KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:04:05 2014 Check: 00 ..
Name: ENSP00000356191/1-332 Len: 332 Check: 559 Weight: 1.00
Name: ENSBTAP00000018286/1-321 Len: 332 Check: 9864 Weight: 1.00
Name: ENSTTRP00000012627/1-292 Len: 332 Check: 4843 Weight: 1.00
Name: bmy_11876T0/1-331 Len: 332 Check: 5320 Weight: 1.00
Name: BACU001091/1-331 Len: 332 Check: 5516 Weight: 1.00
//
1 50
ENSP00000356191/1-332 MRLLAFLSLL ALVLQETGTA SLPRKERKRR EEQMPREGDS FEVLPLRNDV
ENSBTAP00000018286/1-321 MKLLALLSLL ILMLQEARTA SLSE---ERE -------GDP YAILHLGDYV
ENSTTRP00000012627/1-292 KKLLALLSLL ALMLQEARTA SLPQTDRDRE GYHPHG-GDS YAVLQLGDYV
bmy_11876T0/1-331 MKLLALLSLL ALMLQEAGTA SLPKTERERE GDQLQGEGDS YAVLHLGDYV
BACU001091/1-331 MKLLALLSLL ALMLQEAGTA SLPKTERERE GDQPQGEGDS YAVLHLGDYV
51 100
ENSP00000356191/1-332 LNPDNYGEVI DLSNYEELTD YGDQLPEVKV TSLAPATSIS PAKSTTAPGT
ENSBTAP00000018286/1-321 LSLDNYDEVI DPSNYDELID YGDQLPQVKG TSLASLTRTR FTQSTEAART
ENSTTRP00000012627/1-292 LSLDNYDQVL DLSNYDEL-D YMDQLLHVKG TSLASPTRTS FTQSTRAPRT
bmy_11876T0/1-331 LSLDNYDQVI DLSNYDELTD YRDQLLKVKG TSLASPTRTS FTQSTKAPRT
BACU001091/1-331 LSLDNYDQVI DLSNYDELTD YMDQLPKVKG TSLASPTRTS FTQSTKAPRT
101 150
ENSP00000356191/1-332 PSSNPTMTRP TTAGLLLSSQ PNHGLPTCLV CVCLGSSVYC DDIDLEDIPP
ENSBTAP00000018286/1-321 LPSNPTTARP PTLGLLAAPA -NHGLPTCLI CVCLGSSVYC DDADLENIPP
ENSTTRP00000012627/1-292 PPSNPTMARP -TAGLLVSLT -SHGLPTCLI CVCLGSSVYC DDADLENIPP
bmy_11876T0/1-331 PPSNPTMARP RTLGLLVSPT -SHGLPTCLI CVCLGSSVYC DDADLEDIPP
BACU001091/1-331 PPSNPTMARP RTLGLLVSPT -SHGLPTCLI CVCLGSSVYC DDADLEDIPP
151 200
ENSP00000356191/1-332 LPRRTAYLYA RFNRISRIRA EDFKGLTKLK RIDLSNNLIS SIDNDAFRLL
ENSBTAP00000018286/1-321 LPQTTAYLYA RFNRISHIRA GDFKGLTKLK RIDLSGNSIS SIDDKALRLL
ENSTTRP00000012627/1-292 LPQTTAYLYA RFNRIRHIRA GDFKGLTKLK RIDLSSNFIS SIDDDALLLL
bmy_11876T0/1-331 LPQTTAYLYA RFNRISHIRA GDFKGLTKLK RIDLSSNSIS SIDDDALLLL
BACU001091/1-331 LPQTTAYLYA RFNRISHIRA GDFKGLTKLK RIDLSSNFIS SIDDDALLLL
201 250
ENSP00000356191/1-332 HALQDLILPE NQLEALPVLP SGIEFLDVRL NRLQSSGIQP AAFRAMEKLQ
ENSBTAP00000018286/1-321 PALRDLILPE NKLVALPTLP TSIEVLDVRM NRLQSSGIQP EAFRALEKLQ
ENSTTRP00000012627/1-292 PALQDLILPE NKLAALPVLP TGIEVLDIRL NQLQSSGIQP EAFRALEKLQ
bmy_11876T0/1-331 PALQDLILPE NKLAALPVLP TGIEVLDIRL NRLRSSGIQP EAFRALEKLQ
BACU001091/1-331 PALQDLILPE NKLAALPVLP TGIEVLDIRL NQLRSSGIQP EAFRALEKLQ
251 300
ENSP00000356191/1-332 FLYLSDNLLD SIPGPLPLSL RSVHLQNNLI ETMQRDVFCD PEEHKHTRRQ
ENSBTAP00000018286/1-321 FLYLADNLLD AIPPSLPLSL RSLHLQNNMI ETMQRDAFCD AEEHRHTRRP
ENSTTRP00000012627/1-292 FLYLADNLLD SIPRSLPLSL RSLHLQNNMI ETMQRDTFCD PERHKH----
bmy_11876T0/1-331 FLYLADNLLD SIPRSLPLSL RSLHLQNNMI ETMQRDTFCD AEEHKHTRRQ
BACU001091/1-331 FLYLANNLLD SIPRSLPLSL RSLHLQNNMI ETMQRDTFCD AEEHKHTRRQ
301 350
ENSP00000356191/1-332 LEDIRLDGNP INLSLFPSAY FCLPRLPIGR FT
ENSBTAP00000018286/1-321 LEDIRLDGNP INLSLFPSAY FCLPRLPTGR FV
ENSTTRP00000012627/1-292 ---------- ---------- ---------- --
bmy_11876T0/1-331 LEDIRLDGNP INLSLFPSAY FCLPRLPTGR FT
BACU001091/1-331 LEDIRLDGNP INLSLFPSAY FCLPRLPTGR FT