KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:05 2014 Check: 00 .. Name: ENSP00000356191/1-332 Len: 332 Check: 559 Weight: 1.00 Name: ENSBTAP00000018286/1-321 Len: 332 Check: 9864 Weight: 1.00 Name: ENSTTRP00000012627/1-292 Len: 332 Check: 4843 Weight: 1.00 Name: bmy_11876T0/1-331 Len: 332 Check: 5320 Weight: 1.00 Name: BACU001091/1-331 Len: 332 Check: 5516 Weight: 1.00 // 1 50 ENSP00000356191/1-332 MRLLAFLSLL ALVLQETGTA SLPRKERKRR EEQMPREGDS FEVLPLRNDV ENSBTAP00000018286/1-321 MKLLALLSLL ILMLQEARTA SLSE---ERE -------GDP YAILHLGDYV ENSTTRP00000012627/1-292 KKLLALLSLL ALMLQEARTA SLPQTDRDRE GYHPHG-GDS YAVLQLGDYV bmy_11876T0/1-331 MKLLALLSLL ALMLQEAGTA SLPKTERERE GDQLQGEGDS YAVLHLGDYV BACU001091/1-331 MKLLALLSLL ALMLQEAGTA SLPKTERERE GDQPQGEGDS YAVLHLGDYV 51 100 ENSP00000356191/1-332 LNPDNYGEVI DLSNYEELTD YGDQLPEVKV TSLAPATSIS PAKSTTAPGT ENSBTAP00000018286/1-321 LSLDNYDEVI DPSNYDELID YGDQLPQVKG TSLASLTRTR FTQSTEAART ENSTTRP00000012627/1-292 LSLDNYDQVL DLSNYDEL-D YMDQLLHVKG TSLASPTRTS FTQSTRAPRT bmy_11876T0/1-331 LSLDNYDQVI DLSNYDELTD YRDQLLKVKG TSLASPTRTS FTQSTKAPRT BACU001091/1-331 LSLDNYDQVI DLSNYDELTD YMDQLPKVKG TSLASPTRTS FTQSTKAPRT 101 150 ENSP00000356191/1-332 PSSNPTMTRP TTAGLLLSSQ PNHGLPTCLV CVCLGSSVYC DDIDLEDIPP ENSBTAP00000018286/1-321 LPSNPTTARP PTLGLLAAPA -NHGLPTCLI CVCLGSSVYC DDADLENIPP ENSTTRP00000012627/1-292 PPSNPTMARP -TAGLLVSLT -SHGLPTCLI CVCLGSSVYC DDADLENIPP bmy_11876T0/1-331 PPSNPTMARP RTLGLLVSPT -SHGLPTCLI CVCLGSSVYC DDADLEDIPP BACU001091/1-331 PPSNPTMARP RTLGLLVSPT -SHGLPTCLI CVCLGSSVYC DDADLEDIPP 151 200 ENSP00000356191/1-332 LPRRTAYLYA RFNRISRIRA EDFKGLTKLK RIDLSNNLIS SIDNDAFRLL ENSBTAP00000018286/1-321 LPQTTAYLYA RFNRISHIRA GDFKGLTKLK RIDLSGNSIS SIDDKALRLL ENSTTRP00000012627/1-292 LPQTTAYLYA RFNRIRHIRA GDFKGLTKLK RIDLSSNFIS SIDDDALLLL bmy_11876T0/1-331 LPQTTAYLYA RFNRISHIRA GDFKGLTKLK RIDLSSNSIS SIDDDALLLL BACU001091/1-331 LPQTTAYLYA RFNRISHIRA GDFKGLTKLK RIDLSSNFIS SIDDDALLLL 201 250 ENSP00000356191/1-332 HALQDLILPE NQLEALPVLP SGIEFLDVRL NRLQSSGIQP AAFRAMEKLQ ENSBTAP00000018286/1-321 PALRDLILPE NKLVALPTLP TSIEVLDVRM NRLQSSGIQP EAFRALEKLQ ENSTTRP00000012627/1-292 PALQDLILPE NKLAALPVLP TGIEVLDIRL NQLQSSGIQP EAFRALEKLQ bmy_11876T0/1-331 PALQDLILPE NKLAALPVLP TGIEVLDIRL NRLRSSGIQP EAFRALEKLQ BACU001091/1-331 PALQDLILPE NKLAALPVLP TGIEVLDIRL NQLRSSGIQP EAFRALEKLQ 251 300 ENSP00000356191/1-332 FLYLSDNLLD SIPGPLPLSL RSVHLQNNLI ETMQRDVFCD PEEHKHTRRQ ENSBTAP00000018286/1-321 FLYLADNLLD AIPPSLPLSL RSLHLQNNMI ETMQRDAFCD AEEHRHTRRP ENSTTRP00000012627/1-292 FLYLADNLLD SIPRSLPLSL RSLHLQNNMI ETMQRDTFCD PERHKH---- bmy_11876T0/1-331 FLYLADNLLD SIPRSLPLSL RSLHLQNNMI ETMQRDTFCD AEEHKHTRRQ BACU001091/1-331 FLYLANNLLD SIPRSLPLSL RSLHLQNNMI ETMQRDTFCD AEEHKHTRRQ 301 350 ENSP00000356191/1-332 LEDIRLDGNP INLSLFPSAY FCLPRLPIGR FT ENSBTAP00000018286/1-321 LEDIRLDGNP INLSLFPSAY FCLPRLPTGR FV ENSTTRP00000012627/1-292 ---------- ---------- ---------- -- bmy_11876T0/1-331 LEDIRLDGNP INLSLFPSAY FCLPRLPTGR FT BACU001091/1-331 LEDIRLDGNP INLSLFPSAY FCLPRLPTGR FT