KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:21 2014 Check: 00 .. Name: ENSTTRP00000016427/1-480 Len: 594 Check: 4280 Weight: 1.00 Name: ENSP00000369162/1-568 Len: 594 Check: 5954 Weight: 1.00 Name: ENSBTAP00000018366/1-568 Len: 594 Check: 4167 Weight: 1.00 Name: bmy_00860T0/1-573 Len: 594 Check: 7187 Weight: 1.00 Name: BACU005130/1-566 Len: 594 Check: 13 Weight: 1.00 // 1 50 ENSTTRP00000016427/1-480 MDYRRLLMSR VVPGQFDDAD SSDSENID-E TVXXXXXXXX XXXXXXXXXX ENSP00000369162/1-568 MDYRRLLMSR VVPGQFDDAD SSDSENRDLK TVKEKDDILF EDLQDNVNEN ENSBTAP00000018366/1-568 MDYRRLLMSR VVPGQFDDAD SSDSENIDLK TLKEEDDVVF EDLQSNASEK bmy_00860T0/1-573 MDYRRLLMSQ VVPGQFDDAD SSDSENIDLK TVKEEGDILF EDHQNNMNEM BACU005130/1-566 MDYRRLLMSR VVPGQFDDAD SSDSENIDLK TVKEEGDILF EDLQNNVNEK 51 100 ENSTTRP00000016427/1-480 XXXXXXXXXX XXXX-XXXXX XXXXXXXXXX XXXXXXXXXX XXXANRQTPS ENSP00000369162/1-568 -GEGEIEDEE EEGYDDDDDD WDWDEGVGKL AKGYVWNGGS NPQANRQTSD ENSBTAP00000018366/1-568 MGESELEEEE GGDF-DDDDD WAWGDGVRKL TRCYASGGGS NPQANRQTPS bmy_00860T0/1-573 MGEGEIEREE EEDY-DDDDD WDWDDGFGKL TRCSASGGGS NQQANRQTPS BACU005130/1-566 MGEGEIEREE EEDY-DDDDD WDWDDGFGKL TRCSASGGGS NQQANRQTPS 101 150 ENSTTRP00000016427/1-480 YNSAKMSTPS DKVLRKFENK INLEKLNVTD SVINKVTGKF RQKEADMYRI ENSP00000369162/1-568 SSSAKMSTPA DKVLRKFENK INLDKLNVTD SVINKVTEKS RQKEADMYRI ENSBTAP00000018366/1-568 FNAAKMSTPA DKVLRKFENK INLDKLNVTD SVINKVTEKS RQKEADMYRI bmy_00860T0/1-573 CNSAKMSTPS DKVLRKFENK INLEKLNVTD SVINKVTGKF RQKEADMYRI BACU005130/1-566 CNSAKMSTPS DKVLRKFENK INLEKLNVTD SVINKVTGKF RQKEADMYRI 151 200 ENSTTRP00000016427/1-480 KDKSDRATVE QVLDPRTRMI LFKMLMRGII LEINGCISTG KEANVYHART ENSP00000369162/1-568 KDKADRATVE QVLDPRTRMI LFKMLTRGII TEINGCISTG KEANVYHAST ENSBTAP00000018366/1-568 KDKADRATVE QVLDPRTRMI LFKMLTRGII AEINGCISTG KEANVYHART bmy_00860T0/1-573 KDKADRATVE QVLDPRTRMI LFKMLTRGII SEINGCISTG KEANVYHART BACU005130/1-566 KDKADRATVE QVLDPRTRMI LFKMLTRGVI SEINGCISTG KEANVYHART 201 250 ENSTTRP00000016427/1-480 ANGESRAIKI YKTSILVFKD RDKYVSGEFR FRHGYCKGNP RKMVKTWAEK ENSP00000369162/1-568 ANGESRAIKI YKTSILVFKD RDKYVSGEFR FRHGYCKGNP RKMVKTWAEK ENSBTAP00000018366/1-568 ANGESRAIKI YKTSILVFKD RDKYVSGEFR FRHGYCKGNP RKMVKTWAEK bmy_00860T0/1-573 TNGESRAIKI YKTSILVFKD RDKYVSGEFR FRHGYCKGNP RKMVKTWAEK BACU005130/1-566 TNGESRAIKI YKTSILVFKD RDKYVSGEF- ---------- ---------- 251 300 ENSTTRP00000016427/1-480 EMRNLIRLNT AEIPCPEPIL LRSHVLVMSF IGKDDMPAPL LKNVQLSESK ENSP00000369162/1-568 EMRNLIRLNT AEIPCPEPIM LRSHVLVMSF IGKDDMPAPL LKNVQLSESK ENSBTAP00000018366/1-568 EMRNLIRLNT AEIPCPEPIL LRSHVLVMSF IGKDDMPAPL LKNVQLSESK bmy_00860T0/1-573 EMRNLIRLST AEIPCPEPIL LRSHVLVMGF IGKDDMPAPL LKNVQLSESK BACU005130/1-566 ------RLNT AEIPCPEPIL LRSHVLVMGF IGKDDMPAPL LKNVQLSESK 301 350 ENSTTRP00000016427/1-480 ARELYVQVIE YMRRMYQDAR LVHADLSEFN MLYQGGGVCI IDVSQSVEHD ENSP00000369162/1-568 ARELYLQVIQ YMRRMYQDAR LVHADLSEFN MLYHGGGVYI IDVSQSVEHD ENSBTAP00000018366/1-568 ARELYMQVIE YMRRMYQDAR LVHADLSEFN MLYHGGGVYI IDVSQSVEHD bmy_00860T0/1-573 ARELYVQVIE YMRRMYQDAR LVHADLSEFN MLYQGGGVCI IDVSQSVEHD BACU005130/1-566 ARELYVQVIE YMRRMYQDAR LVHADLSEFN MLYQGGGVCI IDVSQSVEHD 351 400 ENSTTRP00000016427/1-480 HPHALEFLRK DCANVNGFFL KHGVAVMTVR ELFEFVTDPS VTHENVDAYL ENSP00000369162/1-568 HPHALEFLRK DCANVNDFFM RHSVAVMTVR ELFEFVTDPS ITHENMDAYL ENSBTAP00000018366/1-568 HPHALEFLRK DCANVNDFFL KHGVAVMTVR ELFEFVTDPS ITSENMDAYL bmy_00860T0/1-573 HPHALEFLRK DCANVNDFFL KHGVAVMTVR ELFEFVTDPS VTHENVDAYL BACU005130/1-566 HPHALEFLRK DCANVNDFFL KHGVAVMTVR ELFEFVTDPS VTHENVDAYL 401 450 ENSTTRP00000016427/1-480 AKAMEIASQR TKEERSSQDH VDEEVFKRAY IPRTLNEVKN YERDVDIMMK ENSP00000369162/1-568 SKAMEIASQR TKEERSSQDH VDEEVFKRAY IPRTLNEVKN YERDMDIIMK ENSBTAP00000018366/1-568 SKAMEIASQR TKEERSSQDH VDEEVFKRAY IPRTLNEVKN YERDMDIMMK bmy_00860T0/1-573 AKAMEIASQR TKEEMSSQDH VDEEVFKRAY IPRTLNEVKN YERDMDIMMK BACU005130/1-566 AKAMDIASQR TKEEMSSQDH VDEEVFKRAY IPRTLNEVKN YERDMDIMMK 451 500 ENSTTRP00000016427/1-480 LKEEDMAMNA QQDNILYQTV TGLKKDLSGV QK-------- ---------- ENSP00000369162/1-568 LKEEDMAMNA QQDNILYQTV TGLKKDLSGV QKVPALL--- --ENQVEERT ENSBTAP00000018366/1-568 LKEEDMAMNA QQDNILYQTV TGLKKDLSGV QKVPALL--- --ESQVQEET bmy_00860T0/1-573 LKEEDMAMNA QQDNILYQTV TGLKKDLSGV QKVPALLESQ IKESQVKEKT BACU005130/1-566 LKEEDMAMNA QQDNILYQTV TGLKKDLSGV QKVPALLESQ IKESQVKEKT 501 550 ENSTTRP00000016427/1-480 ---------- ---------- ---------- ---------- ---------- ENSP00000369162/1-568 CSDSEDIGSS ECSDTDSEEQ GDHARPKKHT TDPDIDKKER KKMVKE--AQ ENSBTAP00000018366/1-568 RSDSEDAGSA ECSDTDSEEQ GDHAGSRRPP ADLEVDRKER KKMVKE--AQ bmy_00860T0/1-573 XSDSEDARSS QCSDTDSEEQ GDNACSRKPT ADLEVDKKER KKMVKE--AQ BACU005130/1-566 CSDSEDARSS QCSDTDSEEQ GDNACSRKPT ADLEVDKKSP APHPKALLTL 551 600 ENSTTRP00000016427/1-480 ---------- ---------- ---------- ---------- ---- ENSP00000369162/1-568 REKRKNKIPK HVKKR----- ---------- ---KEKTAKT KKGK ENSBTAP00000018366/1-568 REKRKNKIPK HVKKR----- ---------- ---KEKAAKM KRGK bmy_00860T0/1-573 REKRKNKVPK HVKKR----- ---------- ---KEKTAKT KKGK BACU005130/1-566 RLEQPAPLPA ALPGRVTVTS HHSTSWGLCQ YLSNEEIRSI VDGE