KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:04:05 2014  Check: 00 ..

 Name: bmy_08178T0/1-237         Len:    278  Check:  217  Weight:  1.00
 Name: ENSP00000358212/1-154     Len:    278  Check:  8997  Weight:  1.00
 Name: ENSBTAP00000018285/1-235  Len:    278  Check:  1140  Weight:  1.00
 Name: ENSTTRP00000000346/1-223  Len:    278  Check:  3482  Weight:  1.00

//


                          1                                                   50
bmy_08178T0/1-237         MALGGPSRSG NNSAVCINGL WENAVLSAKE EMARGGLRFW GFGQVLNTSL 
ENSP00000358212/1-154     ---MEPSKT- ---------- ---------- -FMR------ ---------- 
ENSBTAP00000018285/1-235  ---MESSKT- ---------- ---------- -FMR------ ---------- 
ENSTTRP00000000346/1-223  ---MGSSKT- ---------- ---------- -FMR------ ---------- 


                          51                                                 100
bmy_08178T0/1-237         KVVIPLALAG FVPYLSCQGT SSEDNMSHCL KIFQENTQRP AGGITPLSGH 
ENSP00000358212/1-154     NLPITPGYSG FVPFLSCQGM SKEDDMNHCV KTFQEKTQRY KEQLREL--C 
ENSBTAP00000018285/1-235  QMPITPGYSG FVPYLSCQGT SSEDNMANCL KIFQENTRRC KDQLEEF--H 
ENSTTRP00000000346/1-223  HLPITPGYSG FVPYLSCQGS SSEDNMSHCL KIFQENTQRS KDQLEDL--R 


                          101                                                150
bmy_08178T0/1-237         CS-----ELK PVCSEETVLR TLHQYYWQYC PLSLECKYIT KPLQEPPIPG 
ENSP00000358212/1-154     CAVATAPKLK PVNSEETVLQ ALHQYNLQYH PLILECKYVK KPLQEPPIPG 
ENSBTAP00000018285/1-235  CSVATAPKLK PVRSEGTVLR TLHQYYRQYH PLSLECKNIK KPLHEPPIPG 
ENSTTRP00000000346/1-223  CTVATAP-LK PVCSEETVLW TLHQYYRRYR PLSRECKYIK KPLQEPPIPG 


                          151                                                200
bmy_08178T0/1-237         WAGYLPRARV TELGCATRYT VMARNCYRDF LDIVEQARRA HLKPYEE--- 
ENSP00000358212/1-154     WAGYLPRAKV TEFGCGTRYT VMAKNCYKDF LEITERAKKA HLKPYEE--- 
ENSBTAP00000018285/1-235  WAGYLPRARV TELGCSTRYT VMARNCYRDF LDLMERAKQA HLKPYEKIYG 
ENSTTRP00000000346/1-223  WAGYLPRARV TELGCATRYT VMARNCYRDF LDVMEQTKRA HLKPYEEI-D 


                          201                                                250
bmy_08178T0/1-237         ---------- ---------- ---------- ---CPTLGRA LMEDPRPPVR 
ENSP00000358212/1-154     ---------- ---------- ---------- ---------- ---------- 
ENSBTAP00000018285/1-235  VKSTPPPPTP PPKVLLHEGL LPKYPDFSIP GARCPTLSRA LMEDPRPLMT 
ENSTTRP00000000346/1-223  VRPAAPPPTP SPKMLLHERL LPKYPDFSIP G------KGV LMEDPRRPVR 


                          251                                                300
bmy_08178T0/1-237         CGCTQRPNVS CNGKIYLEPL SSVKDVEG 
ENSP00000358212/1-154     ---------- ---------- -------- 
ENSBTAP00000018285/1-235  CGCPQRPSVW CSGKIYLEPL SGGKDMEG 
ENSTTRP00000000346/1-223  CGCAQRPNVL CNGRIYPEPL SSVK----