KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:08 2014 Check: 00 .. Name: ENSBTAP00000018304/1-673 Len: 676 Check: 9115 Weight: 1.00 Name: ENSP00000358211/1-675 Len: 676 Check: 5093 Weight: 1.00 Name: ENSTTRP00000000349/1-675 Len: 676 Check: 4120 Weight: 1.00 Name: bmy_08177T0/1-661 Len: 676 Check: 9294 Weight: 1.00 Name: BACU004683/1-654 Len: 676 Check: 3642 Weight: 1.00 // 1 50 ENSBTAP00000018304/1-673 ---RKEGGGD ASTKETVPTS AYSSPARSLG DTGITPLSPS HIVNDADPNV ENSP00000358211/1-675 MADKEAGGSD -GPRETAPTS AYSSPARSLG DTGITPLSPS HIVNDTDSNV ENSTTRP00000000349/1-675 MADKEVGGSD TGPREMAPAS AYSSPARSLG DTGITPLSPS HTVNDADPNV bmy_08177T0/1-661 ---------- -----MAPTS ACSSPARSLG DTGITPLSPS HTVNDADPNV BACU004683/1-654 ---------- -----MAPTS ACSSPARSLG DTGITPLSPS HTVNDADANV 51 100 ENSBTAP00000018304/1-673 SEQQTFLVVV AIDFGTTSSG YAYSFTKEPE CIHVMRRWEG GDPGVSNQKT ENSP00000358211/1-675 SEQQSFLVVV AVDFGTTSSG YAYSFTKEPE CIHVMRRWEG GDPGVSNQKT ENSTTRP00000000349/1-675 SEQQTFLVVV AVDFGTTSSG YAYSFTKEPE CIHVMRRWEG GDPGVSNQKT bmy_08177T0/1-661 SEQQTFLVVV AVDFGTTSSG YAYSFTKEPE CIHVMRRWEG GDPGVSNQKT BACU004683/1-654 SEQQTFLVVV AVDFGTTSSG YAYSFTKEPE CIHVMRRWEG GDPGVSNQKT 101 150 ENSBTAP00000018304/1-673 PTTILLTPER KFHSFGYAAR DFYHDLDPNE AKQWLYLEKF KMKLHTTGDL ENSP00000358211/1-675 PTTILLTPER KFHSFGYAAR DFYHDLDPNE AKQWLYLEKF KMKLHTTGDL ENSTTRP00000000349/1-675 PTTILLTPER KFHSFGYAAR DFYHDLDPNE AKQWLYLEKF KMKLHTTGDL bmy_08177T0/1-661 PTTILLTPER KFHGFGYAAR DFYHDLDPSE AKQWLYLEKF KMKLHTTGDL BACU004683/1-654 PTTILLTPER KFHSFGYAAR DFYHDLDPSE AKQWLYLEKF KMKLHTTGDL 151 200 ENSBTAP00000018304/1-673 TMDTDLTAAN GKKVKALEIF AYALQYFKEQ ALKELSDQAG SEFENSDVRW ENSP00000358211/1-675 TMDTDLTAAN GKKVKALEIF AYALQYFKEQ ALKELSDQAG SEFENSDVRW ENSTTRP00000000349/1-675 -MDTDLTAAN GKKIKALEIF AYALRYFKEQ ALKELSDQTG SEFENSDVRW bmy_08177T0/1-661 TMDTDLTAAN GKKIKALEIF AYALQYFKEQ ALKELSDQTG SEFENSDVRW BACU004683/1-654 TMDTDLTAAN GKKIKALEIF AYALQYFKEQ ALKELSDQTG SEFENSDVRW 201 250 ENSBTAP00000018304/1-673 VITVPAIWKQ PAKQFMRQAA YQAGLASPEN SEQLIIALEP EAASIYCRKL ENSP00000358211/1-675 VITVPAIWKQ PAKQFMRQAA YQAGLASPEN SEQLIIALEP EAASIYCRKL ENSTTRP00000000349/1-675 VITVPAIWKQ PAKQFMRQAA YQAGLASPEN SEQLIIALEP EAASIYCRKL bmy_08177T0/1-661 VITVPAIWKQ PAKQFMRQAA YQAGLASPEN SEQLFIALEP EAASIYCRKL BACU004683/1-654 VITVPAIWKQ PAKQFMRQAA YQAGLASPEN SEQLFIALEP EAASIYCRKL 251 300 ENSBTAP00000018304/1-673 RLHQMTDLSS KAAVNGYSSS DTVGAGFAQA KEHIRRNRQS RTFLVENVIG ENSP00000358211/1-675 RLHQMIELSS KAAVNGYSGS DTVGAGFTQA KEHIRRNRQS RTFLVENVIG ENSTTRP00000000349/1-675 RLHQMIELSS KAAVNGYSAS DTVGAGFAQA KEHTRRNRQS RTFLVENVIG bmy_08177T0/1-661 RLHQMTELSS KATVNGYSSS DTVGAGFAQA KEHVRRNRQS RTFLVENVIG BACU004683/1-654 RLHQMIELSS KATVNGYSSS DTVGAGFAQA KEHVRRNRQS RTFLVENVIG 301 350 ENSBTAP00000018304/1-673 EIWSELEEGD KYVVVDSGGG TVDLTVHQIR LPEGHLKELY KATGGPYGSL ENSP00000358211/1-675 EIWSELEEGD KYVVVDSGGG TVDLTVHQIR LPEGHLKELY KATGGPYGSL ENSTTRP00000000349/1-675 EIWSELEEGD KYVVVDSGGG TVDLTVHQIR LPEGHLKELY KATGGPYGSL bmy_08177T0/1-661 EIWSELEEGD KYVVVDSGGG TVDVTVHQIW LPEGHLKELY KATGGPYGSL BACU004683/1-654 EIWSELEEGD KYVVVDSGGG TVDVTVHQIR LPEGHLKELY KATGGPYGSL 351 400 ENSBTAP00000018304/1-673 GVDYEFEKLL CKIFGEDFIE QFKIKRPAAW VDLMIAFESR KRAAAPDRTN ENSP00000358211/1-675 GVDYEFEKLL YKIFGEDFIE QFKIKRPAAW VDLMIAFESR KRAAAPDRTN ENSTTRP00000000349/1-675 GVDYEFEKLL CKIFGEDFIE QFKIKRPAAW VDLMIAFESR KRAAAPDRTN bmy_08177T0/1-661 GVDYEFEKLL CKIFGEDFIE QFKIKRPAAW VDLMIAFESR KRAAAPDRTN BACU004683/1-654 GVDYEFEKLL CKIFGEDFIE QFKIKRPAAW VDLMIAFESR KRAAAPDRTN 401 450 ENSBTAP00000018304/1-673 PLNITLPFSF IDYYKKFRGH SVEHALRKSN VDFVKWSSQG MLRMSPDAMN ENSP00000358211/1-675 PLNITLPFSF IDYYKKFRGH SVEHALRKSN VDFVKWSSQG MLRMSPDAMN ENSTTRP00000000349/1-675 PLNITLPFSF IDYYKKFRGH SVEHALRKSN VDFVKWSSQG MLRMSPDAMN bmy_08177T0/1-661 PLNITLPFSF IDYYKKFRGH SVEHALRKSN VDFVKWSSQG MLRMSPDAMN BACU004683/1-654 PLNITLPFSF IDYYKKFRGH SVEHALRKSN VDFVKWSSQG MLRMSPDAMN 451 500 ENSBTAP00000018304/1-673 ALFKPTIDSI IEHLRDLFQK PEVSTVKFLF LVGGFAEAPL LQQAVQAAFG ENSP00000358211/1-675 ALFKPTIDSI IEHLRDLFQK PEVSTVKFLF LVGGFAEAPL LQQAVQAAFG ENSTTRP00000000349/1-675 ALFKPTIDSI IEHLRDLFQK PEVSTVKFLF LVGGFAEAPL LQQAVQAAFG bmy_08177T0/1-661 ALFKPTIDSI IEHLRDLFQK PEVSTVKFLF LVGGFAEAPL LQQAVQAAFG BACU004683/1-654 ALFKPTIDSI IEHLRDLFQK PEVSTVKFLF LVGGFAEAPL LQQAVQAAVG 501 550 ENSBTAP00000018304/1-673 DKCRVIIPQD VGLTILKGAV LFGLDPAVIK VRRSPLTYGV GVLNRYVEGK ENSP00000358211/1-675 DQCRIIIPQD VGLTILKGAV LFGLDPAVIK VRRSPLTYGV GVLNRYVEGK ENSTTRP00000000349/1-675 DQCRIIIPQD VGLTILKGAV LFGLDPTVIK VRRSPLTYGV GVLNRYVEGK bmy_08177T0/1-661 DKCRIIIPQD VGLTILKGAV LFGLDPAVIK VRRSPLTYGV GVLNRYVEGK BACU004683/1-654 DKCRIIIPQD VGLTILKGAV LFGLDPAVIK VRRSPLTYGV G-------GK 551 600 ENSBTAP00000018304/1-673 HPPEKLLVKD GTRWCTDVFD KFISADQSVA LGELVKRSYT PAKPSQLVIV ENSP00000358211/1-675 HPPEKLLVKD GTRWCTDVFD KFISADQSVA LGELVKRSYT PAKPSQLVIV ENSTTRP00000000349/1-675 HPPEKLLVKD GTRWCTDVFD KFISADQSVA LGELVKRSYT PAKPSQLVIV bmy_08177T0/1-661 HPPEKLLVKD GTRWCTDVFD KFISADQSVA LGELVKRSYT PAKPSQLVIV BACU004683/1-654 HPPEKLLVKD GTRWCTDVFD KFISADQSVA LGELVKRSYT PAKPSQLVIV 601 650 ENSBTAP00000018304/1-673 INIYSSELDD VSFITDPGVK KCGTLRLDLT GASSTNVPAR REIQTLMQFG ENSP00000358211/1-675 INIYSSEHDN VSFITDPGVK KCGTLRLDLT GTSGTAVPAR REIQTLMQFG ENSTTRP00000000349/1-675 INIYSSELDN VSFITDPGVK KCGTLRLDLT GTSGTAVPTR REIQTLMQFG bmy_08177T0/1-661 INIYSSELDN VSFITDPGVK KCGTLRLDLT GASGTAVPTR REIQTLMQFG BACU004683/1-654 INIYSSELDN VSFITDPGVK KCGTLRLDLT GASGAAVPTR REIQTLMQFG 651 700 ENSBTAP00000018304/1-673 DTEIKATAID IATSKSVKVG IDFLNY ENSP00000358211/1-675 DTEIKATAID IATSKSVKVG IDFLNY ENSTTRP00000000349/1-675 DTEIKATAVD VATSKSVKVG IDFLNY bmy_08177T0/1-661 DTEIKATAID VATSKSVKVG IDFLNY BACU004683/1-654 DTEIKATAID VATSKSVKVG IDFLNY