KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:05 2014 Check: 00 .. Name: ENSTTRP00000007368/1-244 Len: 433 Check: 5069 Weight: 1.00 Name: bmy_06788T0/1-239 Len: 433 Check: 3576 Weight: 1.00 Name: ENSP00000011898/1-239 Len: 433 Check: 8229 Weight: 1.00 Name: BACU003111/1-398 Len: 433 Check: 2144 Weight: 1.00 Name: ENSBTAP00000018281/1-222 Len: 433 Check: 1862 Weight: 1.00 // 1 50 ENSTTRP00000007368/1-244 ---------- ---------- ---------- ---------- ---------- bmy_06788T0/1-239 ---------- ---------- ---------- ---------- ---------- ENSP00000011898/1-239 ---------- ---------- ---------- ---------- ---------- BACU003111/1-398 MGSLGAPLCA QRLAVLSRGE ERQLDIWQNF PPEKFGIPSP CLSRRQGTVA ENSBTAP00000018281/1-222 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007368/1-244 ---------- ---------- ---------- ---------- ---------- bmy_06788T0/1-239 ---------- ---------- ---------- ---------- ---------- ENSP00000011898/1-239 ---------- ---------- ---------- ---------- ---------- BACU003111/1-398 QLFQTRVILV TAPASFWTTT LQSLGLIMAL FRAGLSKALL VAVQSRPGDS ENSBTAP00000018281/1-222 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000007368/1-244 ---------- ---------- ---------- ---------- ---------- bmy_06788T0/1-239 ---------- ---------- ---------- ---------- ---------- ENSP00000011898/1-239 ---------- ---------- ---------- ---------- ---------- BACU003111/1-398 PSSPSVCRPA ILAAQPSGRL TEVALGWRVV VIVATLVTTI AVTIPAFPTL ENSBTAP00000018281/1-222 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000007368/1-244 -------MAR GCLCCLKYTM FL----FNLI FWLCGCGLLG VGIWLSVSQG bmy_06788T0/1-239 ---------- ---------- ---------Q --LCGCGLLG VGIWLSVSQG ENSP00000011898/1-239 -------MAR GCLCCLKYMM FL----FNLI FWLCGCGLLG VGIWLSVSQG BACU003111/1-398 SGHRVGLCQR RCRRCRRRPV LRAGPGFNEQ --LCGCGLLG VGIWLSVSQG ENSBTAP00000018281/1-222 ---------- ---------- ------LSLQ --LCGCGLLG VGIWLSVSQG 201 250 ENSTTRP00000007368/1-244 NFATFSPSFP SLSAANLVIA IGTVVMVTGF LGCLGAVKEN RCLLLSFFIV bmy_06788T0/1-239 NFATFSPSFP SLSAANLVIA IGTIVMVTGF LGCLGAIKEN RCLLLSFFIV ENSP00000011898/1-239 NFATFSPSFP SLSAANLVIA IGTIVMVTGF LGCLGAIKEN KCLLLSFFIV BACU003111/1-398 NFATFSPSFP SLSAANLVIA IGTIVMVTGF LGCLGAIKEN RCLLLSFFIV ENSBTAP00000018281/1-222 NFATFSPSFP SLSAANLVIA IGTIVMVTGF LGCLGAIKEN RCLLLSFFIV 251 300 ENSTTRP00000007368/1-244 LLITLLAELI LIILFFVYTD KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_06788T0/1-239 LLVILLAELI LITLFFVYMD KVNENARKDL KEGLLLYNSE NNVGLKNAWN ENSP00000011898/1-239 LLVILLAELI LLILFFVYMD KVNENAKKDL KEGLLLYHTE NNVGLKNAWN BACU003111/1-398 LLVILLAELI LITLFFVYMD KVNENARKDL KEGLLLYNSE NNVGLKNAWN ENSBTAP00000018281/1-222 LLIILLAELI LIILFFVYMD KVNENAKKDL KEGLLLYNSE NNVGLKNAWN 301 350 ENSTTRP00000007368/1-244 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXC CMENSQGCGR NSS-PVWRT- bmy_06788T0/1-239 IIQAEMRCCG VTDYTDWYPV LGENTVPDRC CMENSQGCGR NSSAPVWRTV ENSP00000011898/1-239 IIQAEMRCCG VTDYTDWYPV LGENTVPDRC CMENSQGCGR NATTPLWRT- BACU003111/1-398 IIQAEMRCCG VTDYTDWYPV LGENTVPDRC CMENSQGCGR NSSAPVWRT- ENSBTAP00000018281/1-222 IIQAEMHCCG VTDYKDWFSV LGENTVPDRC CMENSQGCGQ NNTTLVWKT- 351 400 ENSTTRP00000007368/1-244 ---------- ------GCYE -KVKMWFD-- -------DNK HVLGTVGMCI bmy_06788T0/1-239 RLHPTPPQGS VRWTAWGRWP GPPRRWLNVG RAGTHRPEAR RQVGSGGSGP ENSP00000011898/1-239 ---------- ------GCYE -KVKMWFD-- -------DNK HVLGTVGMCI BACU003111/1-398 ---------- ------GCYE -KVKTWFD-- -------DNK HVLGTVGMCI ENSBTAP00000018281/1-222 ---------- ------GCYE -KVTQWFA-- -------DNK HVLGTVGMCL 401 450 ENSTTRP00000007368/1-244 LIVQVRGPAS RSPAPKPEVE RPSLAQATVP AGL bmy_06788T0/1-239 TSGGVGGRGE WGLGL----- -CGGAL---- --- ENSP00000011898/1-239 LIMQILGMA- FSMTLFQHIH RTGKKYDA-- --- BACU003111/1-398 LTMQILGMA- FSMTLFQHIH RTGKKYDA-- --- ENSBTAP00000018281/1-222 LITQILGMA- FSMTLFQHIH RTGKKYDA-- ---