04715T0/1-1102 ATSDA