KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:09 2014 Check: 00 .. Name: ENSTTRP00000012929/1-875 Len: 876 Check: 9984 Weight: 1.00 Name: bmy_14958T0/1-473 Len: 876 Check: 3582 Weight: 1.00 Name: ENSBTAP00000018305/1-875 Len: 876 Check: 456 Weight: 1.00 Name: ENSP00000339881/1-875 Len: 876 Check: 9880 Weight: 1.00 Name: BACU000421/1-875 Len: 876 Check: 9782 Weight: 1.00 // 1 50 ENSTTRP00000012929/1-875 MSGTKPDILW APHQVDRFVV CDSELSLYHV ESTVNSEFKA GSLRLSEDSA bmy_14958T0/1-473 MSGTKPDILW APHQVDRFVV CDSELSLYHV ESTVNSEFKA GSLRLSEDSA ENSBTAP00000018305/1-875 MSGSKPDILW APHQVDRFVV CDSELSLYHV ESTVNSELKA GSLRLSEDSA ENSP00000339881/1-875 MSGTKPDILW APHHVDRFVV CDSELSLYHV ESTVNSELKA GSLRLSEDSA BACU000421/1-875 MSGTKPDILW APHQVDRFVV CDSELSLYHV ESTVNSEFKA GSLRLSEDSA 51 100 ENSTTRP00000012929/1-875 ATLLSINSET PYMKCVAWYL NYDPECLLAV GQANGRVVLT SLGQDHNSKF bmy_14958T0/1-473 ATLLSINSET PYMKCVAWYL NCDPECLLAV GQANGRVVLT SLGQDHNSKF ENSBTAP00000018305/1-875 ATLLSINSET PYMKCVAWYL SYDPECLLAV GQANGRVVLT SLGQDHNSKF ENSP00000339881/1-875 ATLLSINSDT PYMKCVAWYL NYDPECLLAV GQANGRVVLT SLGQDHNSKF BACU000421/1-875 ATLLSINSET PYMKCVAWYL NYDPECLLAV GQANGRVVLT SLGQDHNSKF 101 150 ENSTTRP00000012929/1-875 KDLIGKEFVP KHARQCNTLA WNPLDSNWLA AGLDKHRADF SVLIWDICSK bmy_14958T0/1-473 KDLIGKEFVP KHARQCNTLA WNPLDSNWLA AGLDKHRADF SVLIWDICSK ENSBTAP00000018305/1-875 RDLIGKEFVP KHARQCNTLA WNPVDNNWLA AGLDKHRADF SVLIWDICSK ENSP00000339881/1-875 KDLIGKEFVP KHARQCNTLA WNPLDSNWLA AGLDKHRADF SVLIWDICSK BACU000421/1-875 KDLIGKEFVP KHARQCNTLA WNPLDSNWLA AGLDKHRADF SVLIWDICSK 151 200 ENSTTRP00000012929/1-875 YTPDIVPMEK VRLSAGETET TLLVTKPLYE LGQNDACLSL CWLPRDQKLL bmy_14958T0/1-473 YTPDIVPMEK VRLSAGEAET TLLVTKPLYE LGQNDACLSL CWLPRDQKLL ENSBTAP00000018305/1-875 YTPDIVPMEK VRLSVGETET SLLVTKPLYE LGQNDACLSL CWLPRDQKLL ENSP00000339881/1-875 YTPDIVPMEK VKLSAGETET TLLVTKPLYE LGQNDACLSL CWLPRDQKLL BACU000421/1-875 YTPDIVPMEK VRLSAGEAET TLLVTKPLYE LGQNDACLSL CWLPRDQKLL 201 250 ENSTTRP00000012929/1-875 LAGMHRNLAI FDLRNTSQKM FVNTKAVQGV TVDPYFHDRV ASFYEGQVAI bmy_14958T0/1-473 LAGMHRNLAI FDLRNTSQKM FVNTKAVQGV TVDPYFHDRV ASFYEGQVAI ENSBTAP00000018305/1-875 LAGMHRNLAI FDLRNTSQKM FVNTKAVQGV TVDPYFHDRV ASFYEGQVAI ENSP00000339881/1-875 LAGMHRNLAI FDLRNTSQKM FVNTKAVQGV TVDPYFHDRV ASFYEGQVAI BACU000421/1-875 LAGMHRNLAI FDLRNTSQKM FVNTKAVQGV TVDPYFHDRV ASFYEGQVAI 251 300 ENSTTRP00000012929/1-875 WDLRKFEKPV LTLTEQPKPL TKVAWCPTRT GLLATLTRDS NIIRLYDMQH bmy_14958T0/1-473 WDLRKFEKPV LTLTEQPKPL TKVAWCPTRT GLLATLTRDS NIIRLYDMQH ENSBTAP00000018305/1-875 WDLRKFEKPV LTLTEQPKPL TKVAWCPTRT GLLATLTRDS NIIRLYDMQH ENSP00000339881/1-875 WDLRKFEKPV LTLTEQPKPL TKVAWCPTRT GLLATLTRDS NIIRLYDMQH BACU000421/1-875 WDLRKFEKPV LTLTEQPKPL TKVAWCPTRT GLLATLTRDS NIIRLYDMQH 301 350 ENSTTRP00000012929/1-875 TPTPIGDETE PTIIERSVQP CDNYIASFAW HPTSQNRMIV VTPNRTMSDF bmy_14958T0/1-473 TPTPIGDETE PTIIERSVQP CDNYIASFAW HPTSQNRMIV VTPNRTMSDF ENSBTAP00000018305/1-875 TPTPIGDETE PTIIERSVQP CDNYIASFAW HPTSQNRMIV VTPNRTMSDF ENSP00000339881/1-875 TPTPIGDETE PTIIERSVQP CDNYIASFAW HPTSQNRMIV VTPNRTMSDF BACU000421/1-875 TPTPIGDETE PTIIERSVQP CDNYIASFAW HPTSQNRMIV VTPNRTMSDF 351 400 ENSTTRP00000012929/1-875 TVFERISLAW SPITSLMWAC GRHLYECAEE ENDNSLEKDI ATKMRLRALS bmy_14958T0/1-473 TVFERISLAW SPITSLMWAC GRHLYECAEE ENDNSLEKDI ATKMRLRALS ENSBTAP00000018305/1-875 TVFERISLAW SPITSLMWAC GRHLYECAEE ENDNSLEKDI ATKMRLRALS ENSP00000339881/1-875 TVFERISLAW SPITSLMWAC GRHLYECTEE ENDNSLEKDI ATKMRLRALS BACU000421/1-875 TVFERISLAW SPITSLMWAC GRHLYECAEE ENDNSLEKDI ATKMRLRALS 401 450 ENSTTRP00000012929/1-875 RYGLDTEQVW RNHILAGNED PQLKSLWYTL HF-MKQYTED MDQKSPGNKG bmy_14958T0/1-473 RYGLDTEQVW RNHILAGNED PQLKSLWYTL HYILCIYTED MDQKSPGNKG ENSBTAP00000018305/1-875 RYGLDTEQVW RNHILAGNED PQLKSLWYTL HF-MKQYTED MDQKSPGNKG ENSP00000339881/1-875 RYGLDTEQVW RNHILAGNED PQLKSLWYTL HF-MKQYTED MDQKSPGNKG BACU000421/1-875 RYGLDTEQVW RNHILAGNED PQLKSLWYTL HF-MKQYTED MDQKSPGNKG 451 500 ENSTTRP00000012929/1-875 SLVYSGIKSI VKSSLXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_14958T0/1-473 SLVYSGIKSI VKSSLDI--- ---------- ---------- ---------- ENSBTAP00000018305/1-875 SLVYAGIKSI VKSSLGMVES SRHNWSGLDK QSDIQNLNEE RILALQLCGW ENSP00000339881/1-875 SLVYAGIKSI VKSSLGMVES SRHNWSGLDK QSDIQNLNEE RILALQLCGW BACU000421/1-875 SLVYSGIKSI VKSSLGMVES SRHNWSGLDK QTDIQNLNEE RILALQLCGW 501 550 ENSTTRP00000012929/1-875 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_14958T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018305/1-875 IKKGTDVDVG PFLNSLVQEG EWERAAAVAL FNLDIRRAIQ ILNEGASSGK ENSP00000339881/1-875 IKKGTDVDVG PFLNSLVQEG EWERAAAVAL FNLDIRRAIQ ILNEGASSEK BACU000421/1-875 IKKGTDVDVG PFLNSLVQEG EWERAAAVAL FNLDIRRAIQ ILNEGASSER 551 600 ENSTTRP00000012929/1-875 XDLNLNVVAM ALSGYTDEKN SLWREMCSTL RLQLNNPYLC VMFAFLTSET bmy_14958T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018305/1-875 GDLNLNVVAM ALSGYTDEKN SLWREMCSTL RLQLNNPYLC IMFAFLTSEA ENSP00000339881/1-875 GDLNLNVVAM ALSGYTDEKN SLWREMCSTL RLQLNNPYLC VMFAFLTSET BACU000421/1-875 GDLNLNVVAM ALSGYTDEKN SLWREMCSTL RLQLNNPYLC VMFAFLTSET 601 650 ENSTTRP00000012929/1-875 GSYDGVLYEN KVAVRDRVAF ACKFLSDSQL NRYIEKLTNE MKEAGNLEGI bmy_14958T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018305/1-875 GSYDGVLYEN KVAVRDRVAF ACKFLSDSQL NRYIEKLTNE MKEAGNLEGI ENSP00000339881/1-875 GSYDGVLYEN KVAVRDRVAF ACKFLSDTQL NRYIEKLTNE MKEAGNLEGI BACU000421/1-875 GSYDGVLYEN KVAVRDRVAF ACKFLSDSQL NRYIEKLTNE MKEAGNLEGI 651 700 ENSTTRP00000012929/1-875 LLTGLTKDGV DLMESYVDRT GDVQTASYCM LQGSPLDVLK DERVQYWIEN bmy_14958T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018305/1-875 LLTGLTKDGV DLMESYVDRT GDVQTASYCM LQGSPLDVLK DERVQYWIEN ENSP00000339881/1-875 LLTGLTKDGV DLMESYVDRT GDVQTASYCM LQGSPLDVLK DERVQYWIEN BACU000421/1-875 LLTGLTKDGV DLMESYVDRT GDVQTASYCM LQGSPLDVLK DERVQYWIEN 701 750 ENSTTRP00000012929/1-875 YRNLLDAWRF WHKRAEFDIH RSKLDPSSKP LAQVFVSCNF CGKSISYSCS bmy_14958T0/1-473 FSELLR---- ---------- ---------- ---------- ---------- ENSBTAP00000018305/1-875 YRNLLDAWRF WHKRAEFDIH RSKLDPSSKP LAQVFVSCNF CGKSISYSCS ENSP00000339881/1-875 YRNLLDAWRF WHKRAEFDIH RSKLDPSSKP LAQVFVSCNF CGKSISYSCS BACU000421/1-875 YRNLLDAWRF WHKRAEFDIH RSKLDPSSKP LAQVFVSCNF CGKSISYSCS 751 800 ENSTTRP00000012929/1-875 TVPHQGRGFS QYGVSGSPTK SKVTSCPGCR KPLPRCALCL INMGTPVSSC bmy_14958T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018305/1-875 TVPHQGRGFS QYGVSGSPTK SKVTSCPGCR KPLPRCALCL INMGTPVSSC ENSP00000339881/1-875 AVPHQGRGFS QYGVSGSPTK SKVTSCPGCR KPLPRCALCL INMGTPVSSC BACU000421/1-875 TVPHQGRGFS QYGVSGSPTK SKVTSCPGCR KPLPRCALCL INMGTPVSSC 801 850 ENSTTRP00000012929/1-875 PGGSKSDEKV DLSKDKKLAQ FNNWFTWCHN CRHGGHAGHM LSWFRDHAEC bmy_14958T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018305/1-875 PGGSKSDEKV DLSKDKKLAQ FNNWFTWCHN CRHGGHAGHM LSWFRDHAEC ENSP00000339881/1-875 PGGTKSDEKV DLSKDKKLAQ FNNWFTWCHN CRHGGHAGHM LSWFRDHAEC BACU000421/1-875 PGGSKSDEKV DLSKDKKLAQ FNNWFTWCHN CRHGGHAGHM LSWFRDHAEC 851 900 ENSTTRP00000012929/1-875 PVSACTCKCM QLDTTGNLVP AETVQP bmy_14958T0/1-473 ---------- ---------- ------ ENSBTAP00000018305/1-875 PVSACTCKCM QLDTTGNLVP AETVQP ENSP00000339881/1-875 PVSACTCKCM QLDTTGNLVP AETVQP BACU000421/1-875 PVSACTCKCM QLDTTGNLVP AETVQP