KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:04:13 2014 Check: 00 ..
Name: ENSP00000338019/1-324 Len: 325 Check: 4584 Weight: 1.00
Name: ENSBTAP00000018327/1-278 Len: 325 Check: 6757 Weight: 1.00
Name: bmy_13382T0/1-325 Len: 325 Check: 6642 Weight: 1.00
Name: BACU019652/1-325 Len: 325 Check: 6816 Weight: 1.00
Name: ENSTTRP00000009526/1-325 Len: 325 Check: 7004 Weight: 1.00
//
1 50
ENSP00000338019/1-324 MASYYEILDV PRSASADDIK KAYRRKALQW HPDKNPDNKE FAEKKFKEVA
ENSBTAP00000018327/1-278 MASYYEILDV PRSASADDIK KAYRKKALQW HPDKNPDNKE FAEKKFKEVA
bmy_13382T0/1-325 MASYYEILDV PRSASADDIK KAYRKKALQW HPDKNPDNKE FAEKKFKEVA
BACU019652/1-325 MASYYEILDV PRSASADDIK KAYRKKALQW HPDKNPDNKE FAEKKFKEVA
ENSTTRP00000009526/1-325 MASYYEILDV PRSASADDIK KAYRKKALQW HPDKNPDNKE FAEKKFKEVA
51 100
ENSP00000338019/1-324 EAYEVLSDKH KREIYDRYGR EGLTGTGTGP SRAEAGSGGP GFTFTFRSPE
ENSBTAP00000018327/1-278 EAYEVLSDKH KREIYDLYGR EGLTGAGTGP SRAEAGSGGP GFTFTFRSPE
bmy_13382T0/1-325 EAYEVLSDKH KREIYDHYGR EGLTGAGTGP CRAEAASGGP GFTFTFRSPE
BACU019652/1-325 EAYEVLSDKH KREIYDHYGR EGLTGAGTGP CRAEAGSGGP GFTFTFRSPE
ENSTTRP00000009526/1-325 EAYEVLSDKH KREIYDHYGR EGLTGAGTGP CRAEAGSGGP GFTFTFRSPE
101 150
ENSP00000338019/1-324 EVFREFFGSG DPFAELFDDL GPFSELQNRG SRHSGPFFTF SSSFPGHSDF
ENSBTAP00000018327/1-278 EVFREFFGSG DPFAELFDDL GPFSELQNRG SRHSGPFFTF SSSFPGHSDF
bmy_13382T0/1-325 EVFREFFGNG DPFAELFDDL GPFSELQNRS ARHSGPFFTF SSSFPGHSDF
BACU019652/1-325 EVFREFFGNG DPFAELFDDL GPFSELQNRS ARHSGPFFTF SSSFPGHSDF
ENSTTRP00000009526/1-325 EVFREFFGSG DPFAELFDDL GPFSELQNRS ARHSGPFFTF SSSFPGHSDF
151 200
ENSP00000338019/1-324 SSSSFSFSPG AGAFRSVSTS TTFVQGRRIT TRRIMENGQE RVEVEEDGQL
ENSBTAP00000018327/1-278 SSSSFSFSPG AGAFRSVSTS TTFVQGRRIT TRRIMENGQE RVEVEEDGQL
bmy_13382T0/1-325 SSSSFSFSPG AGAFRSVSTS TTFVQGRRIT TRRIMENGQE RVEVEEDGQL
BACU019652/1-325 SSSSFSFSPG AGAFRSVSTS TTFVQGRRIT TRRIMENGQE RVEVEEDGQL
ENSTTRP00000009526/1-325 SSSSFSFSPG AGAFRSVSTS TTFVQGRRIT TRRIMENGHE RVEVEEDGQL
201 250
ENSP00000338019/1-324 KSVTINGVPD DLALGLELSR REQQPSVTSR SGGTQVQQTP ASCPLDSDLS
ENSBTAP00000018327/1-278 KSVTINGIPD DLALGLELSR REQQQSVTSR SGATQVRQTP VSRPLDGSLS
bmy_13382T0/1-325 KSVTINGIPD DLALGLELSR REQQQSVTSR SGATQVRQTP VSRPPDSDLS
BACU019652/1-325 KSVTINGIPD DLALGLELSR REQQQSVTSR SGATQVRQTP VSRPPDSDLS
ENSTTRP00000009526/1-325 KSVTITGIPD DLALGLELSR REQQQSVTSR SGATQVRQTP VSRPPDSDLS
251 300
ENSP00000338019/1-324 E-DEDLQLAM AYSLSEMEAA GKKPAGGREA QHRRQGRPKA QHQDPGLGGT
ENSBTAP00000018327/1-278 EEDEDLQLAM AYSLSEMEAA GKKPAD---- ---------- ----------
bmy_13382T0/1-325 EDDEDLQLAM AYSLSEMEAA GKKPAGGRGA QRRRQGQPKA QNHHPGTGET
BACU019652/1-325 EDDEDLQLAM AYSLSEMEAA GKKPAGGRGA QRRRQGQPKA QNHHPGTGET
ENSTTRP00000009526/1-325 EDDEDLQLAM AYSLSEMEAA GKKPAGGRGA QRRRQGQPKA QNHDPGMGET
301 350
ENSP00000338019/1-324 QEGARGEATK RSPSPEEKAS RCLIL
ENSBTAP00000018327/1-278 ---------- ---------- ---VF
bmy_13382T0/1-325 HEGARGDTAK PSPSPEEKAS RCLIL
BACU019652/1-325 HEGARGDTAK PSPSPEEKAS RCLIL
ENSTTRP00000009526/1-325 HEGARGDTAK PSPSPEEKAS RCLIL