KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:04:07 2014 Check: 00 .. Name: BACU002083/1-219 Len: 465 Check: 5071 Weight: 1.00 Name: bmy_15972T0/1-300 Len: 465 Check: 3044 Weight: 1.00 Name: ENSP00000244314/1-463 Len: 465 Check: 6520 Weight: 1.00 Name: ENSBTAP00000018295/1-465 Len: 465 Check: 998 Weight: 1.00 // 1 50 BACU002083/1-219 ---------- ---------- ---------- ---------- ---------- bmy_15972T0/1-300 ---------- ---------- ---------- ---------- ---------- ENSP00000244314/1-463 MATSKLPVVP GEEENTILMA KERLEALRTA FESGDLPQAA SHLQELLAST ENSBTAP00000018295/1-465 MATSKLPAVS GEEETTILMA KEELEALRTA FESGDIPQAA SRLRELLASS 51 100 BACU002083/1-219 ---------- ---------- ---------- ---------- -MTVDPTPYP bmy_15972T0/1-300 ---------- ---------- ---------- ---------- ---MQPSPYP ENSP00000244314/1-463 ESIRLEVGVT GESGAGKSSL INALRGLEAE DPGAALTGVM ETTMQPSPYP ENSBTAP00000018295/1-465 DCTRLEVGVT GESGAGKSSL INALRGLGAE DPDAALTGVV ETTIEPSPYP 101 150 BACU002083/1-219 HPKYPNIVIW DLPGIGTHAF RADKYLQRVL LGRYDFFLII TLESFAADHA bmy_15972T0/1-300 HPQFPEVTLW DLLGAGSPGC PADKYLKQVD FGRYDFFLLV FPRRCGAVET ENSP00000244314/1-463 HPQFPDVTLW DLPGAGSPGC PADKYLKQVD FSRYDFFLLV SPRRCGAVET ENSBTAP00000018295/1-465 HPQFPDVTLW DLPGAGSPGC SADKYLKQVD FGRYDFFLLV SPRRCGAVET 151 200 BACU002083/1-219 QLALEI---- ---------- ---------- ---------- ---------- bmy_15972T0/1-300 RLASEILRRG KQFYFVRTEV DEDLAATRTQ RPSGFSEAAV LQEMREHGAE ENSP00000244314/1-463 RLAAEILCQG KKFYFVRTKV DEDLAATRTQ RPSGFREAAV LQEIRDHCAE ENSBTAP00000018295/1-465 RLASEILRQG KKFYFVRTKV DEDLAATRMQ RPSGFSEGAV LHEIREHCVE 201 250 BACU002083/1-219 --RGGGASAS T---ASTPSP C--------- -WSGRRPRYG STSGWWPWWP bmy_15972T0/1-300 RLRAAGVNDP RVFLVSNLSP ARYDFPLLVS TWEHDLPAPR RHAGLLSLPD ENSP00000244314/1-463 RLREAGVADP RIFLVSNLSP ARYDFPTLVS TWEHDLPSHR RHAGLLSLPD ENSBTAP00000018295/1-465 RLRGAGVHDP RVFLVSNLSP ARYDFPLLMS TWERDLPAHR RHAGLLSLPD 251 300 BACU002083/1-219 AG-------- --------PT RVPCRVCRKW PETCTHT--- ---LTRSLEG bmy_15972T0/1-300 ISLEALRKKK DTLQEQVLKT ALVLGVIQAV PGPRLAAAYD DALLIRSLRG ENSP00000244314/1-463 ISLEALQKKK AMLQEQVLKT ALVLGVIQAL PVPGLAAAYD DALLIHSLRG ENSBTAP00000018295/1-465 ISLEALQKKK DMLQEQVLKT ALVSGVIQAL PVPGLAAAYD DALLIRSLRG 301 350 BACU002083/1-219 YRRSFSLDKS SLVRLAEQTG RPLHKVLEAL QGP-KTEITE ALVAELLGQA bmy_15972T0/1-300 YHRGFGLDDD SLAKLAEQVG KQAGDLRSVI LSPLANEVSP ETVLRLYSQS ENSP00000244314/1-463 YHRSFGLDDD SLAKLAEQVG KQAGDLRSVI RSPLANEVSP ETVLRLYSQS ENSBTAP00000018295/1-465 YHRSFGLDDD SLAKLAEQVG KQAGDLRSVI RSPLANEVSP ETVLRLYSQS 351 400 BACU002083/1-219 SGDASAFSQE -PLSVPVLGS LAACGLPFAT VY-------- -------RIL bmy_15972T0/1-300 SDGAMRVARA SEKGIRLFGT LVAGGH---- ---------- -------QLR ENSP00000244314/1-463 SDGAMRVARA FERGIPVFGT LVAGGISFGA VYTMLQGCLN EMAEDAQRVR ENSBTAP00000018295/1-465 SDGAMRVARA FEKGIPVFGT LVAGGISFGT VYTMLQGCLN EMAEDAQRVR 401 450 BACU002083/1-219 HTSLDVDI-- ---------- ---------- ---------- ---------- bmy_15972T0/1-300 HRLHHAPGLP QRDG------ ---------- ---------- ---------- ENSP00000244314/1-463 IKALEDDE-P QPEVSLEVAS DNGVEKGGSG EGGGEEAPLS TCRKLGLLLK ENSBTAP00000018295/1-465 IKALEEEEDT QPDVSLEAAG DNGVEKRGSG EGSMEEAPLS TRRKLGLLLK 451 500 BACU002083/1-219 ---------- ----- bmy_15972T0/1-300 ---------- ----- ENSP00000244314/1-463 YILDSWKKHD -SEEK ENSBTAP00000018295/1-465 YILDSWKKRD LAEDK